RNA–Protein interactions for RNA: ENST00000545377.5

ARHGEF28-214, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ARHGEF28, Length 6,351 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-214ENST00000545377 DDX54Q8TDD1 881 aaKnown RBP21.04■□□□□ 0.96
ARHGEF28-214ENST00000545377 RAPGEF2Q9Y4G8 1499 aa21.04■□□□□ 0.96
ARHGEF28-214ENST00000545377 IBSPP21815 317 aaPredicted RBP21.04■□□□□ 0.96
ARHGEF28-214ENST00000545377 REC8O95072 547 aa21.03■□□□□ 0.96
ARHGEF28-214ENST00000545377 GGNBP2Q9H3C7 697 aa21.03■□□□□ 0.96
ARHGEF28-214ENST00000545377 ERC2O15083 957 aa21.02■□□□□ 0.96
ARHGEF28-214ENST00000545377 STK11IPQ8N1F8 1099 aa21.02■□□□□ 0.96
ARHGEF28-214ENST00000545377 DDX11L8A8MPP1 907 aa21.02■□□□□ 0.95
ARHGEF28-214ENST00000545377 RRP12Q5JTH9 1297 aaKnown RBP21.01■□□□□ 0.95
ARHGEF28-214ENST00000545377 TXNDC2Q86VQ3 553 aa21.01■□□□□ 0.95
ARHGEF28-214ENST00000545377 TBC1D2BQ9UPU7 963 aa21.01■□□□□ 0.95
ARHGEF28-214ENST00000545377 DNAJC2Q99543 621 aaKnown RBP21.01■□□□□ 0.95
ARHGEF28-214ENST00000545377 CRBNQ96SW2 442 aa21.01■□□□□ 0.95
ARHGEF28-214ENST00000545377 HSP90AB2PQ58FF8 381 aa21■□□□□ 0.95
ARHGEF28-214ENST00000545377 DHX57Q6P158 1386 aaKnown RBP21■□□□□ 0.95
ARHGEF28-214ENST00000545377 TOM1L2Q6ZVM7 507 aa21■□□□□ 0.95
ARHGEF28-214ENST00000545377 DDX19BQ9UMR2 479 aa21■□□□□ 0.95
ARHGEF28-214ENST00000545377 ROCK1Q13464 1354 aa21■□□□□ 0.95
ARHGEF28-214ENST00000545377 HSP90AB4PQ58FF6 505 aa20.99■□□□□ 0.95
ARHGEF28-214ENST00000545377 TMEM132EQ6IEE7 984 aa20.99■□□□□ 0.95
ARHGEF28-214ENST00000545377 CNNM1Q9NRU3 951 aa20.99■□□□□ 0.95
ARHGEF28-214ENST00000545377 FAM161AQ3B820 660 aa20.99■□□□□ 0.95
ARHGEF28-214ENST00000545377 UBTFL1P0CB47 393 aaPredicted RBP20.99■□□□□ 0.95
ARHGEF28-214ENST00000545377 CADPSQ9ULU8 1353 aa20.99■□□□□ 0.95
ARHGEF28-214ENST00000545377 OFD1O75665 1012 aa20.98■□□□□ 0.95
ARHGEF28-214ENST00000545377 SMC3Q9UQE7 1217 aa20.98■□□□□ 0.95
ARHGEF28-214ENST00000545377 HOMER1Q86YM7 354 aa20.98■□□□□ 0.95
ARHGEF28-214ENST00000545377 CENPQQ7L2Z9 268 aaPredicted RBP20.98■□□□□ 0.95
ARHGEF28-214ENST00000545377 XBP1P17861 261 aa20.98■□□□□ 0.95
ARHGEF28-214ENST00000545377 DZIP1LQ8IYY4 767 aaKnown RBP20.97■□□□□ 0.95
ARHGEF28-214ENST00000545377 SETQ01105 290 aaPredicted RBP20.97■□□□□ 0.95
ARHGEF28-214ENST00000545377 ATP2B1P20020 1258 aa20.97■□□□□ 0.95
ARHGEF28-214ENST00000545377 GNAI1P63096 354 aa20.96■□□□□ 0.95
ARHGEF28-214ENST00000545377 FSD1Q9BTV5 496 aa20.95■□□□□ 0.94
ARHGEF28-214ENST00000545377 SLC3A2P08195 630 aaKnown RBP20.95■□□□□ 0.94
ARHGEF28-214ENST00000545377 CDK5RAP3Q96JB5 506 aa20.95■□□□□ 0.94
ARHGEF28-214ENST00000545377 IPO9Q96P70 1041 aaKnown RBP20.95■□□□□ 0.94
ARHGEF28-214ENST00000545377 TATP17735 454 aaPredicted RBP20.94■□□□□ 0.94
ARHGEF28-214ENST00000545377 SART3Q15020 963 aaKnown RBP20.94■□□□□ 0.94
ARHGEF28-214ENST00000545377 CABP4P57796 275 aa20.93■□□□□ 0.94
ARHGEF28-214ENST00000545377 PLEKHO1Q53GL0 409 aaPredicted RBP20.93■□□□□ 0.94
ARHGEF28-214ENST00000545377 GPS2Q13227 327 aa20.93■□□□□ 0.94
ARHGEF28-214ENST00000545377 TTC39AQ5SRH9 613 aa20.93■□□□□ 0.94
ARHGEF28-214ENST00000545377 PAXIP1Q6ZW49 1069 aaPredicted RBP20.93■□□□□ 0.94
ARHGEF28-214ENST00000545377 KRT18P05783 430 aaKnown RBP20.93■□□□□ 0.94
ARHGEF28-214ENST00000545377 EXOC6Q8TAG9 804 aa20.93■□□□□ 0.94
ARHGEF28-214ENST00000545377 SASS6Q6UVJ0 657 aa20.92■□□□□ 0.94
ARHGEF28-214ENST00000545377 BICDL1Q6ZP65 573 aa20.92■□□□□ 0.94
ARHGEF28-214ENST00000545377 USP47Q96K76 1375 aa20.92■□□□□ 0.94
ARHGEF28-214ENST00000545377 RUNDC1Q96C34 613 aa20.92■□□□□ 0.94
ARHGEF28-214ENST00000545377 ZSCAN29Q8IWY8 852 aaPredicted RBP20.91■□□□□ 0.94
ARHGEF28-214ENST00000545377 MIA2Q96PC5 1412 aa20.91■□□□□ 0.94
ARHGEF28-214ENST00000545377 CCDC73Q6ZRK6 1079 aa20.91■□□□□ 0.94
ARHGEF28-214ENST00000545377 GNL3LQ9NVN8 582 aaKnown RBP20.91■□□□□ 0.94
ARHGEF28-214ENST00000545377 INTS3Q68E01 1043 aaKnown RBP20.9■□□□□ 0.94
ARHGEF28-214ENST00000545377 LNPKQ9C0E8 428 aa20.9■□□□□ 0.94
ARHGEF28-214ENST00000545377 BCL11BQ9C0K0 894 aaPredicted RBP20.9■□□□□ 0.94
ARHGEF28-214ENST00000545377 SMG6Q86US8 1419 aaKnown RBP20.89■□□□□ 0.93
ARHGEF28-214ENST00000545377 PDILTQ8N807 584 aa20.89■□□□□ 0.93
ARHGEF28-214ENST00000545377 MPHOSPH10O00566 681 aaKnown RBP20.89■□□□□ 0.93
ARHGEF28-214ENST00000545377 TTLL5Q6EMB2 1281 aa20.88■□□□□ 0.93
ARHGEF28-214ENST00000545377 MROH2BQ7Z745 1585 aa20.88■□□□□ 0.93
ARHGEF28-214ENST00000545377 OLFM4Q6UX06 510 aa20.87■□□□□ 0.93
ARHGEF28-214ENST00000545377 RUFY1Q96T51 708 aa20.87■□□□□ 0.93
ARHGEF28-214ENST00000545377 RRP1P56182 461 aaKnown RBP20.86■□□□□ 0.93
ARHGEF28-214ENST00000545377 CCDC30Q5VVM6 783 aa20.86■□□□□ 0.93
ARHGEF28-214ENST00000545377 NINLQ9Y2I6 1382 aa20.86■□□□□ 0.93
ARHGEF28-214ENST00000545377 CHMP4BP1P59074 171 aa20.86■□□□□ 0.93
ARHGEF28-214ENST00000545377 CNTROBQ8N137 903 aa20.86■□□□□ 0.93
ARHGEF28-214ENST00000545377 ZHX3Q9H4I2 956 aa20.86■□□□□ 0.93
ARHGEF28-214ENST00000545377 SURF6O75683 361 aaKnown RBP20.85■□□□□ 0.93
ARHGEF28-214ENST00000545377 MYL6BP14649 208 aa20.85■□□□□ 0.93
ARHGEF28-214ENST00000545377 SYCP1Q15431 976 aa20.85■□□□□ 0.93
ARHGEF28-214ENST00000545377 CCDC158Q5M9N0 1113 aa20.85■□□□□ 0.93
ARHGEF28-214ENST00000545377 XPCQ01831 940 aaPredicted RBP20.85■□□□□ 0.93
ARHGEF28-214ENST00000545377 SKOR2Q2VWA4 1001 aaPredicted RBP20.85■□□□□ 0.93
ARHGEF28-214ENST00000545377 SKIDA1Q1XH10 827 aa20.84■□□□□ 0.93
ARHGEF28-214ENST00000545377 VSIG10Q8N0Z9 540 aa20.84■□□□□ 0.93
ARHGEF28-214ENST00000545377 GAS2L2Q8NHY3 880 aa20.84■□□□□ 0.93
ARHGEF28-214ENST00000545377 CLASRPQ8N2M8 674 aaKnown RBP20.83■□□□□ 0.93
ARHGEF28-214ENST00000545377 PRDM2Q13029 1718 aa20.83■□□□□ 0.92
ARHGEF28-214ENST00000545377 FANCD2Q9BXW9 1451 aa20.83■□□□□ 0.92
ARHGEF28-214ENST00000545377 MYCNP04198 464 aaPredicted RBP20.82■□□□□ 0.92
ARHGEF28-214ENST00000545377 MPHOSPH8Q99549 860 aa20.82■□□□□ 0.92
ARHGEF28-214ENST00000545377 CCDC173Q0VFZ6 552 aa20.82■□□□□ 0.92
ARHGEF28-214ENST00000545377 SIL1Q9H173 461 aa20.82■□□□□ 0.92
ARHGEF28-214ENST00000545377 PDCL3Q9H2J4 239 aa20.81■□□□□ 0.92
ARHGEF28-214ENST00000545377 PRDM11Q9NQV5 511 aa20.81■□□□□ 0.92
ARHGEF28-214ENST00000545377 PDE4AP27815 886 aa20.81■□□□□ 0.92
ARHGEF28-214ENST00000545377 RDXP35241 583 aaKnown RBP20.81■□□□□ 0.92
ARHGEF28-214ENST00000545377 CAGE1Q8TC20 777 aa20.81■□□□□ 0.92
ARHGEF28-214ENST00000545377 PSMA5P28066 241 aa20.81■□□□□ 0.92
ARHGEF28-214ENST00000545377 THEMISQ8N1K5 641 aaPredicted RBP20.8■□□□□ 0.92
ARHGEF28-214ENST00000545377 MATR3P43243 847 aaKnown RBP eCLIP20.8■□□□□ 0.922e-6■■■■□ 20.2
ARHGEF28-214ENST00000545377 BRPF1P55201 1214 aaPredicted RBP20.8■□□□□ 0.92
ARHGEF28-214ENST00000545377 SPINK5Q9NQ38 1064 aaPredicted RBP20.8■□□□□ 0.92
ARHGEF28-214ENST00000545377 SDF4Q9BRK5 362 aa20.79■□□□□ 0.92
ARHGEF28-214ENST00000545377 PPM1FP49593 454 aaPredicted RBP20.79■□□□□ 0.92
ARHGEF28-214ENST00000545377 SPG7Q9UQ90 795 aa20.79■□□□□ 0.92
ARHGEF28-214ENST00000545377 PRAM1Q96QH2 718 aa20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 137.5 ms