RNA–Protein interactions for RNA: ENST00000544497.1

DDX47-211, Transcript of DEAD-box helicase 47, humanhuman

TSL 2

Gene DDX47, Length 628 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX47-211ENST00000544497 PKD2L1Q9P0L9 805 aa11.73□□□□□ -0.53
DDX47-211ENST00000544497 ATP6V1AP38606 617 aa11.72□□□□□ -0.53
DDX47-211ENST00000544497 RPIAP49247 311 aa11.72□□□□□ -0.53
DDX47-211ENST00000544497 IRF6O14896 467 aa11.71□□□□□ -0.53
DDX47-211ENST00000544497 SULF1Q8IWU6 871 aa11.71□□□□□ -0.53
DDX47-211ENST00000544497 NLRP7Q8WX94 980 aa11.71□□□□□ -0.53
DDX47-211ENST00000544497 POTECB2RU33 542 aa11.7□□□□□ -0.54
DDX47-211ENST00000544497 FMNL1O95466 1100 aaPredicted RBP11.7□□□□□ -0.54
DDX47-211ENST00000544497 GCGRP47871 477 aa11.7□□□□□ -0.54
DDX47-211ENST00000544497 FOXC1Q12948 553 aa11.7□□□□□ -0.54
DDX47-211ENST00000544497 FCF1Q9Y324 198 aaKnown RBP11.7□□□□□ -0.54
DDX47-211ENST00000544497 SLC27A5Q9Y2P5 690 aa11.69□□□□□ -0.54
DDX47-211ENST00000544497 ST8SIA5O15466 376 aa11.68□□□□□ -0.54
DDX47-211ENST00000544497 FAM160A2Q8N612 972 aaPredicted RBP11.68□□□□□ -0.54
DDX47-211ENST00000544497 AAASQ9NRG9 546 aa11.68□□□□□ -0.54
DDX47-211ENST00000544497 SALL2Q9Y467 1007 aaPredicted RBP11.68□□□□□ -0.54
DDX47-211ENST00000544497 PHOX2BQ99453 314 aa11.67□□□□□ -0.54
DDX47-211ENST00000544497 CD2BP2O95400 341 aaKnown RBP11.66□□□□□ -0.54
DDX47-211ENST00000544497 PRDM9Q9NQV7 894 aa11.65□□□□□ -0.54
DDX47-211ENST00000544497 AMHR2Q16671 573 aa11.64□□□□□ -0.55
DDX47-211ENST00000544497 BRICD5Q6PL45 260 aa11.64□□□□□ -0.55
DDX47-211ENST00000544497 TOR4AQ9NXH8 423 aa11.64□□□□□ -0.55
DDX47-211ENST00000544497 TTLL12Q14166 644 aaPredicted RBP11.63□□□□□ -0.55
DDX47-211ENST00000544497 MSS51Q4VC12 460 aa11.63□□□□□ -0.55
DDX47-211ENST00000544497 CRIPAKQ8N1N5 446 aa11.63□□□□□ -0.55
DDX47-211ENST00000544497 FAM117AQ9C073 453 aa11.63□□□□□ -0.55
DDX47-211ENST00000544497 PARP9Q8IXQ6 854 aa11.62□□□□□ -0.55
DDX47-211ENST00000544497 AVPP01185 164 aa11.61□□□□□ -0.55
DDX47-211ENST00000544497 GRIPAP1Q4V328 841 aa11.61□□□□□ -0.55
DDX47-211ENST00000544497 CYP4X1Q8N118 509 aa11.61□□□□□ -0.55
DDX47-211ENST00000544497 RNF19BQ6ZMZ0 732 aa11.6□□□□□ -0.55
DDX47-211ENST00000544497 DDRGK1Q96HY6 314 aa11.59□□□□□ -0.55
DDX47-211ENST00000544497 ZBTB24O43167 697 aaPredicted RBP11.58□□□□□ -0.56
DDX47-211ENST00000544497 CTC1Q2NKJ3 1217 aa11.56□□□□□ -0.56
DDX47-211ENST00000544497 Q3C1V9 767 aa11.56□□□□□ -0.56
DDX47-211ENST00000544497 DACH1Q9UI36 760 aa11.56□□□□□ -0.56
DDX47-211ENST00000544497 AXIN1O15169 862 aa11.55□□□□□ -0.56
DDX47-211ENST00000544497 CD46P15529 392 aa11.55□□□□□ -0.56
DDX47-211ENST00000544497 SMCPP49901 116 aaPredicted RBP11.54□□□□□ -0.56
DDX47-211ENST00000544497 TREML4Q6UXN2 200 aa11.54□□□□□ -0.56
DDX47-211ENST00000544497 PLEKHG3A1L390 1219 aa11.53□□□□□ -0.56
DDX47-211ENST00000544497 TTC24A2A3L6 582 aaPredicted RBP11.53□□□□□ -0.56
DDX47-211ENST00000544497 MMP16P51512 607 aa11.53□□□□□ -0.56
DDX47-211ENST00000544497 GIGYF2Q6Y7W6 1299 aaKnown RBP11.53□□□□□ -0.56
DDX47-211ENST00000544497 WNT7AO00755 349 aa11.52□□□□□ -0.57
DDX47-211ENST00000544497 TRIM32Q13049 653 aa11.51□□□□□ -0.57
DDX47-211ENST00000544497 LCE2AQ5TA79 106 aaPredicted RBP11.51□□□□□ -0.57
DDX47-211ENST00000544497 GMPR2Q9P2T1 348 aaKnown RBP11.51□□□□□ -0.57
DDX47-211ENST00000544497 KDM4AO75164 1064 aa11.5□□□□□ -0.57
DDX47-211ENST00000544497 SNIP1Q8TAD8 396 aaKnown RBP11.49□□□□□ -0.57
DDX47-211ENST00000544497 USB1Q9BQ65 265 aaKnown RBP11.49□□□□□ -0.57
DDX47-211ENST00000544497 C11orf95C9JLR9 678 aaPredicted RBP11.48□□□□□ -0.57
DDX47-211ENST00000544497 DXOO77932 396 aaKnown RBP11.48□□□□□ -0.57
DDX47-211ENST00000544497 CLCN1P35523 988 aa11.48□□□□□ -0.57
DDX47-211ENST00000544497 MDM2Q00987 491 aaPredicted RBP11.48□□□□□ -0.57
DDX47-211ENST00000544497 CCDC180Q9P1Z9 1646 aa11.48□□□□□ -0.57
DDX47-211ENST00000544497 MS4A1P11836 297 aa11.47□□□□□ -0.57
DDX47-211ENST00000544497 SMPD1P17405 629 aa11.47□□□□□ -0.57
DDX47-211ENST00000544497 USP46P62068 366 aa11.47□□□□□ -0.57
DDX47-211ENST00000544497 REPIN1Q9BWE0 567 aaKnown RBP11.47□□□□□ -0.57
DDX47-211ENST00000544497 SUPT5HO00267 1087 aaKnown RBP11.46□□□□□ -0.57
DDX47-211ENST00000544497 MRGPRX2Q96LB1 330 aa11.45□□□□□ -0.58
DDX47-211ENST00000544497 GPCPD1Q9NPB8 672 aa11.45□□□□□ -0.58
DDX47-211ENST00000544497 HLA-CQ95604 372 aa11.44□□□□□ -0.58
DDX47-211ENST00000544497 HOXA2O43364 376 aa11.43□□□□□ -0.58
DDX47-211ENST00000544497 J3QL48 77 aa11.41□□□□□ -0.58
DDX47-211ENST00000544497 WFS1O76024 890 aa11.41□□□□□ -0.58
DDX47-211ENST00000544497 CCDC24Q8N4L8 307 aa11.41□□□□□ -0.58
DDX47-211ENST00000544497 SSTR3P32745 418 aaPredicted RBP11.4□□□□□ -0.58
DDX47-211ENST00000544497 PCMTD1Q96MG8 357 aaPredicted RBP11.4□□□□□ -0.58
DDX47-211ENST00000544497 GOPCQ9HD26 462 aa11.4□□□□□ -0.58
DDX47-211ENST00000544497 ATP13A2Q9NQ11 1180 aa11.4□□□□□ -0.58
DDX47-211ENST00000544497 WNT7BP56706 349 aa11.39□□□□□ -0.59
DDX47-211ENST00000544497 ARXQ96QS3 562 aa11.38□□□□□ -0.59
DDX47-211ENST00000544497 ATP1B4Q9UN42 357 aaPredicted RBP11.38□□□□□ -0.59
DDX47-211ENST00000544497 JUNDP17535 347 aa11.37□□□□□ -0.59
DDX47-211ENST00000544497 SKOR1P84550 965 aa11.37□□□□□ -0.59
DDX47-211ENST00000544497 GUCA2AQ02747 115 aa11.37□□□□□ -0.59
DDX47-211ENST00000544497 NFX1Q12986 1120 aaKnown RBP11.37□□□□□ -0.59
DDX47-211ENST00000544497 RC3H1Q5TC82 1133 aaKnown RBP11.37□□□□□ -0.59
DDX47-211ENST00000544497 ZMYND15Q9H091 742 aa11.37□□□□□ -0.59
DDX47-211ENST00000544497 HPS1Q92902 700 aa11.36□□□□□ -0.59
DDX47-211ENST00000544497 BEGAINQ9BUH8 593 aa11.36□□□□□ -0.59
DDX47-211ENST00000544497 TRIM47Q96LD4 638 aa11.35□□□□□ -0.59
DDX47-211ENST00000544497 SENP2Q9HC62 589 aa11.35□□□□□ -0.59
DDX47-211ENST00000544497 FAM217BQ9NTX9 383 aaPredicted RBP11.35□□□□□ -0.59
DDX47-211ENST00000544497 SNRPBP14678 240 aaKnown RBP11.34□□□□□ -0.59
DDX47-211ENST00000544497 SH3D19Q5HYK7 790 aa11.34□□□□□ -0.59
DDX47-211ENST00000544497 RSPH6AQ9H0K4 717 aa11.34□□□□□ -0.59
DDX47-211ENST00000544497 SYMPKQ92797 1274 aaKnown RBP11.33□□□□□ -0.6
DDX47-211ENST00000544497 FLIIQ13045 1269 aa11.32□□□□□ -0.6
DDX47-211ENST00000544497 RETREG3Q86VR2 466 aa11.32□□□□□ -0.6
DDX47-211ENST00000544497 WIPF1O43516 503 aa11.31□□□□□ -0.6
DDX47-211ENST00000544497 NUTM1Q86Y26 1132 aa11.31□□□□□ -0.6
DDX47-211ENST00000544497 KIFC2Q96AC6 838 aa11.31□□□□□ -0.6
DDX47-211ENST00000544497 NUDT12Q9BQG2 462 aa11.3□□□□□ -0.6
DDX47-211ENST00000544497 SKIV2LQ15477 1246 aaKnown RBP11.29□□□□□ -0.6
DDX47-211ENST00000544497 TERTO14746 1132 aaKnown RBP11.28□□□□□ -0.6
DDX47-211ENST00000544497 ALDH1A1P00352 501 aa11.28□□□□□ -0.6
DDX47-211ENST00000544497 HOMEZQ8IX15 550 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms