RNA–Protein interactions for RNA: ENST00000545284.1

COPA-207, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 2

Gene COPA, Length 879 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-207ENST00000545284 HFM1A2PYH4 1435 aa11.29□□□□□ -0.6
COPA-207ENST00000545284 SEPT12Q8IYM1 358 aa11.29□□□□□ -0.6
COPA-207ENST00000545284 SLIT2O94813 1529 aa11.29□□□□□ -0.6
COPA-207ENST00000545284 NRXN3Q9Y4C0 1643 aa11.28□□□□□ -0.6
COPA-207ENST00000545284 VGFO15240 615 aaPredicted RBP11.28□□□□□ -0.6
COPA-207ENST00000545284 VPS72Q15906 364 aa11.28□□□□□ -0.6
COPA-207ENST00000545284 KRT27Q7Z3Y8 459 aa11.28□□□□□ -0.6
COPA-207ENST00000545284 NUP155O75694 1391 aa11.28□□□□□ -0.6
COPA-207ENST00000545284 IQGAP3Q86VI3 1631 aa11.27□□□□□ -0.6
COPA-207ENST00000545284 SPHKAPQ2M3C7 1700 aa11.27□□□□□ -0.61
COPA-207ENST00000545284 ESCO1Q5FWF5 840 aa11.27□□□□□ -0.61
COPA-207ENST00000545284 ROCK1Q13464 1354 aa11.27□□□□□ -0.61
COPA-207ENST00000545284 ROBO2Q9HCK4 1378 aa11.26□□□□□ -0.61
COPA-207ENST00000545284 PXDNQ92626 1479 aa11.25□□□□□ -0.61
COPA-207ENST00000545284 E9PCH4 1651 aa11.25□□□□□ -0.61
COPA-207ENST00000545284 FOXO3O43524 673 aa11.25□□□□□ -0.61
COPA-207ENST00000545284 FAM50AQ14320 339 aaKnown RBP11.25□□□□□ -0.61
COPA-207ENST00000545284 NALCNQ8IZF0 1738 aa11.24□□□□□ -0.61
COPA-207ENST00000545284 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.24□□□□□ -0.61
COPA-207ENST00000545284 PSDA5PKW4 1024 aaPredicted RBP11.24□□□□□ -0.61
COPA-207ENST00000545284 YY1P25490 414 aa11.24□□□□□ -0.61
COPA-207ENST00000545284 SPATA31A3Q5VYP0 1347 aa11.24□□□□□ -0.61
COPA-207ENST00000545284 RPGRIP1LQ68CZ1 1315 aa11.24□□□□□ -0.61
COPA-207ENST00000545284 GLI3P10071 1580 aa11.23□□□□□ -0.61
COPA-207ENST00000545284 DISP2A7MBM2 1401 aa11.21□□□□□ -0.61
COPA-207ENST00000545284 CCDC144AA2RUR9 1427 aa11.2□□□□□ -0.62
COPA-207ENST00000545284 DCAF8L1A6NGE4 600 aa11.2□□□□□ -0.62
COPA-207ENST00000545284 PSME1Q06323 249 aa11.2□□□□□ -0.62
COPA-207ENST00000545284 NEXMIFQ5QGS0 1516 aa11.19□□□□□ -0.62
COPA-207ENST00000545284 HAP1P54257 671 aaPredicted RBP11.19□□□□□ -0.62
COPA-207ENST00000545284 R3HDM1Q15032 1099 aaKnown RBP11.19□□□□□ -0.62
COPA-207ENST00000545284 CDC42BPGQ6DT37 1551 aa11.19□□□□□ -0.62
COPA-207ENST00000545284 PARD3Q8TEW0 1356 aa11.18□□□□□ -0.62
COPA-207ENST00000545284 XPCQ01831 940 aaPredicted RBP11.18□□□□□ -0.62
COPA-207ENST00000545284 EN1Q05925 392 aaPredicted RBP11.18□□□□□ -0.62
COPA-207ENST00000545284 CCDC9Q9Y3X0 531 aaKnown RBP11.18□□□□□ -0.62
COPA-207ENST00000545284 MARF1Q9Y4F3 1742 aaKnown RBP11.18□□□□□ -0.62
COPA-207ENST00000545284 KRT28Q7Z3Y7 464 aa11.17□□□□□ -0.62
COPA-207ENST00000545284 SBNO1A3KN83 1393 aa11.16□□□□□ -0.62
COPA-207ENST00000545284 ARHGEF10O15013 1369 aa11.16□□□□□ -0.62
COPA-207ENST00000545284 LOC105371045A0A1W2PR82 267 aa11.15□□□□□ -0.62
COPA-207ENST00000545284 SIRT1Q96EB6 747 aa11.15□□□□□ -0.62
COPA-207ENST00000545284 CAMKK2Q96RR4 588 aa11.15□□□□□ -0.62
COPA-207ENST00000545284 TECPR2O15040 1411 aa11.15□□□□□ -0.62
COPA-207ENST00000545284 NAIPQ13075 1403 aa11.15□□□□□ -0.62
COPA-207ENST00000545284 USP32Q8NFA0 1604 aa11.14□□□□□ -0.63
COPA-207ENST00000545284 A0A0G2JS52 829 aa11.14□□□□□ -0.63
COPA-207ENST00000545284 FAM83GA6ND36 823 aa11.14□□□□□ -0.63
COPA-207ENST00000545284 MYT1Q01538 1121 aa11.14□□□□□ -0.63
COPA-207ENST00000545284 FAM98CQ17RN3 349 aaKnown RBP11.14□□□□□ -0.63
COPA-207ENST00000545284 FAM196AQ6ZSG2 479 aa11.14□□□□□ -0.63
COPA-207ENST00000545284 TNS3Q68CZ2 1445 aa11.14□□□□□ -0.63
COPA-207ENST00000545284 ABCC11Q96J66 1382 aa11.14□□□□□ -0.63
COPA-207ENST00000545284 EZH2Q15910 746 aaKnown RBP11.12□□□□□ -0.63
COPA-207ENST00000545284 NBPF8Q3BBV2 869 aa11.12□□□□□ -0.63
COPA-207ENST00000545284 NBPF14Q5TI25 921 aa11.12□□□□□ -0.63
COPA-207ENST00000545284 NINLQ9Y2I6 1382 aa11.12□□□□□ -0.63
COPA-207ENST00000545284 NWD2Q9ULI1 1742 aa11.12□□□□□ -0.63
COPA-207ENST00000545284 BRWD3Q6RI45 1802 aa11.12□□□□□ -0.63
COPA-207ENST00000545284 SPON1Q9HCB6 807 aa11.11□□□□□ -0.63
COPA-207ENST00000545284 BTG4Q9NY30 223 aa11.11□□□□□ -0.63
COPA-207ENST00000545284 PHF8Q9UPP1 1060 aa11.11□□□□□ -0.63
COPA-207ENST00000545284 SPATA31A5Q5VU36 1347 aa11.1□□□□□ -0.63
COPA-207ENST00000545284 SPATA31A7Q8IWB4 1347 aa11.1□□□□□ -0.63
COPA-207ENST00000545284 NUTM2FA1L443 756 aa11.1□□□□□ -0.63
COPA-207ENST00000545284 IFFO2Q5TF58 517 aa11.1□□□□□ -0.63
COPA-207ENST00000545284 WAPLQ7Z5K2 1190 aa11.1□□□□□ -0.63
COPA-207ENST00000545284 CABLES1Q8TDN4 633 aa11.1□□□□□ -0.63
COPA-207ENST00000545284 KIF1AQ12756 1690 aa11.09□□□□□ -0.63
COPA-207ENST00000545284 C11orf95C9JLR9 678 aaPredicted RBP11.09□□□□□ -0.63
COPA-207ENST00000545284 KCNQ2O43526 872 aa11.09□□□□□ -0.63
COPA-207ENST00000545284 PPP1R1BQ9UD71 204 aaPredicted RBP11.09□□□□□ -0.63
COPA-207ENST00000545284 CLTCL1P53675 1640 aa11.09□□□□□ -0.63
COPA-207ENST00000545284 APBA3O96018 575 aa11.08□□□□□ -0.64
COPA-207ENST00000545284 RGPD1P0DJD0 1748 aa11.08□□□□□ -0.64
COPA-207ENST00000545284 LMOD2Q6P5Q4 547 aa11.07□□□□□ -0.64
COPA-207ENST00000545284 RRBP1Q9P2E9 1410 aaKnown RBP11.07□□□□□ -0.64
COPA-207ENST00000545284 ADGRB2O60241 1585 aa11.07□□□□□ -0.64
COPA-207ENST00000545284 NRXN1Q9ULB1 1477 aa11.06□□□□□ -0.64
COPA-207ENST00000545284 ANKRD30BQ9BXX2 1392 aa11.06□□□□□ -0.64
COPA-207ENST00000545284 TRIM37O94972 964 aa11.06□□□□□ -0.64
COPA-207ENST00000545284 STK26Q9P289 416 aa11.06□□□□□ -0.64
COPA-207ENST00000545284 FAM182BQ5T319 152 aa11.05□□□□□ -0.64
COPA-207ENST00000545284 ZNF784Q8NCA9 323 aaPredicted RBP11.05□□□□□ -0.64
COPA-207ENST00000545284 KIF1BO60333 1816 aa11.04□□□□□ -0.64
COPA-207ENST00000545284 PLCH1Q4KWH8 1693 aa11.04□□□□□ -0.64
COPA-207ENST00000545284 SPATA31A1Q5TZJ5 1347 aa11.04□□□□□ -0.64
COPA-207ENST00000545284 PLEKHH1Q9ULM0 1364 aa11.03□□□□□ -0.64
COPA-207ENST00000545284 BARGINQ6ZT62 677 aa11.03□□□□□ -0.64
COPA-207ENST00000545284 ADGRF5Q8IZF2 1346 aa11.03□□□□□ -0.64
COPA-207ENST00000545284 ANKARQ7Z5J8 1434 aa11.02□□□□□ -0.64
COPA-207ENST00000545284 ITGAEP38570 1179 aa11.02□□□□□ -0.65
COPA-207ENST00000545284 C1QTNF8P60827 252 aa11.02□□□□□ -0.65
COPA-207ENST00000545284 PDE3BQ13370 1112 aa11.02□□□□□ -0.65
COPA-207ENST00000545284 PRDM11Q9NQV5 511 aa11.02□□□□□ -0.65
COPA-207ENST00000545284 GPRASP1Q5JY77 1395 aa11.02□□□□□ -0.65
COPA-207ENST00000545284 YTHDC2Q9H6S0 1430 aaKnown RBP11.01□□□□□ -0.65
COPA-207ENST00000545284 FMN2Q9NZ56 1722 aa11.01□□□□□ -0.65
COPA-207ENST00000545284 SENP3-EIF4A1A0A087X0R7 540 aa11.01□□□□□ -0.65
COPA-207ENST00000545284 PLSCR1O15162 318 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms