RNA–Protein interactions for RNA: ENST00000544596.5

ABCA13-207, Transcript of ATP binding cassette subfamily A member 13, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene ABCA13, Length 7,870 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA13-207ENST00000544596 WASHC2AQ641Q2 1341 aa9.76□□□□□ -0.85
ABCA13-207ENST00000544596 ZKSCAN2Q63HK3 967 aa9.76□□□□□ -0.85
ABCA13-207ENST00000544596 NLRP2Q9NX02 1062 aa9.76□□□□□ -0.85
ABCA13-207ENST00000544596 MINK1Q8N4C8 1332 aaPredicted RBP9.76□□□□□ -0.85
ABCA13-207ENST00000544596 SEPT11Q9NVA2 429 aaKnown RBP9.75□□□□□ -0.85
ABCA13-207ENST00000544596 NUTM2GQ5VZR2 741 aa9.75□□□□□ -0.85
ABCA13-207ENST00000544596 TMEM87AQ8NBN3 555 aa9.75□□□□□ -0.85
ABCA13-207ENST00000544596 ATF3P18847 181 aa9.75□□□□□ -0.85
ABCA13-207ENST00000544596 COG6Q9Y2V7 657 aa9.75□□□□□ -0.85
ABCA13-207ENST00000544596 CCER2I3L3R5 266 aa9.75□□□□□ -0.85
ABCA13-207ENST00000544596 EZRP15311 586 aaKnown RBP9.75□□□□□ -0.85
ABCA13-207ENST00000544596 SART3Q15020 963 aaKnown RBP9.75□□□□□ -0.85
ABCA13-207ENST00000544596 RBM42Q9BTD8 480 aaKnown RBP9.75□□□□□ -0.85
ABCA13-207ENST00000544596 ERLIN2O94905 339 aa9.75□□□□□ -0.85
ABCA13-207ENST00000544596 SMC2O95347 1197 aa9.75□□□□□ -0.85
ABCA13-207ENST00000544596 TANGO6Q9C0B7 1094 aa9.75□□□□□ -0.85
ABCA13-207ENST00000544596 FAM161AQ3B820 660 aa9.74□□□□□ -0.85
ABCA13-207ENST00000544596 CENPHQ9H3R5 247 aa9.74□□□□□ -0.85
ABCA13-207ENST00000544596 ERCC4Q92889 916 aaPredicted RBP9.74□□□□□ -0.85
ABCA13-207ENST00000544596 NAT10Q9H0A0 1025 aaKnown RBP9.74□□□□□ -0.85
ABCA13-207ENST00000544596 CT47B1P0C2W7 299 aaPredicted RBP9.74□□□□□ -0.85
ABCA13-207ENST00000544596 HNRNPMP52272 730 aaKnown RBP eCLIP9.74□□□□□ -0.85
ABCA13-207ENST00000544596 TBC1D2BQ9UPU7 963 aa9.74□□□□□ -0.85
ABCA13-207ENST00000544596 ZNF428Q96B54 188 aa9.74□□□□□ -0.85
ABCA13-207ENST00000544596 DNAJC2Q99543 621 aaKnown RBP9.74□□□□□ -0.85
ABCA13-207ENST00000544596 TXLNAP40222 546 aa9.73□□□□□ -0.85
ABCA13-207ENST00000544596 KIF27Q86VH2 1401 aa9.73□□□□□ -0.85
ABCA13-207ENST00000544596 ERC2O15083 957 aa9.73□□□□□ -0.85
ABCA13-207ENST00000544596 SLC3A2P08195 630 aaKnown RBP9.73□□□□□ -0.85
ABCA13-207ENST00000544596 SSR1P43307 286 aaKnown RBP9.73□□□□□ -0.85
ABCA13-207ENST00000544596 CHMP5Q9NZZ3 219 aa9.73□□□□□ -0.85
ABCA13-207ENST00000544596 FILIP1LQ4L180 1135 aa9.73□□□□□ -0.85
ABCA13-207ENST00000544596 TSPYL4Q9UJ04 414 aa9.73□□□□□ -0.85
ABCA13-207ENST00000544596 SMARCE1Q969G3 411 aa9.73□□□□□ -0.85
ABCA13-207ENST00000544596 PSMD1Q99460 953 aa9.73□□□□□ -0.85
ABCA13-207ENST00000544596 ZSCAN29Q8IWY8 852 aaPredicted RBP9.72□□□□□ -0.85
ABCA13-207ENST00000544596 TIMELESSQ9UNS1 1208 aa9.72□□□□□ -0.85
ABCA13-207ENST00000544596 DEF6Q9H4E7 631 aa9.72□□□□□ -0.85
ABCA13-207ENST00000544596 NUTM2BA6NNL0 878 aaPredicted RBP9.72□□□□□ -0.85
ABCA13-207ENST00000544596 NUTM2EB1AL46 878 aaPredicted RBP9.72□□□□□ -0.85
ABCA13-207ENST00000544596 NUTM2AQ8IVF1 878 aaPredicted RBP9.72□□□□□ -0.85
ABCA13-207ENST00000544596 CEBPZQ03701 1054 aaKnown RBP9.72□□□□□ -0.85
ABCA13-207ENST00000544596 CCDC181Q5TID7 509 aa9.72□□□□□ -0.85
ABCA13-207ENST00000544596 RSPH6AQ9H0K4 717 aa9.72□□□□□ -0.85
ABCA13-207ENST00000544596 GOLGA6L10A6NI86 522 aa9.71□□□□□ -0.85
ABCA13-207ENST00000544596 PLCD3Q8N3E9 789 aa9.71□□□□□ -0.85
ABCA13-207ENST00000544596 FSD1Q9BTV5 496 aa9.71□□□□□ -0.85
ABCA13-207ENST00000544596 MPHOSPH9Q99550 1183 aa9.71□□□□□ -0.86
ABCA13-207ENST00000544596 STRN4Q9NRL3 753 aa9.71□□□□□ -0.86
ABCA13-207ENST00000544596 SSBP05455 408 aaKnown RBP eCLIP9.71□□□□□ -0.86
ABCA13-207ENST00000544596 CCDC112Q8NEF3 446 aa9.71□□□□□ -0.86
ABCA13-207ENST00000544596 DESP17661 470 aa9.7□□□□□ -0.86
ABCA13-207ENST00000544596 SCLT1Q96NL6 688 aa9.7□□□□□ -0.86
ABCA13-207ENST00000544596 KIF6Q6ZMV9 814 aa9.7□□□□□ -0.86
ABCA13-207ENST00000544596 GBP2P32456 591 aaPredicted RBP9.7□□□□□ -0.86
ABCA13-207ENST00000544596 RIPK4P57078 832 aa9.7□□□□□ -0.86
ABCA13-207ENST00000544596 NLRP13Q86W25 1043 aa9.7□□□□□ -0.86
ABCA13-207ENST00000544596 RNF214Q8ND24 703 aa9.7□□□□□ -0.86
ABCA13-207ENST00000544596 CWC15Q9P013 229 aaKnown RBP9.7□□□□□ -0.86
ABCA13-207ENST00000544596 CLASRPQ8N2M8 674 aaKnown RBP9.7□□□□□ -0.86
ABCA13-207ENST00000544596 CNNM1Q9NRU3 951 aa9.7□□□□□ -0.86
ABCA13-207ENST00000544596 ZNHIT6Q9NWK9 470 aaKnown RBP9.7□□□□□ -0.86
ABCA13-207ENST00000544596 TRIM5Q9C035 493 aa9.69□□□□□ -0.86
ABCA13-207ENST00000544596 PANK3Q9H999 370 aa9.69□□□□□ -0.86
ABCA13-207ENST00000544596 INTS3Q68E01 1043 aaKnown RBP9.69□□□□□ -0.86
ABCA13-207ENST00000544596 CENPQQ7L2Z9 268 aaPredicted RBP9.69□□□□□ -0.86
ABCA13-207ENST00000544596 EEA1Q15075 1411 aa9.69□□□□□ -0.86
ABCA13-207ENST00000544596 BAZ1BQ9UIG0 1483 aaKnown RBP9.69□□□□□ -0.86
ABCA13-207ENST00000544596 HMOX1P09601 288 aa9.69□□□□□ -0.86
ABCA13-207ENST00000544596 GSE1Q14687 1217 aa9.69□□□□□ -0.86
ABCA13-207ENST00000544596 DIAPH1O60610 1272 aaKnown RBP9.68□□□□□ -0.86
ABCA13-207ENST00000544596 FAM193AP78312 1265 aa9.68□□□□□ -0.86
ABCA13-207ENST00000544596 TTC16Q8NEE8 873 aa9.68□□□□□ -0.86
ABCA13-207ENST00000544596 ZNF76P36508 570 aa9.68□□□□□ -0.86
ABCA13-207ENST00000544596 CRBNQ96SW2 442 aa9.68□□□□□ -0.86
ABCA13-207ENST00000544596 NF2P35240 595 aa9.68□□□□□ -0.86
ABCA13-207ENST00000544596 API5Q9BZZ5 524 aaKnown RBP9.68□□□□□ -0.86
ABCA13-207ENST00000544596 EVC2Q86UK5 1308 aa9.68□□□□□ -0.86
ABCA13-207ENST00000544596 GOLGA6L7A0A1B0GV03 622 aa9.68□□□□□ -0.86
ABCA13-207ENST00000544596 ANAPC15P60006 121 aa9.68□□□□□ -0.86
ABCA13-207ENST00000544596 TTC39AQ5SRH9 613 aa9.68□□□□□ -0.86
ABCA13-207ENST00000544596 LEKR1Q6ZMV7 388 aa9.68□□□□□ -0.86
ABCA13-207ENST00000544596 KINO60870 393 aaKnown RBP9.67□□□□□ -0.86
ABCA13-207ENST00000544596 LNPKQ9C0E8 428 aa9.67□□□□□ -0.86
ABCA13-207ENST00000544596 UBTFL1P0CB47 393 aaPredicted RBP9.67□□□□□ -0.86
ABCA13-207ENST00000544596 DDX19BQ9UMR2 479 aa9.67□□□□□ -0.86
ABCA13-207ENST00000544596 PIBF1Q8WXW3 757 aa9.67□□□□□ -0.86
ABCA13-207ENST00000544596 SOGA3Q5TF21 947 aa9.67□□□□□ -0.86
ABCA13-207ENST00000544596 FAM177A1Q8N128 213 aaPredicted RBP9.67□□□□□ -0.86
ABCA13-207ENST00000544596 COMMD10Q9Y6G5 202 aa9.67□□□□□ -0.86
ABCA13-207ENST00000544596 TRIM21P19474 475 aaKnown RBP9.67□□□□□ -0.86
ABCA13-207ENST00000544596 GRIPAP1Q4V328 841 aa9.67□□□□□ -0.86
ABCA13-207ENST00000544596 TAF3Q5VWG9 929 aa9.67□□□□□ -0.86
ABCA13-207ENST00000544596 NUP133Q8WUM0 1156 aa9.67□□□□□ -0.86
ABCA13-207ENST00000544596 PSMA5P28066 241 aa9.67□□□□□ -0.86
ABCA13-207ENST00000544596 WDR78Q5VTH9 848 aa9.67□□□□□ -0.86
ABCA13-207ENST00000544596 PDE4AP27815 886 aa9.66□□□□□ -0.86
ABCA13-207ENST00000544596 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.66□□□□□ -0.86
ABCA13-207ENST00000544596 KIAA0754O94854 1291 aa9.66□□□□□ -0.86
ABCA13-207ENST00000544596 ERC1Q8IUD2 1116 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms