RNA–Protein interactions for RNA: ENST00000545718.2

SCAP-215, Transcript of SREBF chaperone, humanhuman

TSL 5 BASIC

Gene SCAP, Length 2,950 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-215ENST00000545718 HECW2Q9P2P5 1572 aa20.31■□□□□ 0.84
SCAP-215ENST00000545718 LAS1LQ9Y4W2 734 aaKnown RBP20.31■□□□□ 0.84
SCAP-215ENST00000545718 RPGRIP1LQ68CZ1 1315 aa20.3■□□□□ 0.84
SCAP-215ENST00000545718 TCP11L2Q8N4U5 519 aa20.3■□□□□ 0.84
SCAP-215ENST00000545718 TRMT2AQ8IZ69 625 aaKnown RBP20.29■□□□□ 0.84
SCAP-215ENST00000545718 IFT172Q9UG01 1749 aa20.29■□□□□ 0.84
SCAP-215ENST00000545718 RTL5Q5HYW3 569 aaPredicted RBP20.29■□□□□ 0.84
SCAP-215ENST00000545718 CFAP53Q96M91 514 aa20.29■□□□□ 0.84
SCAP-215ENST00000545718 ABCC3O15438 1527 aa20.28■□□□□ 0.84
SCAP-215ENST00000545718 U2AF1L5P0DN76 240 aaPredicted RBP20.28■□□□□ 0.84
SCAP-215ENST00000545718 U2AF1Q01081 240 aaKnown RBP eCLIP20.28■□□□□ 0.84
SCAP-215ENST00000545718 POLR3AO14802 1390 aaPredicted RBP20.28■□□□□ 0.84
SCAP-215ENST00000545718 KDM2BQ8NHM5 1336 aa20.28■□□□□ 0.84
SCAP-215ENST00000545718 BCL2L13Q9BXK5 485 aa20.28■□□□□ 0.84
SCAP-215ENST00000545718 PANK1Q8TE04 598 aa20.27■□□□□ 0.83
SCAP-215ENST00000545718 RUNDC1Q96C34 613 aa20.27■□□□□ 0.83
SCAP-215ENST00000545718 STAG3Q9UJ98 1225 aa20.27■□□□□ 0.83
SCAP-215ENST00000545718 COG6Q9Y2V7 657 aa20.26■□□□□ 0.83
SCAP-215ENST00000545718 MINK1Q8N4C8 1332 aaPredicted RBP20.26■□□□□ 0.83
SCAP-215ENST00000545718 DEKP35659 375 aaKnown RBP20.26■□□□□ 0.83
SCAP-215ENST00000545718 POGKQ9P215 609 aa20.25■□□□□ 0.83
SCAP-215ENST00000545718 QRICH2Q9H0J4 1663 aa20.25■□□□□ 0.83
SCAP-215ENST00000545718 U2SURPO15042 1029 aaKnown RBP20.24■□□□□ 0.83
SCAP-215ENST00000545718 GGNBP2Q9H3C7 697 aa20.24■□□□□ 0.83
SCAP-215ENST00000545718 CFAP74Q9C0B2 1584 aa20.24■□□□□ 0.83
SCAP-215ENST00000545718 ADGRB1O14514 1584 aa20.24■□□□□ 0.83
SCAP-215ENST00000545718 SETBP1Q9Y6X0 1596 aa20.23■□□□□ 0.83
SCAP-215ENST00000545718 FBXO31Q5XUX0 539 aaPredicted RBP20.23■□□□□ 0.83
SCAP-215ENST00000545718 PPLO60437 1756 aa20.23■□□□□ 0.83
SCAP-215ENST00000545718 YEATS2Q9ULM3 1422 aa20.23■□□□□ 0.83
SCAP-215ENST00000545718 SLC4A3P48751 1232 aa20.21■□□□□ 0.83
SCAP-215ENST00000545718 NGEFQ8N5V2 710 aa20.21■□□□□ 0.83
SCAP-215ENST00000545718 CLUAP1Q96AJ1 413 aa20.21■□□□□ 0.83
SCAP-215ENST00000545718 MYO3AQ8NEV4 1616 aa20.21■□□□□ 0.83
SCAP-215ENST00000545718 PRAM1Q96QH2 718 aa20.2■□□□□ 0.82
SCAP-215ENST00000545718 BCL11AQ9H165 835 aa20.2■□□□□ 0.82
SCAP-215ENST00000545718 SLC52A1Q9NWF4 448 aa20.19■□□□□ 0.82
SCAP-215ENST00000545718 CAMSAP1Q5T5Y3 1602 aa20.19■□□□□ 0.82
SCAP-215ENST00000545718 DAXXQ9UER7 740 aaPredicted RBP20.19■□□□□ 0.82
SCAP-215ENST00000545718 IGHDP01880 384 aa20.18■□□□□ 0.82
SCAP-215ENST00000545718 GLI2P10070 1586 aa20.18■□□□□ 0.82
SCAP-215ENST00000545718 MLECQ14165 292 aa20.18■□□□□ 0.82
SCAP-215ENST00000545718 FAM69CQ0P6D2 419 aa20.18■□□□□ 0.82
SCAP-215ENST00000545718 FAM161AQ3B820 660 aa20.18■□□□□ 0.82
SCAP-215ENST00000545718 NEO1Q92859 1461 aa20.18■□□□□ 0.82
SCAP-215ENST00000545718 TNNQ9UQP3 1299 aa20.17■□□□□ 0.82
SCAP-215ENST00000545718 ANKRD36BQ8N2N9 1353 aa20.17■□□□□ 0.82
SCAP-215ENST00000545718 SIGLEC1Q9BZZ2 1709 aa20.17■□□□□ 0.82
SCAP-215ENST00000545718 RARSP54136 660 aaKnown RBP20.15■□□□□ 0.82
SCAP-215ENST00000545718 DIP2CQ9Y2E4 1556 aa20.15■□□□□ 0.82
SCAP-215ENST00000545718 PPM1GO15355 546 aaPredicted RBP20.15■□□□□ 0.82
SCAP-215ENST00000545718 NEFMP07197 916 aa20.15■□□□□ 0.82
SCAP-215ENST00000545718 PDE3AQ14432 1141 aa20.15■□□□□ 0.82
SCAP-215ENST00000545718 TULP4Q9NRJ4 1543 aa20.14■□□□□ 0.82
SCAP-215ENST00000545718 A0A1W2PP64 1363 aa20.14■□□□□ 0.82
SCAP-215ENST00000545718 DDRGK1Q96HY6 314 aa20.14■□□□□ 0.81
SCAP-215ENST00000545718 NEXMIFQ5QGS0 1516 aa20.14■□□□□ 0.81
SCAP-215ENST00000545718 TSR2Q969E8 191 aaKnown RBP20.13■□□□□ 0.81
SCAP-215ENST00000545718 C8orf34Q49A92 452 aa20.13■□□□□ 0.81
SCAP-215ENST00000545718 TERF2IPQ9NYB0 399 aa20.12■□□□□ 0.81
SCAP-215ENST00000545718 WDR63Q8IWG1 891 aa20.12■□□□□ 0.81
SCAP-215ENST00000545718 RLBP1P12271 317 aa20.11■□□□□ 0.81
SCAP-215ENST00000545718 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.11■□□□□ 0.81
SCAP-215ENST00000545718 ZC3H13Q5T200 1668 aaKnown RBP20.11■□□□□ 0.81
SCAP-215ENST00000545718 MAPK8IP3Q9UPT6 1336 aa20.1■□□□□ 0.81
SCAP-215ENST00000545718 MYH16Q9H6N6 1097 aa20.1■□□□□ 0.81
SCAP-215ENST00000545718 CABP1Q9NZU7 370 aa20.09■□□□□ 0.81
SCAP-215ENST00000545718 FBLN1P23142 703 aa20.09■□□□□ 0.81
SCAP-215ENST00000545718 CDK19Q9BWU1 502 aa20.09■□□□□ 0.81
SCAP-215ENST00000545718 SHPRHQ149N8 1683 aa20.09■□□□□ 0.81
SCAP-215ENST00000545718 FYB1O15117 783 aa20.08■□□□□ 0.81
SCAP-215ENST00000545718 HDGFL2Q7Z4V5 671 aaPredicted RBP20.08■□□□□ 0.8
SCAP-215ENST00000545718 ARHGEF28Q8N1W1 1705 aaKnown RBP20.08■□□□□ 0.8
SCAP-215ENST00000545718 PUS7Q96PZ0 661 aaKnown RBP20.07■□□□□ 0.8
SCAP-215ENST00000545718 WAPLQ7Z5K2 1190 aa20.07■□□□□ 0.8
SCAP-215ENST00000545718 FTSJ3Q8IY81 847 aaKnown RBP20.07■□□□□ 0.8
SCAP-215ENST00000545718 PIK3C2BO00750 1634 aa20.06■□□□□ 0.8
SCAP-215ENST00000545718 NSD2O96028 1365 aa20.06■□□□□ 0.8
SCAP-215ENST00000545718 ARHGAP31Q2M1Z3 1444 aa20.06■□□□□ 0.8
SCAP-215ENST00000545718 PHF23Q9BUL5 403 aaPredicted RBP20.06■□□□□ 0.8
SCAP-215ENST00000545718 PCDHB15Q9Y5E8 787 aa20.05■□□□□ 0.8
SCAP-215ENST00000545718 YTHDC2Q9H6S0 1430 aaKnown RBP20.05■□□□□ 0.8
SCAP-215ENST00000545718 EXOSC9Q06265 439 aaKnown RBP20.04■□□□□ 0.8
SCAP-215ENST00000545718 SMC4Q9NTJ3 1288 aa20.04■□□□□ 0.8
SCAP-215ENST00000545718 ATAD2Q6PL18 1390 aa20.04■□□□□ 0.8
SCAP-215ENST00000545718 ABCC11Q96J66 1382 aa20.04■□□□□ 0.8
SCAP-215ENST00000545718 TMPOP42166 694 aaKnown RBP20.04■□□□□ 0.8
SCAP-215ENST00000545718 CCDC27Q2M243 656 aa20.04■□□□□ 0.8
SCAP-215ENST00000545718 IQSEC2Q5JU85 1478 aa20.03■□□□□ 0.8
SCAP-215ENST00000545718 MYO5BQ9ULV0 1848 aa20.03■□□□□ 0.8
SCAP-215ENST00000545718 RIPK4P57078 832 aa20.02■□□□□ 0.8
SCAP-215ENST00000545718 NINLQ9Y2I6 1382 aa20.02■□□□□ 0.8
SCAP-215ENST00000545718 DIAPH1O60610 1272 aaKnown RBP20.02■□□□□ 0.8
SCAP-215ENST00000545718 RICTORQ6R327 1708 aa20.02■□□□□ 0.79
SCAP-215ENST00000545718 PMFBP1Q8TBY8 1022 aa20.01■□□□□ 0.79
SCAP-215ENST00000545718 ZKSCAN2Q63HK3 967 aa20■□□□□ 0.79
SCAP-215ENST00000545718 PTPRMP28827 1452 aa19.99■□□□□ 0.79
SCAP-215ENST00000545718 ZFYVE9O95405 1425 aa19.99■□□□□ 0.79
SCAP-215ENST00000545718 DZIP1LQ8IYY4 767 aaKnown RBP19.98■□□□□ 0.79
SCAP-215ENST00000545718 TRIM35Q9UPQ4 493 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms