RNA–Protein interactions for RNA: ENST00000545305.1

SCARB1-209, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 851 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-209ENST00000545305 AMOTL2Q9Y2J4 779 aa19.02■□□□□ 0.64
SCARB1-209ENST00000545305 ROBO2Q9HCK4 1378 aa19.01■□□□□ 0.63
SCARB1-209ENST00000545305 PLEKHH1Q9ULM0 1364 aa19.01■□□□□ 0.63
SCARB1-209ENST00000545305 WAPLQ7Z5K2 1190 aa19■□□□□ 0.63
SCARB1-209ENST00000545305 PUS7Q96PZ0 661 aaKnown RBP18.99■□□□□ 0.63
SCARB1-209ENST00000545305 CHD2O14647 1828 aaKnown RBP18.99■□□□□ 0.63
SCARB1-209ENST00000545305 MYOM1P52179 1685 aa18.98■□□□□ 0.63
SCARB1-209ENST00000545305 ANP32CO43423 234 aa18.96■□□□□ 0.63
SCARB1-209ENST00000545305 SRPK2P78362 688 aaKnown RBP18.96■□□□□ 0.63
SCARB1-209ENST00000545305 ADGRB2O60241 1585 aa18.96■□□□□ 0.63
SCARB1-209ENST00000545305 NWD1Q149M9 1564 aa18.96■□□□□ 0.63
SCARB1-209ENST00000545305 ATAD2Q6PL18 1390 aa18.95■□□□□ 0.62
SCARB1-209ENST00000545305 KCNA6P17658 529 aa18.95■□□□□ 0.62
SCARB1-209ENST00000545305 MIER1Q8N108 512 aa18.94■□□□□ 0.62
SCARB1-209ENST00000545305 STRCQ7RTU9 1775 aa18.93■□□□□ 0.62
SCARB1-209ENST00000545305 NINLQ9Y2I6 1382 aa18.93■□□□□ 0.62
SCARB1-209ENST00000545305 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.92■□□□□ 0.62
SCARB1-209ENST00000545305 CDK19Q9BWU1 502 aa18.92■□□□□ 0.62
SCARB1-209ENST00000545305 CABP2Q9NPB3 220 aa18.92■□□□□ 0.62
SCARB1-209ENST00000545305 PANK3Q9H999 370 aa18.91■□□□□ 0.62
SCARB1-209ENST00000545305 NKTRP30414 1462 aaKnown RBP18.9■□□□□ 0.62
SCARB1-209ENST00000545305 WASLO00401 505 aaPredicted RBP18.9■□□□□ 0.62
SCARB1-209ENST00000545305 TMC1Q8TDI8 760 aa18.9■□□□□ 0.62
SCARB1-209ENST00000545305 KNSTRNQ9Y448 316 aa18.85■□□□□ 0.61
SCARB1-209ENST00000545305 NALCNQ8IZF0 1738 aa18.85■□□□□ 0.61
SCARB1-209ENST00000545305 ADGRL3Q9HAR2 1447 aa18.84■□□□□ 0.61
SCARB1-209ENST00000545305 ANKRD36BQ8N2N9 1353 aa18.84■□□□□ 0.61
SCARB1-209ENST00000545305 SLC12A5Q9H2X9 1139 aa18.84■□□□□ 0.61
SCARB1-209ENST00000545305 DMRT2Q9Y5R5 561 aa18.84■□□□□ 0.61
SCARB1-209ENST00000545305 CDC42BPGQ6DT37 1551 aa18.84■□□□□ 0.61
SCARB1-209ENST00000545305 KTN1Q86UP2 1357 aaKnown RBP18.83■□□□□ 0.61
SCARB1-209ENST00000545305 ATP7BP35670 1465 aa18.83■□□□□ 0.6
SCARB1-209ENST00000545305 PER1O15534 1290 aaPredicted RBP18.82■□□□□ 0.6
SCARB1-209ENST00000545305 C14orf37Q86TY3 774 aa18.82■□□□□ 0.6
SCARB1-209ENST00000545305 PROSER2Q86WR7 435 aaPredicted RBP18.82■□□□□ 0.6
SCARB1-209ENST00000545305 NUDT16Q96DE0 195 aaKnown RBP18.82■□□□□ 0.6
SCARB1-209ENST00000545305 TERF2IPQ9NYB0 399 aa18.82■□□□□ 0.6
SCARB1-209ENST00000545305 PPIP5K1Q6PFW1 1433 aa18.82■□□□□ 0.6
SCARB1-209ENST00000545305 ITSN1Q15811 1721 aa18.81■□□□□ 0.6
SCARB1-209ENST00000545305 FMN2Q9NZ56 1722 aa18.81■□□□□ 0.6
SCARB1-209ENST00000545305 HDGFL2Q7Z4V5 671 aaPredicted RBP18.81■□□□□ 0.6
SCARB1-209ENST00000545305 PRKRIP1Q9H875 184 aaPredicted RBP18.81■□□□□ 0.6
SCARB1-209ENST00000545305 TOPAZ1Q8N9V7 1692 aa18.8■□□□□ 0.6
SCARB1-209ENST00000545305 ANKARQ7Z5J8 1434 aa18.8■□□□□ 0.6
SCARB1-209ENST00000545305 NSD3Q9BZ95 1437 aa18.8■□□□□ 0.6
SCARB1-209ENST00000545305 STRCP1A6NGW2 1772 aa18.8■□□□□ 0.6
SCARB1-209ENST00000545305 USP32Q8NFA0 1604 aa18.79■□□□□ 0.6
SCARB1-209ENST00000545305 CCER2I3L3R5 266 aa18.79■□□□□ 0.6
SCARB1-209ENST00000545305 CNGB1Q14028 1251 aaPredicted RBP18.79■□□□□ 0.6
SCARB1-209ENST00000545305 CCDC61Q9Y6R9 512 aa18.79■□□□□ 0.6
SCARB1-209ENST00000545305 CABP1Q9NZU7 370 aa18.78■□□□□ 0.6
SCARB1-209ENST00000545305 A0A1W2PP64 1363 aa18.78■□□□□ 0.6
SCARB1-209ENST00000545305 NPC1L1Q9UHC9 1359 aa18.78■□□□□ 0.6
SCARB1-209ENST00000545305 PRR36Q9H6K5 1346 aa18.77■□□□□ 0.6
SCARB1-209ENST00000545305 NCOA3Q9Y6Q9 1424 aa18.77■□□□□ 0.6
SCARB1-209ENST00000545305 RALBP1Q15311 655 aa18.77■□□□□ 0.6
SCARB1-209ENST00000545305 CARD14Q9BXL6 1004 aa18.76■□□□□ 0.59
SCARB1-209ENST00000545305 CD163L1Q9NR16 1453 aa18.76■□□□□ 0.59
SCARB1-209ENST00000545305 CC2D1BQ5T0F9 858 aaKnown RBP18.75■□□□□ 0.59
SCARB1-209ENST00000545305 RBM33Q96EV2 1170 aaKnown RBP18.75■□□□□ 0.59
SCARB1-209ENST00000545305 TMEM94Q12767 1356 aa18.75■□□□□ 0.59
SCARB1-209ENST00000545305 CGNL1Q0VF96 1302 aa18.74■□□□□ 0.59
SCARB1-209ENST00000545305 PARD3Q8TEW0 1356 aa18.74■□□□□ 0.59
SCARB1-209ENST00000545305 NUTM2FA1L443 756 aa18.74■□□□□ 0.59
SCARB1-209ENST00000545305 AMER1Q5JTC6 1135 aaPredicted RBP18.74■□□□□ 0.59
SCARB1-209ENST00000545305 AKAP12Q02952 1782 aa18.73■□□□□ 0.59
SCARB1-209ENST00000545305 ZNF335Q9H4Z2 1342 aaPredicted RBP18.73■□□□□ 0.59
SCARB1-209ENST00000545305 NSD2O96028 1365 aa18.72■□□□□ 0.59
SCARB1-209ENST00000545305 DCCP43146 1447 aa18.72■□□□□ 0.59
SCARB1-209ENST00000545305 CPSF1Q10570 1443 aaKnown RBP18.72■□□□□ 0.59
SCARB1-209ENST00000545305 MYBBP1AQ9BQG0 1328 aaKnown RBP18.72■□□□□ 0.59
SCARB1-209ENST00000545305 MON2Q7Z3U7 1717 aa18.71■□□□□ 0.59
SCARB1-209ENST00000545305 PLEKHG3A1L390 1219 aa18.71■□□□□ 0.59
SCARB1-209ENST00000545305 C19orf44Q9H6X5 657 aa18.71■□□□□ 0.59
SCARB1-209ENST00000545305 EDC4Q6P2E9 1401 aaKnown RBP18.71■□□□□ 0.59
SCARB1-209ENST00000545305 ZNF692Q9BU19 519 aaPredicted RBP18.7■□□□□ 0.58
SCARB1-209ENST00000545305 RGPD8O14715 1765 aaPredicted RBP18.7■□□□□ 0.58
SCARB1-209ENST00000545305 MSH6P52701 1360 aa18.69■□□□□ 0.58
SCARB1-209ENST00000545305 KIF20BQ96Q89 1820 aa18.69■□□□□ 0.58
SCARB1-209ENST00000545305 LRRC7Q96NW7 1537 aa18.69■□□□□ 0.58
SCARB1-209ENST00000545305 ATF3P18847 181 aa18.68■□□□□ 0.58
SCARB1-209ENST00000545305 ACEP12821 1306 aa18.67■□□□□ 0.58
SCARB1-209ENST00000545305 ANKRD26Q9UPS8 1709 aa18.66■□□□□ 0.58
SCARB1-209ENST00000545305 XIRP1Q702N8 1843 aaKnown RBP18.66■□□□□ 0.58
SCARB1-209ENST00000545305 NGDNQ8NEJ9 315 aaKnown RBP18.66■□□□□ 0.58
SCARB1-209ENST00000545305 POLR3AO14802 1390 aaPredicted RBP18.66■□□□□ 0.58
SCARB1-209ENST00000545305 NRKQ7Z2Y5 1582 aa18.65■□□□□ 0.58
SCARB1-209ENST00000545305 MORC1Q86VD1 984 aa18.65■□□□□ 0.58
SCARB1-209ENST00000545305 NLRP13Q86W25 1043 aa18.65■□□□□ 0.58
SCARB1-209ENST00000545305 PMFBP1Q8TBY8 1022 aa18.65■□□□□ 0.58
SCARB1-209ENST00000545305 MRS2Q9HD23 443 aa18.65■□□□□ 0.58
SCARB1-209ENST00000545305 BRD4O60885 1362 aaPredicted RBP18.65■□□□□ 0.58
SCARB1-209ENST00000545305 USP6P35125 1406 aa18.65■□□□□ 0.58
SCARB1-209ENST00000545305 CADPS2Q86UW7 1296 aa18.64■□□□□ 0.57
SCARB1-209ENST00000545305 PHF8Q9UPP1 1060 aa18.64■□□□□ 0.57
SCARB1-209ENST00000545305 KIF1AQ12756 1690 aa18.63■□□□□ 0.57
SCARB1-209ENST00000545305 C1orf167Q5SNV9 1468 aa18.63■□□□□ 0.57
SCARB1-209ENST00000545305 ESCO1Q5FWF5 840 aa18.62■□□□□ 0.57
SCARB1-209ENST00000545305 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.62■□□□□ 0.57
SCARB1-209ENST00000545305 MST1RQ04912 1400 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms