RNA–Protein interactions for RNA: ENST00000545367.5

NPIPB4-221, Transcript of nuclear pore complex interacting protein family member B4, humanhuman

TSL 2

Gene NPIPB4, Length 846 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4-221ENST00000545367 CHGAP10645 457 aaKnown RBP13.49□□□□□ -0.25
NPIPB4-221ENST00000545367 RBM6P78332 1123 aaKnown RBP13.49□□□□□ -0.25
NPIPB4-221ENST00000545367 TBX22Q9Y458 520 aa13.49□□□□□ -0.25
NPIPB4-221ENST00000545367 COL22A1Q8NFW1 1626 aaPredicted RBP13.49□□□□□ -0.25
NPIPB4-221ENST00000545367 LRP5O75197 1615 aa13.48□□□□□ -0.25
NPIPB4-221ENST00000545367 ADGRL3Q9HAR2 1447 aa13.47□□□□□ -0.25
NPIPB4-221ENST00000545367 ANKRD50Q9ULJ7 1429 aa13.47□□□□□ -0.25
NPIPB4-221ENST00000545367 DDX17Q92841 729 aaKnown RBP13.46□□□□□ -0.25
NPIPB4-221ENST00000545367 BRWD3Q6RI45 1802 aa13.46□□□□□ -0.26
NPIPB4-221ENST00000545367 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.45□□□□□ -0.26
NPIPB4-221ENST00000545367 ADAMTS2O95450 1211 aa13.45□□□□□ -0.26
NPIPB4-221ENST00000545367 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.45□□□□□ -0.26
NPIPB4-221ENST00000545367 QTRT2Q9H974 415 aaKnown RBP13.45□□□□□ -0.26
NPIPB4-221ENST00000545367 HDGFP51858 240 aaKnown RBP13.44□□□□□ -0.26
NPIPB4-221ENST00000545367 AMOTL2Q9Y2J4 779 aa13.44□□□□□ -0.26
NPIPB4-221ENST00000545367 ATRNO75882 1429 aa13.43□□□□□ -0.26
NPIPB4-221ENST00000545367 ZRANB1Q9UGI0 708 aa13.43□□□□□ -0.26
NPIPB4-221ENST00000545367 PTCH1Q13635 1447 aa13.41□□□□□ -0.26
NPIPB4-221ENST00000545367 LRRC59Q96AG4 307 aaKnown RBP13.41□□□□□ -0.26
NPIPB4-221ENST00000545367 NGLY1Q96IV0 654 aa13.41□□□□□ -0.26
NPIPB4-221ENST00000545367 NEXMIFQ5QGS0 1516 aa13.4□□□□□ -0.26
NPIPB4-221ENST00000545367 CLTCL1P53675 1640 aa13.4□□□□□ -0.26
NPIPB4-221ENST00000545367 MKRN4PQ13434 485 aaPredicted RBP13.4□□□□□ -0.26
NPIPB4-221ENST00000545367 C1orf167Q5SNV9 1468 aa13.4□□□□□ -0.26
NPIPB4-221ENST00000545367 KIF1BO60333 1816 aa13.39□□□□□ -0.27
NPIPB4-221ENST00000545367 USP21Q9UK80 565 aa13.39□□□□□ -0.27
NPIPB4-221ENST00000545367 GLI3P10071 1580 aa13.38□□□□□ -0.27
NPIPB4-221ENST00000545367 MYOM2P54296 1465 aa13.38□□□□□ -0.27
NPIPB4-221ENST00000545367 METP08581 1390 aa13.38□□□□□ -0.27
NPIPB4-221ENST00000545367 RBM42Q9BTD8 480 aaKnown RBP13.37□□□□□ -0.27
NPIPB4-221ENST00000545367 TRPC5Q9UL62 973 aaPredicted RBP13.37□□□□□ -0.27
NPIPB4-221ENST00000545367 PLCH1Q4KWH8 1693 aa13.37□□□□□ -0.27
NPIPB4-221ENST00000545367 CDC42BPGQ6DT37 1551 aa13.36□□□□□ -0.27
NPIPB4-221ENST00000545367 ABCA3Q99758 1704 aa13.36□□□□□ -0.27
NPIPB4-221ENST00000545367 USP32Q8NFA0 1604 aa13.35□□□□□ -0.27
NPIPB4-221ENST00000545367 FAM50AQ14320 339 aaKnown RBP13.34□□□□□ -0.27
NPIPB4-221ENST00000545367 BLMP54132 1417 aaPredicted RBP13.33□□□□□ -0.28
NPIPB4-221ENST00000545367 BCL9LQ86UU0 1499 aa13.33□□□□□ -0.28
NPIPB4-221ENST00000545367 PXDNQ92626 1479 aa13.33□□□□□ -0.28
NPIPB4-221ENST00000545367 SOS2Q07890 1332 aaPredicted RBP13.32□□□□□ -0.28
NPIPB4-221ENST00000545367 RALGAPBQ86X10 1494 aa13.31□□□□□ -0.28
NPIPB4-221ENST00000545367 PPLO60437 1756 aa13.31□□□□□ -0.28
NPIPB4-221ENST00000545367 FNBP4Q8N3X1 1017 aaPredicted RBP13.3□□□□□ -0.28
NPIPB4-221ENST00000545367 ROBO2Q9HCK4 1378 aa13.3□□□□□ -0.28
NPIPB4-221ENST00000545367 NWD2Q9ULI1 1742 aa13.3□□□□□ -0.28
NPIPB4-221ENST00000545367 KIF1AQ12756 1690 aa13.29□□□□□ -0.28
NPIPB4-221ENST00000545367 ZNF326Q5BKZ1 582 aaKnown RBP13.29□□□□□ -0.28
NPIPB4-221ENST00000545367 ORAI2Q96SN7 254 aa13.29□□□□□ -0.28
NPIPB4-221ENST00000545367 RGPD1P0DJD0 1748 aa13.29□□□□□ -0.28
NPIPB4-221ENST00000545367 IFT172Q9UG01 1749 aa13.29□□□□□ -0.28
NPIPB4-221ENST00000545367 FMN2Q9NZ56 1722 aa13.28□□□□□ -0.28
NPIPB4-221ENST00000545367 CCDC125Q86Z20 511 aa13.28□□□□□ -0.28
NPIPB4-221ENST00000545367 NUP155O75694 1391 aa13.28□□□□□ -0.28
NPIPB4-221ENST00000545367 PRAG1Q86YV5 1406 aa13.28□□□□□ -0.28
NPIPB4-221ENST00000545367 LOC105371045A0A1W2PR82 267 aa13.27□□□□□ -0.29
NPIPB4-221ENST00000545367 DEFB132Q7Z7B7 95 aa13.27□□□□□ -0.29
NPIPB4-221ENST00000545367 NRAPQ86VF7 1730 aa13.27□□□□□ -0.29
NPIPB4-221ENST00000545367 TNS1Q9HBL0 1735 aaKnown RBP13.27□□□□□ -0.29
NPIPB4-221ENST00000545367 ROCK1Q13464 1354 aa13.26□□□□□ -0.29
NPIPB4-221ENST00000545367 KNDC1Q76NI1 1749 aa13.26□□□□□ -0.29
NPIPB4-221ENST00000545367 RGPD8O14715 1765 aaPredicted RBP13.25□□□□□ -0.29
NPIPB4-221ENST00000545367 SLIT2O94813 1529 aa13.25□□□□□ -0.29
NPIPB4-221ENST00000545367 SPDYE2BA6NHP3 402 aa13.25□□□□□ -0.29
NPIPB4-221ENST00000545367 SPDYE6P0CI01 402 aa13.25□□□□□ -0.29
NPIPB4-221ENST00000545367 SPDYE2Q495Y8 402 aa13.25□□□□□ -0.29
NPIPB4-221ENST00000545367 XPCQ01831 940 aaPredicted RBP13.24□□□□□ -0.29
NPIPB4-221ENST00000545367 GJD4Q96KN9 370 aaPredicted RBP13.24□□□□□ -0.29
NPIPB4-221ENST00000545367 HFM1A2PYH4 1435 aa13.23□□□□□ -0.29
NPIPB4-221ENST00000545367 NPHP3Q7Z494 1330 aa13.23□□□□□ -0.29
NPIPB4-221ENST00000545367 PSDA5PKW4 1024 aaPredicted RBP13.22□□□□□ -0.29
NPIPB4-221ENST00000545367 SF3B2Q13435 895 aaKnown RBP13.21□□□□□ -0.29
NPIPB4-221ENST00000545367 NAIPQ13075 1403 aa13.21□□□□□ -0.3
NPIPB4-221ENST00000545367 ADGRB2O60241 1585 aa13.19□□□□□ -0.3
NPIPB4-221ENST00000545367 ESCO1Q5FWF5 840 aa13.18□□□□□ -0.3
NPIPB4-221ENST00000545367 UNC5CLQ8IV45 518 aa13.18□□□□□ -0.3
NPIPB4-221ENST00000545367 CCDC144AA2RUR9 1427 aa13.18□□□□□ -0.3
NPIPB4-221ENST00000545367 TNS3Q68CZ2 1445 aa13.16□□□□□ -0.3
NPIPB4-221ENST00000545367 RREB1Q92766 1687 aa13.16□□□□□ -0.3
NPIPB4-221ENST00000545367 NUP188Q5SRE5 1749 aa13.16□□□□□ -0.3
NPIPB4-221ENST00000545367 THSD7AQ9UPZ6 1657 aa13.15□□□□□ -0.3
NPIPB4-221ENST00000545367 NUTM2FA1L443 756 aa13.15□□□□□ -0.3
NPIPB4-221ENST00000545367 FOXO3O43524 673 aa13.15□□□□□ -0.3
NPIPB4-221ENST00000545367 HRCP23327 699 aa13.15□□□□□ -0.3
NPIPB4-221ENST00000545367 SEPT12Q8IYM1 358 aa13.15□□□□□ -0.3
NPIPB4-221ENST00000545367 AKT1S1Q96B36 256 aa13.15□□□□□ -0.3
NPIPB4-221ENST00000545367 LRPPRCP42704 1394 aaKnown RBP13.15□□□□□ -0.3
NPIPB4-221ENST00000545367 CRYBG1Q9Y4K1 1723 aa13.14□□□□□ -0.31
NPIPB4-221ENST00000545367 A0A0G2JS52 829 aa13.14□□□□□ -0.31
NPIPB4-221ENST00000545367 ITGAEP38570 1179 aa13.14□□□□□ -0.31
NPIPB4-221ENST00000545367 MYT1Q01538 1121 aa13.14□□□□□ -0.31
NPIPB4-221ENST00000545367 CCDC9Q9Y3X0 531 aaKnown RBP13.14□□□□□ -0.31
NPIPB4-221ENST00000545367 TRPM3Q9HCF6 1732 aaPredicted RBP13.13□□□□□ -0.31
NPIPB4-221ENST00000545367 COL14A1Q05707 1796 aaKnown RBP13.13□□□□□ -0.31
NPIPB4-221ENST00000545367 PLEKHG5O94827 1062 aa13.13□□□□□ -0.31
NPIPB4-221ENST00000545367 SSUH2Q9Y2M2 353 aa13.13□□□□□ -0.31
NPIPB4-221ENST00000545367 TECPR2O15040 1411 aa13.13□□□□□ -0.31
NPIPB4-221ENST00000545367 BAG6P46379 1132 aa13.12□□□□□ -0.31
NPIPB4-221ENST00000545367 HAP1P54257 671 aaPredicted RBP13.12□□□□□ -0.31
NPIPB4-221ENST00000545367 KRT27Q7Z3Y8 459 aa13.12□□□□□ -0.31
NPIPB4-221ENST00000545367 SPATA31A3Q5VYP0 1347 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms