RNA–Protein interactions for RNA: ENST00000544223.6

HCFC2-202, Transcript of host cell factor C2, humanhuman

TSL 2

Gene HCFC2, Length 2,538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-202ENST00000544223 TMEM2Q9UHN6 1383 aa18.47■□□□□ 0.55
HCFC2-202ENST00000544223 FKBP8Q14318 412 aa18.47■□□□□ 0.55
HCFC2-202ENST00000544223 NSD3Q9BZ95 1437 aa18.47■□□□□ 0.55
HCFC2-202ENST00000544223 NCKAP5LQ9HCH0 1330 aa18.46■□□□□ 0.55
HCFC2-202ENST00000544223 CDK19Q9BWU1 502 aa18.45■□□□□ 0.54
HCFC2-202ENST00000544223 SETD1AO15047 1707 aaKnown RBP18.44■□□□□ 0.54
HCFC2-202ENST00000544223 NUTM2FA1L443 756 aa18.44■□□□□ 0.54
HCFC2-202ENST00000544223 ZBED9Q6R2W3 1325 aa18.43■□□□□ 0.54
HCFC2-202ENST00000544223 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.42■□□□□ 0.54
HCFC2-202ENST00000544223 ADAMTS8Q9UP79 889 aa18.42■□□□□ 0.54
HCFC2-202ENST00000544223 LRPPRCP42704 1394 aaKnown RBP18.42■□□□□ 0.54
HCFC2-202ENST00000544223 CABP1Q9NZU7 370 aa18.41■□□□□ 0.54
HCFC2-202ENST00000544223 RIMS1Q86UR5 1692 aaKnown RBP18.4■□□□□ 0.54
HCFC2-202ENST00000544223 SLC24A1O60721 1099 aa18.39■□□□□ 0.53
HCFC2-202ENST00000544223 A0A1W2PP64 1363 aa18.38■□□□□ 0.53
HCFC2-202ENST00000544223 MORC1Q86VD1 984 aa18.38■□□□□ 0.53
HCFC2-202ENST00000544223 CCDC146Q8IYE0 955 aa18.38■□□□□ 0.53
HCFC2-202ENST00000544223 GGNBP2Q9H3C7 697 aa18.38■□□□□ 0.53
HCFC2-202ENST00000544223 FBLN1P23142 703 aa18.37■□□□□ 0.53
HCFC2-202ENST00000544223 ADAMTS13Q76LX8 1427 aa18.37■□□□□ 0.53
HCFC2-202ENST00000544223 RBM33Q96EV2 1170 aaKnown RBP18.36■□□□□ 0.53
HCFC2-202ENST00000544223 ROBO2Q9HCK4 1378 aa18.36■□□□□ 0.53
HCFC2-202ENST00000544223 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.35■□□□□ 0.53
HCFC2-202ENST00000544223 HDGFP51858 240 aaKnown RBP18.35■□□□□ 0.53
HCFC2-202ENST00000544223 NLRP1Q9C000 1473 aa18.35■□□□□ 0.53
HCFC2-202ENST00000544223 EID1Q9Y6B2 187 aa18.34■□□□□ 0.53
HCFC2-202ENST00000544223 ABCC11Q96J66 1382 aa18.34■□□□□ 0.53
HCFC2-202ENST00000544223 CDCA7LQ96GN5 454 aa18.34■□□□□ 0.53
HCFC2-202ENST00000544223 ANKRD36BQ8N2N9 1353 aa18.33■□□□□ 0.52
HCFC2-202ENST00000544223 PTPRUQ92729 1446 aa18.32■□□□□ 0.52
HCFC2-202ENST00000544223 WDR43Q15061 677 aaKnown RBP eCLIP18.32■□□□□ 0.52
HCFC2-202ENST00000544223 CD163L1Q9NR16 1453 aa18.32■□□□□ 0.52
HCFC2-202ENST00000544223 CGNL1Q0VF96 1302 aa18.31■□□□□ 0.52
HCFC2-202ENST00000544223 THEMISQ8N1K5 641 aaPredicted RBP18.31■□□□□ 0.52
HCFC2-202ENST00000544223 WASLO00401 505 aaPredicted RBP18.3■□□□□ 0.52
HCFC2-202ENST00000544223 AMOTL2Q9Y2J4 779 aa18.3■□□□□ 0.52
HCFC2-202ENST00000544223 MTHFSP49914 203 aa18.29■□□□□ 0.52
HCFC2-202ENST00000544223 PLEKHG1Q9ULL1 1385 aa18.29■□□□□ 0.52
HCFC2-202ENST00000544223 ZRANB1Q9UGI0 708 aa18.29■□□□□ 0.52
HCFC2-202ENST00000544223 NPC1L1Q9UHC9 1359 aa18.29■□□□□ 0.52
HCFC2-202ENST00000544223 FYB1O15117 783 aa18.28■□□□□ 0.52
HCFC2-202ENST00000544223 NEFLP07196 543 aa18.28■□□□□ 0.52
HCFC2-202ENST00000544223 ATAD2Q6PL18 1390 aa18.27■□□□□ 0.52
HCFC2-202ENST00000544223 NUDT16Q96DE0 195 aaKnown RBP18.27■□□□□ 0.52
HCFC2-202ENST00000544223 PRR36Q9H6K5 1346 aa18.26■□□□□ 0.51
HCFC2-202ENST00000544223 TERF2IPQ9NYB0 399 aa18.26■□□□□ 0.51
HCFC2-202ENST00000544223 DLC1Q96QB1 1528 aa18.26■□□□□ 0.51
HCFC2-202ENST00000544223 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.25■□□□□ 0.51
HCFC2-202ENST00000544223 CEP170BQ9Y4F5 1589 aaPredicted RBP18.25■□□□□ 0.51
HCFC2-202ENST00000544223 PPIP5K1Q6PFW1 1433 aa18.24■□□□□ 0.51
HCFC2-202ENST00000544223 SLIT1O75093 1534 aa18.24■□□□□ 0.51
HCFC2-202ENST00000544223 ARHGAP23Q9P227 1491 aa18.24■□□□□ 0.51
HCFC2-202ENST00000544223 HDGFL2Q7Z4V5 671 aaPredicted RBP18.24■□□□□ 0.51
HCFC2-202ENST00000544223 PUS7Q96PZ0 661 aaKnown RBP18.24■□□□□ 0.51
HCFC2-202ENST00000544223 NUDCQ9Y266 331 aa18.24■□□□□ 0.51
HCFC2-202ENST00000544223 BLMP54132 1417 aaPredicted RBP18.23■□□□□ 0.51
HCFC2-202ENST00000544223 KCNA6P17658 529 aa18.23■□□□□ 0.51
HCFC2-202ENST00000544223 APAF1O14727 1248 aa18.23■□□□□ 0.51
HCFC2-202ENST00000544223 PPM1GO15355 546 aaPredicted RBP18.23■□□□□ 0.51
HCFC2-202ENST00000544223 ADAMTSL3P82987 1691 aa18.23■□□□□ 0.51
HCFC2-202ENST00000544223 NEUROD2Q15784 382 aa18.22■□□□□ 0.51
HCFC2-202ENST00000544223 NME9Q86XW9 330 aa18.22■□□□□ 0.51
HCFC2-202ENST00000544223 MED14O60244 1454 aa18.21■□□□□ 0.51
HCFC2-202ENST00000544223 RRP7AQ9Y3A4 280 aaKnown RBP18.21■□□□□ 0.51
HCFC2-202ENST00000544223 PMFBP1Q8TBY8 1022 aa18.21■□□□□ 0.51
HCFC2-202ENST00000544223 CPS1P31327 1500 aa18.2■□□□□ 0.5
HCFC2-202ENST00000544223 TECPR2O15040 1411 aa18.2■□□□□ 0.5
HCFC2-202ENST00000544223 SMG6Q86US8 1419 aaKnown RBP18.2■□□□□ 0.5
HCFC2-202ENST00000544223 FAM135BQ49AJ0 1406 aa18.19■□□□□ 0.5
HCFC2-202ENST00000544223 TBX22Q9Y458 520 aa18.19■□□□□ 0.5
HCFC2-202ENST00000544223 KNDC1Q76NI1 1749 aa18.19■□□□□ 0.5
HCFC2-202ENST00000544223 DMRT2Q9Y5R5 561 aa18.18■□□□□ 0.5
HCFC2-202ENST00000544223 CCDC61Q9Y6R9 512 aa18.18■□□□□ 0.5
HCFC2-202ENST00000544223 SOX12O15370 315 aa18.17■□□□□ 0.5
HCFC2-202ENST00000544223 USP32Q8NFA0 1604 aa18.17■□□□□ 0.5
HCFC2-202ENST00000544223 SPINK5Q9NQ38 1064 aaPredicted RBP18.17■□□□□ 0.5
HCFC2-202ENST00000544223 ANKLE2Q86XL3 938 aa18.16■□□□□ 0.5
HCFC2-202ENST00000544223 SHPRHQ149N8 1683 aa18.16■□□□□ 0.5
HCFC2-202ENST00000544223 NINLQ9Y2I6 1382 aa18.16■□□□□ 0.5
HCFC2-202ENST00000544223 ATP7BP35670 1465 aa18.16■□□□□ 0.5
HCFC2-202ENST00000544223 U2SURPO15042 1029 aaKnown RBP18.15■□□□□ 0.5
HCFC2-202ENST00000544223 POLR3AO14802 1390 aaPredicted RBP18.15■□□□□ 0.5
HCFC2-202ENST00000544223 RGPD8O14715 1765 aaPredicted RBP18.15■□□□□ 0.5
HCFC2-202ENST00000544223 U2AF1L5P0DN76 240 aaPredicted RBP18.14■□□□□ 0.49
HCFC2-202ENST00000544223 U2AF1Q01081 240 aaKnown RBP eCLIP18.14■□□□□ 0.49
HCFC2-202ENST00000544223 ACEP12821 1306 aa18.14■□□□□ 0.49
HCFC2-202ENST00000544223 RRS1Q15050 365 aaKnown RBP18.13■□□□□ 0.49
HCFC2-202ENST00000544223 EMILIN1Q9Y6C2 1016 aa18.13■□□□□ 0.49
HCFC2-202ENST00000544223 SIRT1Q96EB6 747 aa18.13■□□□□ 0.49
HCFC2-202ENST00000544223 NKTRP30414 1462 aaKnown RBP18.12■□□□□ 0.49
HCFC2-202ENST00000544223 PLIN1O60240 522 aa18.12■□□□□ 0.49
HCFC2-202ENST00000544223 CPSF1Q10570 1443 aaKnown RBP18.12■□□□□ 0.49
HCFC2-202ENST00000544223 KIF20BQ96Q89 1820 aa18.11■□□□□ 0.49
HCFC2-202ENST00000544223 SETD1BQ9UPS6 1966 aaKnown RBP18.11■□□□□ 0.49
HCFC2-202ENST00000544223 HSPA2P54652 639 aa18.1■□□□□ 0.49
HCFC2-202ENST00000544223 NSD2O96028 1365 aa18.1■□□□□ 0.49
HCFC2-202ENST00000544223 NUTM2GQ5VZR2 741 aa18.1■□□□□ 0.49
HCFC2-202ENST00000544223 CFAP53Q96M91 514 aa18.1■□□□□ 0.49
HCFC2-202ENST00000544223 PLEKHG5O94827 1062 aa18.09■□□□□ 0.49
HCFC2-202ENST00000544223 POLKQ9UBT6 870 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms