RNA–Protein interactions for RNA: ENST00000545688.5

SNHG1-224, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3

Gene SNHG1, Length 610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-224ENST00000545688 SYMPKQ92797 1274 aaKnown RBP11.77□□□□□ -0.53
SNHG1-224ENST00000545688 FDX1P10109 184 aa11.76□□□□□ -0.53
SNHG1-224ENST00000545688 NDUFV2P19404 249 aa11.76□□□□□ -0.53
SNHG1-224ENST00000545688 SPRYD7Q5W111 196 aa11.76□□□□□ -0.53
SNHG1-224ENST00000545688 PCDHGC3Q9UN70 934 aa11.76□□□□□ -0.53
SNHG1-224ENST00000545688 MOXD2PA6NHM9 499 aa11.75□□□□□ -0.53
SNHG1-224ENST00000545688 GFRA3O60609 400 aa11.75□□□□□ -0.53
SNHG1-224ENST00000545688 MMP16P51512 607 aa11.73□□□□□ -0.53
SNHG1-224ENST00000545688 ZNF598Q86UK7 904 aaKnown RBP11.73□□□□□ -0.53
SNHG1-224ENST00000545688 TBC1D2Q9BYX2 928 aa11.73□□□□□ -0.53
SNHG1-224ENST00000545688 DXOO77932 396 aaKnown RBP11.71□□□□□ -0.53
SNHG1-224ENST00000545688 LAPTM4AQ15012 233 aa11.71□□□□□ -0.53
SNHG1-224ENST00000545688 ZNF697Q5TEC3 545 aa11.71□□□□□ -0.53
SNHG1-224ENST00000545688 TRIM67Q6ZTA4 783 aa11.71□□□□□ -0.53
SNHG1-224ENST00000545688 PDZRN3Q9UPQ7 1066 aa11.71□□□□□ -0.53
SNHG1-224ENST00000545688 C6orf229H3BNL8 230 aa11.7□□□□□ -0.54
SNHG1-224ENST00000545688 RETREG3Q86VR2 466 aa11.7□□□□□ -0.54
SNHG1-224ENST00000545688 NRG2O14511 850 aaPredicted RBP11.69□□□□□ -0.54
SNHG1-224ENST00000545688 Q6ZNB5 142 aa11.69□□□□□ -0.54
SNHG1-224ENST00000545688 RPIAP49247 311 aa11.68□□□□□ -0.54
SNHG1-224ENST00000545688 JUNDP17535 347 aa11.67□□□□□ -0.54
SNHG1-224ENST00000545688 DIXDC1Q155Q3 683 aa11.67□□□□□ -0.54
SNHG1-224ENST00000545688 RSBN1LQ6PCB5 846 aaPredicted RBP11.67□□□□□ -0.54
SNHG1-224ENST00000545688 CCDC24Q8N4L8 307 aa11.64□□□□□ -0.55
SNHG1-224ENST00000545688 PCDHB15Q9Y5E8 787 aa11.64□□□□□ -0.55
SNHG1-224ENST00000545688 TNFRSF10AO00220 468 aa11.63□□□□□ -0.55
SNHG1-224ENST00000545688 SPTLC1O15269 473 aa11.63□□□□□ -0.55
SNHG1-224ENST00000545688 ZBTB24O43167 697 aaPredicted RBP11.63□□□□□ -0.55
SNHG1-224ENST00000545688 GDF9O60383 454 aa11.63□□□□□ -0.55
SNHG1-224ENST00000545688 GJA5P36382 358 aa11.63□□□□□ -0.55
SNHG1-224ENST00000545688 MTMR2Q13614 643 aa11.63□□□□□ -0.55
SNHG1-224ENST00000545688 CD2BP2O95400 341 aaKnown RBP11.62□□□□□ -0.55
SNHG1-224ENST00000545688 PRR20EP86478 221 aa11.62□□□□□ -0.55
SNHG1-224ENST00000545688 PRR20CP86479 221 aa11.62□□□□□ -0.55
SNHG1-224ENST00000545688 PRR20DP86480 221 aa11.62□□□□□ -0.55
SNHG1-224ENST00000545688 PRR20BP86481 221 aa11.62□□□□□ -0.55
SNHG1-224ENST00000545688 PRR20AP86496 221 aa11.62□□□□□ -0.55
SNHG1-224ENST00000545688 MYSM1Q5VVJ2 828 aa11.62□□□□□ -0.55
SNHG1-224ENST00000545688 RIC3Q7Z5B4 369 aa11.62□□□□□ -0.55
SNHG1-224ENST00000545688 GPBP1L1Q9HC44 474 aaPredicted RBP11.62□□□□□ -0.55
SNHG1-224ENST00000545688 FOXC1Q12948 553 aa11.61□□□□□ -0.55
SNHG1-224ENST00000545688 PRR7Q8TB68 274 aa11.61□□□□□ -0.55
SNHG1-224ENST00000545688 PKD2L1Q9P0L9 805 aa11.61□□□□□ -0.55
SNHG1-224ENST00000545688 LCE2BO14633 110 aa11.6□□□□□ -0.55
SNHG1-224ENST00000545688 LIMD1Q9UGP4 676 aa11.6□□□□□ -0.55
SNHG1-224ENST00000545688 SPDYE5A6NIY4 337 aa11.59□□□□□ -0.55
SNHG1-224ENST00000545688 TRIM32Q13049 653 aa11.59□□□□□ -0.55
SNHG1-224ENST00000545688 CSPP1Q1MSJ5 1256 aa11.59□□□□□ -0.55
SNHG1-224ENST00000545688 NUDT12Q9BQG2 462 aa11.59□□□□□ -0.55
SNHG1-224ENST00000545688 KDM4CQ9H3R0 1056 aa11.59□□□□□ -0.55
SNHG1-224ENST00000545688 HRCP23327 699 aa11.58□□□□□ -0.56
SNHG1-224ENST00000545688 CABLES1Q8TDN4 633 aa11.58□□□□□ -0.56
SNHG1-224ENST00000545688 ZBTB3Q9H5J0 574 aa11.57□□□□□ -0.56
SNHG1-224ENST00000545688 CFAP99D6REC4 459 aa11.55□□□□□ -0.56
SNHG1-224ENST00000545688 PTPRNQ16849 979 aa11.55□□□□□ -0.56
SNHG1-224ENST00000545688 PRPF38BQ5VTL8 546 aaKnown RBP11.55□□□□□ -0.56
SNHG1-224ENST00000545688 PTCRAQ6ISU1 281 aaPredicted RBP11.55□□□□□ -0.56
SNHG1-224ENST00000545688 TRAF7Q6Q0C0 670 aa11.55□□□□□ -0.56
SNHG1-224ENST00000545688 CCNYL3P0C7X3 344 aa11.54□□□□□ -0.56
SNHG1-224ENST00000545688 DESI1Q6ICB0 168 aa11.54□□□□□ -0.56
SNHG1-224ENST00000545688 FAM117AQ9C073 453 aa11.54□□□□□ -0.56
SNHG1-224ENST00000545688 CLK2P49760 499 aaKnown RBP11.53□□□□□ -0.56
SNHG1-224ENST00000545688 QPCTQ16769 361 aa11.53□□□□□ -0.56
SNHG1-224ENST00000545688 FAM187AA6NFU0 413 aa11.52□□□□□ -0.57
SNHG1-224ENST00000545688 TUSC1Q2TAM9 212 aa11.52□□□□□ -0.57
SNHG1-224ENST00000545688 RSPH6AQ9H0K4 717 aa11.52□□□□□ -0.57
SNHG1-224ENST00000545688 POLR3EQ9NVU0 708 aa11.52□□□□□ -0.57
SNHG1-224ENST00000545688 WNT7AO00755 349 aa11.51□□□□□ -0.57
SNHG1-224ENST00000545688 SKOR1P84550 965 aa11.51□□□□□ -0.57
SNHG1-224ENST00000545688 PKDCCQ504Y2 493 aa11.51□□□□□ -0.57
SNHG1-224ENST00000545688 LILRB3O75022 631 aa11.5□□□□□ -0.57
SNHG1-224ENST00000545688 DGAT1O75907 488 aa11.5□□□□□ -0.57
SNHG1-224ENST00000545688 EVA1BQ9NVM1 165 aa11.5□□□□□ -0.57
SNHG1-224ENST00000545688 NUTM2BA6NNL0 878 aaPredicted RBP11.49□□□□□ -0.57
SNHG1-224ENST00000545688 NUTM2EB1AL46 878 aaPredicted RBP11.49□□□□□ -0.57
SNHG1-224ENST00000545688 NUTM2DQ5VT03 806 aaPredicted RBP11.49□□□□□ -0.57
SNHG1-224ENST00000545688 NUTM2AQ8IVF1 878 aaPredicted RBP11.49□□□□□ -0.57
SNHG1-224ENST00000545688 DDRGK1Q96HY6 314 aa11.49□□□□□ -0.57
SNHG1-224ENST00000545688 TOR4AQ9NXH8 423 aa11.49□□□□□ -0.57
SNHG1-224ENST00000545688 PLEKHG3A1L390 1219 aa11.48□□□□□ -0.57
SNHG1-224ENST00000545688 WNT7BP56706 349 aa11.48□□□□□ -0.57
SNHG1-224ENST00000545688 KCNH2Q12809 1159 aa11.48□□□□□ -0.57
SNHG1-224ENST00000545688 LYPD8Q6UX82 237 aa11.48□□□□□ -0.57
SNHG1-224ENST00000545688 CYP4X1Q8N118 509 aa11.48□□□□□ -0.57
SNHG1-224ENST00000545688 TPRNQ4KMQ1 711 aa11.47□□□□□ -0.57
SNHG1-224ENST00000545688 RTL5Q5HYW3 569 aaPredicted RBP11.47□□□□□ -0.57
SNHG1-224ENST00000545688 TSC1Q92574 1164 aa11.47□□□□□ -0.57
SNHG1-224ENST00000545688 MRGPRX2Q96LB1 330 aa11.47□□□□□ -0.57
SNHG1-224ENST00000545688 UNC93B1Q9H1C4 597 aa11.47□□□□□ -0.57
SNHG1-224ENST00000545688 RC3H1Q5TC82 1133 aaKnown RBP11.46□□□□□ -0.57
SNHG1-224ENST00000545688 PER1O15534 1290 aaPredicted RBP11.45□□□□□ -0.58
SNHG1-224ENST00000545688 MYT1Q01538 1121 aa11.45□□□□□ -0.58
SNHG1-224ENST00000545688 SH3D19Q5HYK7 790 aa11.45□□□□□ -0.58
SNHG1-224ENST00000545688 TTC24A2A3L6 582 aaPredicted RBP11.44□□□□□ -0.58
SNHG1-224ENST00000545688 CTHP32929 405 aa11.44□□□□□ -0.58
SNHG1-224ENST00000545688 SKIV2LQ15477 1246 aaKnown RBP11.44□□□□□ -0.58
SNHG1-224ENST00000545688 NEUROD2Q15784 382 aa11.44□□□□□ -0.58
SNHG1-224ENST00000545688 LINC01559Q495D7 138 aa11.44□□□□□ -0.58
SNHG1-224ENST00000545688 MAP10Q9P2G4 905 aa11.44□□□□□ -0.58
SNHG1-224ENST00000545688 F12P00748 615 aaPredicted RBP11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms