RNA–Protein interactions for RNA: ENST00000545202.1

AP000439.3-201, humanhuman

TSL 2 BASIC

Gene AP000439.3, Length 2,376 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000439.3-201ENST00000545202 LAS1LQ9Y4W2 734 aaKnown RBP20.28■□□□□ 0.84
AP000439.3-201ENST00000545202 RPGRIP1LQ68CZ1 1315 aa20.27■□□□□ 0.83
AP000439.3-201ENST00000545202 ABCC3O15438 1527 aa20.26■□□□□ 0.83
AP000439.3-201ENST00000545202 DDRGK1Q96HY6 314 aa20.26■□□□□ 0.83
AP000439.3-201ENST00000545202 SIGLEC1Q9BZZ2 1709 aa20.24■□□□□ 0.83
AP000439.3-201ENST00000545202 NEUROD2Q15784 382 aa20.24■□□□□ 0.83
AP000439.3-201ENST00000545202 FAM161AQ3B820 660 aa20.24■□□□□ 0.83
AP000439.3-201ENST00000545202 CAMSAP1Q5T5Y3 1602 aa20.24■□□□□ 0.83
AP000439.3-201ENST00000545202 RGS3P49796 1198 aa20.24■□□□□ 0.83
AP000439.3-201ENST00000545202 C8orf34Q49A92 452 aa20.23■□□□□ 0.83
AP000439.3-201ENST00000545202 NUTM2DQ5VT03 806 aaPredicted RBP20.23■□□□□ 0.83
AP000439.3-201ENST00000545202 RUNDC1Q96C34 613 aa20.23■□□□□ 0.83
AP000439.3-201ENST00000545202 RRP7AQ9Y3A4 280 aaKnown RBP20.23■□□□□ 0.83
AP000439.3-201ENST00000545202 GLI2P10070 1586 aa20.23■□□□□ 0.83
AP000439.3-201ENST00000545202 USP32Q8NFA0 1604 aa20.22■□□□□ 0.83
AP000439.3-201ENST00000545202 MTHFSP49914 203 aa20.21■□□□□ 0.83
AP000439.3-201ENST00000545202 PDE3AQ14432 1141 aa20.21■□□□□ 0.83
AP000439.3-201ENST00000545202 CGNL1Q0VF96 1302 aa20.21■□□□□ 0.83
AP000439.3-201ENST00000545202 TCP11L2Q8N4U5 519 aa20.21■□□□□ 0.83
AP000439.3-201ENST00000545202 ARHGEF28Q8N1W1 1705 aaKnown RBP20.2■□□□□ 0.82
AP000439.3-201ENST00000545202 RAPGEF3O95398 923 aa20.2■□□□□ 0.82
AP000439.3-201ENST00000545202 NEFMP07197 916 aa20.2■□□□□ 0.82
AP000439.3-201ENST00000545202 IGHDP01880 384 aa20.19■□□□□ 0.82
AP000439.3-201ENST00000545202 CANXP27824 592 aaKnown RBP20.19■□□□□ 0.82
AP000439.3-201ENST00000545202 PIK3C2BO00750 1634 aa20.19■□□□□ 0.82
AP000439.3-201ENST00000545202 IQSEC2Q5JU85 1478 aa20.19■□□□□ 0.82
AP000439.3-201ENST00000545202 EVC2Q86UK5 1308 aa20.18■□□□□ 0.82
AP000439.3-201ENST00000545202 VGFO15240 615 aaPredicted RBP20.18■□□□□ 0.82
AP000439.3-201ENST00000545202 PPM1GO15355 546 aaPredicted RBP20.18■□□□□ 0.82
AP000439.3-201ENST00000545202 PANK1Q8TE04 598 aa20.18■□□□□ 0.82
AP000439.3-201ENST00000545202 NEXMIFQ5QGS0 1516 aa20.18■□□□□ 0.82
AP000439.3-201ENST00000545202 TULP4Q9NRJ4 1543 aa20.18■□□□□ 0.82
AP000439.3-201ENST00000545202 OSCARQ8IYS5 282 aa20.17■□□□□ 0.82
AP000439.3-201ENST00000545202 COG6Q9Y2V7 657 aa20.17■□□□□ 0.82
AP000439.3-201ENST00000545202 NINLQ9Y2I6 1382 aa20.17■□□□□ 0.82
AP000439.3-201ENST00000545202 PHF23Q9BUL5 403 aaPredicted RBP20.17■□□□□ 0.82
AP000439.3-201ENST00000545202 CFAP53Q96M91 514 aa20.16■□□□□ 0.82
AP000439.3-201ENST00000545202 FRAT1Q92837 279 aaPredicted RBP20.16■□□□□ 0.82
AP000439.3-201ENST00000545202 CLUAP1Q96AJ1 413 aa20.16■□□□□ 0.82
AP000439.3-201ENST00000545202 PUS7Q96PZ0 661 aaKnown RBP20.16■□□□□ 0.82
AP000439.3-201ENST00000545202 USP35Q9P2H5 1018 aa20.16■□□□□ 0.82
AP000439.3-201ENST00000545202 ANKRD36BQ8N2N9 1353 aa20.16■□□□□ 0.82
AP000439.3-201ENST00000545202 SLC4A3P48751 1232 aa20.15■□□□□ 0.82
AP000439.3-201ENST00000545202 CABP2Q9NPB3 220 aa20.15■□□□□ 0.82
AP000439.3-201ENST00000545202 RARSP54136 660 aaKnown RBP20.14■□□□□ 0.82
AP000439.3-201ENST00000545202 WDR63Q8IWG1 891 aa20.14■□□□□ 0.82
AP000439.3-201ENST00000545202 SAFB2Q14151 953 aaKnown RBP eCLIP20.13■□□□□ 0.81
AP000439.3-201ENST00000545202 DIP2CQ9Y2E4 1556 aa20.13■□□□□ 0.81
AP000439.3-201ENST00000545202 NEO1Q92859 1461 aa20.13■□□□□ 0.81
AP000439.3-201ENST00000545202 IDI1Q13907 227 aa20.12■□□□□ 0.81
AP000439.3-201ENST00000545202 NSD2O96028 1365 aa20.12■□□□□ 0.81
AP000439.3-201ENST00000545202 CCDC27Q2M243 656 aa20.12■□□□□ 0.81
AP000439.3-201ENST00000545202 VIRMAQ69YN4 1812 aaKnown RBP20.11■□□□□ 0.81
AP000439.3-201ENST00000545202 SENP3Q9H4L4 574 aaPredicted RBP20.11■□□□□ 0.81
AP000439.3-201ENST00000545202 MYO5BQ9ULV0 1848 aa20.1■□□□□ 0.81
AP000439.3-201ENST00000545202 U2AF1L5P0DN76 240 aaPredicted RBP20.1■□□□□ 0.81
AP000439.3-201ENST00000545202 U2AF1Q01081 240 aaKnown RBP eCLIP20.1■□□□□ 0.81
AP000439.3-201ENST00000545202 STK26Q9P289 416 aa20.09■□□□□ 0.81
AP000439.3-201ENST00000545202 ARHGAP31Q2M1Z3 1444 aa20.09■□□□□ 0.81
AP000439.3-201ENST00000545202 BCL2L13Q9BXK5 485 aa20.08■□□□□ 0.81
AP000439.3-201ENST00000545202 TNNQ9UQP3 1299 aa20.08■□□□□ 0.81
AP000439.3-201ENST00000545202 RLBP1P12271 317 aa20.07■□□□□ 0.8
AP000439.3-201ENST00000545202 RICTORQ6R327 1708 aa20.07■□□□□ 0.8
AP000439.3-201ENST00000545202 A0A1W2PP64 1363 aa20.07■□□□□ 0.8
AP000439.3-201ENST00000545202 SRPK2P78362 688 aaKnown RBP20.06■□□□□ 0.8
AP000439.3-201ENST00000545202 MYH16Q9H6N6 1097 aa20.06■□□□□ 0.8
AP000439.3-201ENST00000545202 SLC52A1Q9NWF4 448 aa20.06■□□□□ 0.8
AP000439.3-201ENST00000545202 ZFYVE9O95405 1425 aa20.05■□□□□ 0.8
AP000439.3-201ENST00000545202 MAPK8IP3Q9UPT6 1336 aa20.05■□□□□ 0.8
AP000439.3-201ENST00000545202 ABCC11Q96J66 1382 aa20.05■□□□□ 0.8
AP000439.3-201ENST00000545202 NCBP3Q53F19 620 aaKnown RBP20.05■□□□□ 0.8
AP000439.3-201ENST00000545202 ADGRB2O60241 1585 aa20.04■□□□□ 0.8
AP000439.3-201ENST00000545202 PCDHB15Q9Y5E8 787 aa20.04■□□□□ 0.8
AP000439.3-201ENST00000545202 PMFBP1Q8TBY8 1022 aa20.03■□□□□ 0.8
AP000439.3-201ENST00000545202 GGNBP2Q9H3C7 697 aa20.03■□□□□ 0.8
AP000439.3-201ENST00000545202 YEATS2Q9ULM3 1422 aa20.03■□□□□ 0.8
AP000439.3-201ENST00000545202 AAMPQ13685 434 aa20.03■□□□□ 0.8
AP000439.3-201ENST00000545202 NFKBIBQ15653 356 aa20.02■□□□□ 0.8
AP000439.3-201ENST00000545202 PREX1Q8TCU6 1659 aa20.02■□□□□ 0.8
AP000439.3-201ENST00000545202 TMEM131LA2VDJ0 1609 aa20.02■□□□□ 0.79
AP000439.3-201ENST00000545202 U2SURPO15042 1029 aaKnown RBP20.01■□□□□ 0.79
AP000439.3-201ENST00000545202 USP19O94966 1318 aa20.01■□□□□ 0.79
AP000439.3-201ENST00000545202 MINK1Q8N4C8 1332 aaPredicted RBP20.01■□□□□ 0.79
AP000439.3-201ENST00000545202 PTPRMP28827 1452 aa20.01■□□□□ 0.79
AP000439.3-201ENST00000545202 SEC24BO95487 1268 aa20■□□□□ 0.79
AP000439.3-201ENST00000545202 PRAM1Q96QH2 718 aa19.99■□□□□ 0.79
AP000439.3-201ENST00000545202 PLEKHF1Q96S99 279 aa19.99■□□□□ 0.79
AP000439.3-201ENST00000545202 TSR2Q969E8 191 aaKnown RBP19.99■□□□□ 0.79
AP000439.3-201ENST00000545202 ANKRD26Q9UPS8 1709 aa19.98■□□□□ 0.79
AP000439.3-201ENST00000545202 FYB1O15117 783 aa19.98■□□□□ 0.79
AP000439.3-201ENST00000545202 ATAD2Q6PL18 1390 aa19.98■□□□□ 0.79
AP000439.3-201ENST00000545202 TERF2IPQ9NYB0 399 aa19.98■□□□□ 0.79
AP000439.3-201ENST00000545202 POGKQ9P215 609 aa19.98■□□□□ 0.79
AP000439.3-201ENST00000545202 COL3A1P02461 1466 aaPredicted RBP19.97■□□□□ 0.79
AP000439.3-201ENST00000545202 TMPOP42166 694 aaKnown RBP19.97■□□□□ 0.79
AP000439.3-201ENST00000545202 YTHDC2Q9H6S0 1430 aaKnown RBP19.97■□□□□ 0.79
AP000439.3-201ENST00000545202 CD163L1Q9NR16 1453 aa19.96■□□□□ 0.79
AP000439.3-201ENST00000545202 MVPQ14764 893 aaKnown RBP19.96■□□□□ 0.79
AP000439.3-201ENST00000545202 ZKSCAN2Q63HK3 967 aa19.96■□□□□ 0.79
AP000439.3-201ENST00000545202 PDZRN3Q9UPQ7 1066 aa19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms