RNA–Protein interactions for RNA: ENST00000544131.1

CCDC170-203, Transcript of coiled-coil domain containing 170, humanhuman

TSL 4

Gene CCDC170, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC170-203ENST00000544131 DACH1Q9UI36 760 aa8.68□□□□□ -1.02
CCDC170-203ENST00000544131 LCE2AQ5TA79 106 aaPredicted RBP8.67□□□□□ -1.02
CCDC170-203ENST00000544131 BRICD5Q6PL45 260 aa8.67□□□□□ -1.02
CCDC170-203ENST00000544131 TREML4Q6UXN2 200 aa8.67□□□□□ -1.02
CCDC170-203ENST00000544131 CCDC102AQ96A19 550 aa8.67□□□□□ -1.02
CCDC170-203ENST00000544131 SALL2Q9Y467 1007 aaPredicted RBP8.67□□□□□ -1.02
CCDC170-203ENST00000544131 RNF19BQ6ZMZ0 732 aa8.66□□□□□ -1.02
CCDC170-203ENST00000544131 AXIN1O15169 862 aa8.65□□□□□ -1.02
CCDC170-203ENST00000544131 MDM2Q00987 491 aaPredicted RBP8.65□□□□□ -1.02
CCDC170-203ENST00000544131 MSS51Q4VC12 460 aa8.65□□□□□ -1.02
CCDC170-203ENST00000544131 BARGINQ6ZT62 677 aa8.65□□□□□ -1.02
CCDC170-203ENST00000544131 ZMYND10O75800 440 aa8.64□□□□□ -1.03
CCDC170-203ENST00000544131 GMPR2Q9P2T1 348 aaKnown RBP8.64□□□□□ -1.03
CCDC170-203ENST00000544131 ZBTB24O43167 697 aaPredicted RBP8.63□□□□□ -1.03
CCDC170-203ENST00000544131 CTC1Q2NKJ3 1217 aa8.63□□□□□ -1.03
CCDC170-203ENST00000544131 TTC24A2A3L6 582 aaPredicted RBP8.62□□□□□ -1.03
CCDC170-203ENST00000544131 C11orf95C9JLR9 678 aaPredicted RBP8.61□□□□□ -1.03
CCDC170-203ENST00000544131 SMCPP49901 116 aaPredicted RBP8.61□□□□□ -1.03
CCDC170-203ENST00000544131 GRIPAP1Q4V328 841 aa8.61□□□□□ -1.03
CCDC170-203ENST00000544131 WNT7AO00755 349 aa8.6□□□□□ -1.03
CCDC170-203ENST00000544131 TRIM32Q13049 653 aa8.6□□□□□ -1.03
CCDC170-203ENST00000544131 BCANQ96GW7 911 aa8.6□□□□□ -1.03
CCDC170-203ENST00000544131 MMP16P51512 607 aa8.59□□□□□ -1.03
CCDC170-203ENST00000544131 Q3C1V9 767 aa8.59□□□□□ -1.03
CCDC170-203ENST00000544131 WFS1O76024 890 aa8.58□□□□□ -1.04
CCDC170-203ENST00000544131 SMPD1P17405 629 aa8.58□□□□□ -1.04
CCDC170-203ENST00000544131 SNIP1Q8TAD8 396 aaKnown RBP8.58□□□□□ -1.04
CCDC170-203ENST00000544131 CD46P15529 392 aa8.57□□□□□ -1.04
CCDC170-203ENST00000544131 CLCN1P35523 988 aa8.57□□□□□ -1.04
CCDC170-203ENST00000544131 GPCPD1Q9NPB8 672 aa8.57□□□□□ -1.04
CCDC170-203ENST00000544131 MRGPRX2Q96LB1 330 aa8.56□□□□□ -1.04
CCDC170-203ENST00000544131 DXOO77932 396 aaKnown RBP8.55□□□□□ -1.04
CCDC170-203ENST00000544131 NFX1Q12986 1120 aaKnown RBP8.55□□□□□ -1.04
CCDC170-203ENST00000544131 TTLL12Q14166 644 aaPredicted RBP8.55□□□□□ -1.04
CCDC170-203ENST00000544131 USB1Q9BQ65 265 aaKnown RBP8.55□□□□□ -1.04
CCDC170-203ENST00000544131 REPIN1Q9BWE0 567 aaKnown RBP8.55□□□□□ -1.04
CCDC170-203ENST00000544131 ATP13A2Q9NQ11 1180 aa8.55□□□□□ -1.04
CCDC170-203ENST00000544131 J3QL48 77 aa8.54□□□□□ -1.04
CCDC170-203ENST00000544131 KDM4AO75164 1064 aa8.54□□□□□ -1.04
CCDC170-203ENST00000544131 FAM217BQ9NTX9 383 aaPredicted RBP8.54□□□□□ -1.04
CCDC170-203ENST00000544131 HLA-CQ95604 372 aa8.53□□□□□ -1.04
CCDC170-203ENST00000544131 AK7Q96M32 723 aa8.53□□□□□ -1.04
CCDC170-203ENST00000544131 SNRPBP14678 240 aaKnown RBP8.52□□□□□ -1.05
CCDC170-203ENST00000544131 SSTR3P32745 418 aaPredicted RBP8.52□□□□□ -1.05
CCDC170-203ENST00000544131 TRIM66O15016 1216 aa8.51□□□□□ -1.05
CCDC170-203ENST00000544131 AMHR2Q16671 573 aa8.51□□□□□ -1.05
CCDC170-203ENST00000544131 CCDC24Q8N4L8 307 aa8.51□□□□□ -1.05
CCDC170-203ENST00000544131 HPS1Q92902 700 aa8.51□□□□□ -1.05
CCDC170-203ENST00000544131 SLC24A3Q9HC58 644 aa8.51□□□□□ -1.05
CCDC170-203ENST00000544131 USP46P62068 366 aa8.5□□□□□ -1.05
CCDC170-203ENST00000544131 SKOR1P84550 965 aa8.5□□□□□ -1.05
CCDC170-203ENST00000544131 TRIM47Q96LD4 638 aa8.5□□□□□ -1.05
CCDC170-203ENST00000544131 HOXA2O43364 376 aa8.49□□□□□ -1.05
CCDC170-203ENST00000544131 WIPF1O43516 503 aa8.49□□□□□ -1.05
CCDC170-203ENST00000544131 RC3H1Q5TC82 1133 aaKnown RBP8.49□□□□□ -1.05
CCDC170-203ENST00000544131 NUTM1Q86Y26 1132 aa8.49□□□□□ -1.05
CCDC170-203ENST00000544131 SENP2Q9HC62 589 aa8.49□□□□□ -1.05
CCDC170-203ENST00000544131 WNT7BP56706 349 aa8.48□□□□□ -1.05
CCDC170-203ENST00000544131 LCE2CQ5TA81 110 aa8.48□□□□□ -1.05
CCDC170-203ENST00000544131 GIGYF2Q6Y7W6 1299 aaKnown RBP8.48□□□□□ -1.05
CCDC170-203ENST00000544131 GUCA2AQ02747 115 aa8.47□□□□□ -1.05
CCDC170-203ENST00000544131 STK17AQ9UEE5 414 aa8.47□□□□□ -1.05
CCDC170-203ENST00000544131 TERTO14746 1132 aaKnown RBP8.46□□□□□ -1.06
CCDC170-203ENST00000544131 PARP9Q8IXQ6 854 aa8.46□□□□□ -1.06
CCDC170-203ENST00000544131 JUNDP17535 347 aa8.45□□□□□ -1.06
CCDC170-203ENST00000544131 INSM1Q01101 510 aaPredicted RBP8.45□□□□□ -1.06
CCDC170-203ENST00000544131 PDE4DQ08499 809 aa8.45□□□□□ -1.06
CCDC170-203ENST00000544131 SYMPKQ92797 1274 aaKnown RBP8.45□□□□□ -1.06
CCDC170-203ENST00000544131 ALDH1A1P00352 501 aa8.44□□□□□ -1.06
CCDC170-203ENST00000544131 KIFC2Q96AC6 838 aa8.44□□□□□ -1.06
CCDC170-203ENST00000544131 BEGAINQ9BUH8 593 aa8.44□□□□□ -1.06
CCDC170-203ENST00000544131 MS4A1P11836 297 aa8.42□□□□□ -1.06
CCDC170-203ENST00000544131 SPIRE2Q8WWL2 714 aa8.42□□□□□ -1.06
CCDC170-203ENST00000544131 NDUFV2P19404 249 aa8.41□□□□□ -1.06
CCDC170-203ENST00000544131 RETREG3Q86VR2 466 aa8.41□□□□□ -1.06
CCDC170-203ENST00000544131 NUDT12Q9BQG2 462 aa8.41□□□□□ -1.06
CCDC170-203ENST00000544131 PTCRAQ6ISU1 281 aaPredicted RBP8.4□□□□□ -1.06
CCDC170-203ENST00000544131 EHBP1Q8NDI1 1231 aa8.4□□□□□ -1.06
CCDC170-203ENST00000544131 MOXD2PA6NHM9 499 aa8.39□□□□□ -1.07
CCDC170-203ENST00000544131 SIAH2O43255 324 aa8.39□□□□□ -1.07
CCDC170-203ENST00000544131 FDX1P10109 184 aa8.39□□□□□ -1.07
CCDC170-203ENST00000544131 BMP1P13497 986 aa8.39□□□□□ -1.07
CCDC170-203ENST00000544131 TBC1D2Q9BYX2 928 aa8.38□□□□□ -1.07
CCDC170-203ENST00000544131 PCDHGC3Q9UN70 934 aa8.38□□□□□ -1.07
CCDC170-203ENST00000544131 C6orf229H3BNL8 230 aa8.37□□□□□ -1.07
CCDC170-203ENST00000544131 TRIM46Q7Z4K8 759 aa8.37□□□□□ -1.07
CCDC170-203ENST00000544131 WASF2Q9Y6W5 498 aa8.36□□□□□ -1.07
CCDC170-203ENST00000544131 CAPN5O15484 640 aaPredicted RBP8.35□□□□□ -1.07
CCDC170-203ENST00000544131 CCNYL3P0C7X3 344 aa8.35□□□□□ -1.07
CCDC170-203ENST00000544131 SH3BP2P78314 561 aa8.35□□□□□ -1.07
CCDC170-203ENST00000544131 SLC16A10Q8TF71 515 aa8.35□□□□□ -1.07
CCDC170-203ENST00000544131 NXF1Q9UBU9 619 aaKnown RBP8.35□□□□□ -1.07
CCDC170-203ENST00000544131 DIXDC1Q155Q3 683 aa8.34□□□□□ -1.07
CCDC170-203ENST00000544131 PTPRNQ16849 979 aa8.33□□□□□ -1.08
CCDC170-203ENST00000544131 GMPRP36959 345 aa8.32□□□□□ -1.08
CCDC170-203ENST00000544131 LINC01559Q495D7 138 aa8.32□□□□□ -1.08
CCDC170-203ENST00000544131 RSBN1LQ6PCB5 846 aaPredicted RBP8.32□□□□□ -1.08
CCDC170-203ENST00000544131 RIC3Q7Z5B4 369 aa8.32□□□□□ -1.08
CCDC170-203ENST00000544131 UNC93B1Q9H1C4 597 aa8.32□□□□□ -1.08
CCDC170-203ENST00000544131 GPBP1L1Q9HC44 474 aaPredicted RBP8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms