RNA–Protein interactions for RNA: ENST00000544142.5

PASK-215, Transcript of PAS domain containing serine/threonine kinase, human

APPRIS P3 TSL 5 BASIC

Gene PASK, Length 4,724 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PASK-215	ENST00000544142	TSR1	Q2NL82	804 aa	Known RBP	13.94	□□□□□ -0.18
PASK-215	ENST00000544142	DZIP1L	Q8IYY4	767 aa	Known RBP	13.94	□□□□□ -0.18
PASK-215	ENST00000544142	MTERF4	Q7Z6M4	381 aa	Known RBP	13.93	□□□□□ -0.18
PASK-215	ENST00000544142	C22orf23	Q9BZE7	217 aa		13.93	□□□□□ -0.18
PASK-215	ENST00000544142	TPM1	P09493	284 aa		13.93	□□□□□ -0.18
PASK-215	ENST00000544142	TEX35	Q5T0J7	233 aa		13.93	□□□□□ -0.18
PASK-215	ENST00000544142	PANK1	Q8TE04	598 aa		13.92	□□□□□ -0.18
PASK-215	ENST00000544142	TPD52L1	Q16890	204 aa	Predicted RBP	13.92	□□□□□ -0.18
PASK-215	ENST00000544142	TRAK1	Q9UPV9	953 aa		13.91	□□□□□ -0.18
PASK-215	ENST00000544142	PES1	O00541	588 aa	Known RBP	13.91	□□□□□ -0.18
PASK-215	ENST00000544142	ZKSCAN1	P17029	563 aa	Predicted RBP	13.91	□□□□□ -0.18
PASK-215	ENST00000544142	DIAPH3	Q9NSV4	1193 aa		13.91	□□□□□ -0.18
PASK-215	ENST00000544142	GPATCH8	Q9UKJ3	1502 aa	Known RBP	13.91	□□□□□ -0.18
PASK-215	ENST00000544142	AAMP	Q13685	434 aa		13.91	□□□□□ -0.18
PASK-215	ENST00000544142	RUFY2	Q8WXA3	655 aa		13.91	□□□□□ -0.18
PASK-215	ENST00000544142	TOMM22	Q9NS69	142 aa		13.91	□□□□□ -0.18
PASK-215	ENST00000544142	CSB-PGBD3	P0DP91	1061 aa		13.9	□□□□□ -0.18
PASK-215	ENST00000544142	PLEKHH2	Q8IVE3	1493 aa		13.9	□□□□□ -0.18
PASK-215	ENST00000544142	NASP	P49321	788 aa	Predicted RBP	13.9	□□□□□ -0.18
PASK-215	ENST00000544142	CCDC70	Q6NSX1	233 aa		13.9	□□□□□ -0.18
PASK-215	ENST00000544142	NUP160	Q12769	1436 aa		13.89	□□□□□ -0.19
PASK-215	ENST00000544142	NCOA1	Q15788	1441 aa		13.89	□□□□□ -0.19
PASK-215	ENST00000544142	HOMER1	Q86YM7	354 aa		13.89	□□□□□ -0.19
PASK-215	ENST00000544142	CEP89	Q96ST8	783 aa		13.89	□□□□□ -0.19
PASK-215	ENST00000544142	R3HCC1	Q9Y3T6	440 aa	Known RBP	13.89	□□□□□ -0.19
PASK-215	ENST00000544142	NBPF8	Q3BBV2	869 aa		13.89	□□□□□ -0.19
PASK-215	ENST00000544142	ANKRD30B	Q9BXX2	1392 aa		13.89	□□□□□ -0.19
PASK-215	ENST00000544142	TRAK2	O60296	914 aa		13.89	□□□□□ -0.19
PASK-215	ENST00000544142	MCTP1	Q6DN14	999 aa		13.89	□□□□□ -0.19
PASK-215	ENST00000544142	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	13.89	□□□□□ -0.19
PASK-215	ENST00000544142	API5	Q9BZZ5	524 aa	Known RBP	13.89	□□□□□ -0.19
PASK-215	ENST00000544142	ADAMTS8	Q9UP79	889 aa		13.89	□□□□□ -0.19
PASK-215	ENST00000544142	AMPH	P49418	695 aa		13.89	□□□□□ -0.19
PASK-215	ENST00000544142	NCBP3	Q53F19	620 aa	Known RBP	13.88	□□□□□ -0.19
PASK-215	ENST00000544142	CPLX2	Q6PUV4	134 aa	Known RBP	13.88	□□□□□ -0.19
PASK-215	ENST00000544142	BICD2	Q8TD16	824 aa		13.88	□□□□□ -0.19
PASK-215	ENST00000544142	LNPK	Q9C0E8	428 aa		13.88	□□□□□ -0.19
PASK-215	ENST00000544142	ANO2	Q9NQ90	1003 aa		13.88	□□□□□ -0.19
PASK-215	ENST00000544142	ATP10B	O94823	1461 aa		13.87	□□□□□ -0.19
PASK-215	ENST00000544142	CCDC141	Q6ZP82	1450 aa		13.87	□□□□□ -0.19
PASK-215	ENST00000544142	MAGI3	Q5TCQ9	1506 aa		13.87	□□□□□ -0.19
PASK-215	ENST00000544142	INTS3	Q68E01	1043 aa	Known RBP	13.87	□□□□□ -0.19
PASK-215	ENST00000544142	BRD4	O60885	1362 aa	Predicted RBP	13.87	□□□□□ -0.19
PASK-215	ENST00000544142	IPO7	O95373	1038 aa	Known RBP	13.87	□□□□□ -0.19
PASK-215	ENST00000544142	PNISR	Q8TF01	805 aa	Known RBP	13.86	□□□□□ -0.19
PASK-215	ENST00000544142	PKNOX2	Q96KN3	472 aa		13.86	□□□□□ -0.19
PASK-215	ENST00000544142	ITSN2	Q9NZM3	1697 aa		13.86	□□□□□ -0.19
PASK-215	ENST00000544142	TPM2	P07951	284 aa		13.86	□□□□□ -0.19
PASK-215	ENST00000544142	NUTM2D	Q5VT03	806 aa	Predicted RBP	13.86	□□□□□ -0.19
PASK-215	ENST00000544142	IFT57	Q9NWB7	429 aa		13.86	□□□□□ -0.19
PASK-215	ENST00000544142	CCDC39	Q9UFE4	941 aa		13.86	□□□□□ -0.19
PASK-215	ENST00000544142	PDE4C	Q08493	712 aa		13.86	□□□□□ -0.19
PASK-215	ENST00000544142	ARGLU1	Q9NWB6	273 aa	Predicted RBP	13.86	□□□□□ -0.19
PASK-215	ENST00000544142	SMC3	Q9UQE7	1217 aa		13.85	□□□□□ -0.19
PASK-215	ENST00000544142	CEP170	Q5SW79	1584 aa		13.85	□□□□□ -0.19
PASK-215	ENST00000544142	VPS37C	A5D8V6	355 aa	Predicted RBP	13.85	□□□□□ -0.19
PASK-215	ENST00000544142	NGDN	Q8NEJ9	315 aa	Known RBP	13.85	□□□□□ -0.19
PASK-215	ENST00000544142	SASS6	Q6UVJ0	657 aa		13.85	□□□□□ -0.19
PASK-215	ENST00000544142	AFAP1	Q8N556	730 aa		13.84	□□□□□ -0.19
PASK-215	ENST00000544142	SKAP1	Q86WV1	359 aa		13.83	□□□□□ -0.19
PASK-215	ENST00000544142	AKAP17A	Q02040	695 aa	Known RBP	13.83	□□□□□ -0.2
PASK-215	ENST00000544142	MNS1	Q8NEH6	495 aa		13.83	□□□□□ -0.2
PASK-215	ENST00000544142	SMG6	Q86US8	1419 aa	Known RBP	13.83	□□□□□ -0.2
PASK-215	ENST00000544142	RNF20	Q5VTR2	975 aa		13.83	□□□□□ -0.2
PASK-215	ENST00000544142	RUNDC1	Q96C34	613 aa		13.83	□□□□□ -0.2
PASK-215	ENST00000544142	LTV1	Q96GA3	475 aa	Predicted RBP	13.82	□□□□□ -0.2
PASK-215	ENST00000544142	MARCH6	O60337	910 aa		13.82	□□□□□ -0.2
PASK-215	ENST00000544142	LRRFIP1	Q32MZ4	808 aa	Known RBP	13.82	□□□□□ -0.2
PASK-215	ENST00000544142	RNF214	Q8ND24	703 aa		13.82	□□□□□ -0.2
PASK-215	ENST00000544142	EVC2	Q86UK5	1308 aa		13.82	□□□□□ -0.2
PASK-215	ENST00000544142	ANKRD20A12P	Q8NF67	263 aa		13.82	□□□□□ -0.2
PASK-215	ENST00000544142	RPRD2	Q5VT52	1461 aa	Known RBP	13.82	□□□□□ -0.2
PASK-215	ENST00000544142	MBD3	O95983	291 aa		13.82	□□□□□ -0.2
PASK-215	ENST00000544142	RIPK4	P57078	832 aa		13.82	□□□□□ -0.2
PASK-215	ENST00000544142	CPLX1	O14810	134 aa		13.81	□□□□□ -0.2
PASK-215	ENST00000544142	SYNE3	Q6ZMZ3	975 aa		13.81	□□□□□ -0.2
PASK-215	ENST00000544142	HMGN5	P82970	282 aa	Known RBP	13.81	□□□□□ -0.2
PASK-215	ENST00000544142	CCDC73	Q6ZRK6	1079 aa		13.81	□□□□□ -0.2
PASK-215	ENST00000544142	WASHC2C	Q9Y4E1	1318 aa		13.81	□□□□□ -0.2
PASK-215	ENST00000544142	DIAPH1	O60610	1272 aa	Known RBP	13.8	□□□□□ -0.2
PASK-215	ENST00000544142	CDC45	O75419	566 aa		13.8	□□□□□ -0.2
PASK-215	ENST00000544142	TRIM29	Q14134	588 aa		13.8	□□□□□ -0.2
PASK-215	ENST00000544142	COG3	Q96JB2	828 aa		13.8	□□□□□ -0.2
PASK-215	ENST00000544142	IFIT2	P09913	472 aa	Known RBP	13.79	□□□□□ -0.2
PASK-215	ENST00000544142	RBM10	P98175	930 aa	Known RBP	13.79	□□□□□ -0.2
PASK-215	ENST00000544142	ACBD3	Q9H3P7	528 aa		13.79	□□□□□ -0.2
PASK-215	ENST00000544142	HOOK1	Q9UJC3	728 aa	Known RBP	13.79	□□□□□ -0.2
PASK-215	ENST00000544142	HSP90B2P	Q58FF3	399 aa		13.79	□□□□□ -0.2
PASK-215	ENST00000544142	CAVIN1	Q6NZI2	390 aa	Known RBP	13.79	□□□□□ -0.2
PASK-215	ENST00000544142	PDZRN3	Q9UPQ7	1066 aa		13.79	□□□□□ -0.2
PASK-215	ENST00000544142	BCAR3	O75815	825 aa		13.79	□□□□□ -0.2
PASK-215	ENST00000544142	DNMT1	P26358	1616 aa	Known RBP	13.79	□□□□□ -0.2
PASK-215	ENST00000544142	NOM1	Q5C9Z4	860 aa	Known RBP	13.79	□□□□□ -0.2
PASK-215	ENST00000544142	C9orf78	Q9NZ63	289 aa	Predicted RBP	13.79	□□□□□ -0.2
PASK-215	ENST00000544142	CCDC9	Q9Y3X0	531 aa	Known RBP	13.79	□□□□□ -0.2
PASK-215	ENST00000544142	CCDC173	Q0VFZ6	552 aa		13.78	□□□□□ -0.2
PASK-215	ENST00000544142	CCDC66	A2RUB6	948 aa		13.78	□□□□□ -0.2
PASK-215	ENST00000544142	NEXN	Q0ZGT2	675 aa		13.78	□□□□□ -0.2
PASK-215	ENST00000544142	TEF	Q10587	303 aa		13.77	□□□□□ -0.2
PASK-215	ENST00000544142	VGF	O15240	615 aa	Predicted RBP	13.76	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms