RNA–Protein interactions for RNA: ENST00000544004.1

AP000439.1-201, humanhuman

TSL 4 BASIC

Gene AP000439.1, Length 581 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000439.1-201ENST00000544004 ROBO2Q9HCK4 1378 aa17.41■□□□□ 0.38
AP000439.1-201ENST00000544004 DEFB132Q7Z7B7 95 aa17.41■□□□□ 0.38
AP000439.1-201ENST00000544004 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.4■□□□□ 0.38
AP000439.1-201ENST00000544004 BRWD3Q6RI45 1802 aa17.4■□□□□ 0.38
AP000439.1-201ENST00000544004 LRP5O75197 1615 aa17.39■□□□□ 0.38
AP000439.1-201ENST00000544004 GLI3P10071 1580 aa17.39■□□□□ 0.37
AP000439.1-201ENST00000544004 NPHP3Q7Z494 1330 aa17.39■□□□□ 0.37
AP000439.1-201ENST00000544004 CLTCL1P53675 1640 aa17.39■□□□□ 0.37
AP000439.1-201ENST00000544004 ESCO1Q5FWF5 840 aa17.38■□□□□ 0.37
AP000439.1-201ENST00000544004 KIF1BO60333 1816 aa17.37■□□□□ 0.37
AP000439.1-201ENST00000544004 PXDNQ92626 1479 aa17.37■□□□□ 0.37
AP000439.1-201ENST00000544004 RALGAPBQ86X10 1494 aa17.37■□□□□ 0.37
AP000439.1-201ENST00000544004 XPCQ01831 940 aaPredicted RBP17.36■□□□□ 0.37
AP000439.1-201ENST00000544004 SF3B2Q13435 895 aaKnown RBP17.36■□□□□ 0.37
AP000439.1-201ENST00000544004 UNC5CLQ8IV45 518 aa17.36■□□□□ 0.37
AP000439.1-201ENST00000544004 FOXO3O43524 673 aa17.35■□□□□ 0.37
AP000439.1-201ENST00000544004 HFM1A2PYH4 1435 aa17.34■□□□□ 0.37
AP000439.1-201ENST00000544004 SLIT2O94813 1529 aa17.34■□□□□ 0.37
AP000439.1-201ENST00000544004 PRAG1Q86YV5 1406 aa17.33■□□□□ 0.36
AP000439.1-201ENST00000544004 VGFO15240 615 aaPredicted RBP17.32■□□□□ 0.36
AP000439.1-201ENST00000544004 ITGAEP38570 1179 aa17.32■□□□□ 0.36
AP000439.1-201ENST00000544004 CDC42BPGQ6DT37 1551 aa17.32■□□□□ 0.36
AP000439.1-201ENST00000544004 SEPT12Q8IYM1 358 aa17.31■□□□□ 0.36
AP000439.1-201ENST00000544004 LRPPRCP42704 1394 aaKnown RBP17.3■□□□□ 0.36
AP000439.1-201ENST00000544004 PSDA5PKW4 1024 aaPredicted RBP17.3■□□□□ 0.36
AP000439.1-201ENST00000544004 USP32Q8NFA0 1604 aa17.29■□□□□ 0.36
AP000439.1-201ENST00000544004 NUTM2FA1L443 756 aa17.28■□□□□ 0.36
AP000439.1-201ENST00000544004 HRCP23327 699 aa17.27■□□□□ 0.36
AP000439.1-201ENST00000544004 SPATA31A3Q5VYP0 1347 aa17.26■□□□□ 0.35
AP000439.1-201ENST00000544004 KRT27Q7Z3Y8 459 aa17.26■□□□□ 0.35
AP000439.1-201ENST00000544004 NAIPQ13075 1403 aa17.26■□□□□ 0.35
AP000439.1-201ENST00000544004 BAG6P46379 1132 aa17.25■□□□□ 0.35
AP000439.1-201ENST00000544004 VPS72Q15906 364 aa17.25■□□□□ 0.35
AP000439.1-201ENST00000544004 CCDC9Q9Y3X0 531 aaKnown RBP17.25■□□□□ 0.35
AP000439.1-201ENST00000544004 PPLO60437 1756 aa17.25■□□□□ 0.35
AP000439.1-201ENST00000544004 PLCH1Q4KWH8 1693 aa17.24■□□□□ 0.35
AP000439.1-201ENST00000544004 ONECUT3O60422 494 aaPredicted RBP17.24■□□□□ 0.35
AP000439.1-201ENST00000544004 RPGRIP1LQ68CZ1 1315 aa17.23■□□□□ 0.35
AP000439.1-201ENST00000544004 HAP1P54257 671 aaPredicted RBP17.23■□□□□ 0.35
AP000439.1-201ENST00000544004 NWD2Q9ULI1 1742 aa17.23■□□□□ 0.35
AP000439.1-201ENST00000544004 WAPLQ7Z5K2 1190 aa17.22■□□□□ 0.35
AP000439.1-201ENST00000544004 KIF1AQ12756 1690 aa17.22■□□□□ 0.35
AP000439.1-201ENST00000544004 CCDC144AA2RUR9 1427 aa17.21■□□□□ 0.35
AP000439.1-201ENST00000544004 KRT28Q7Z3Y7 464 aa17.21■□□□□ 0.35
AP000439.1-201ENST00000544004 FMN2Q9NZ56 1722 aa17.21■□□□□ 0.35
AP000439.1-201ENST00000544004 PLEKHG5O94827 1062 aa17.2■□□□□ 0.34
AP000439.1-201ENST00000544004 CABLES1Q8TDN4 633 aa17.2■□□□□ 0.34
AP000439.1-201ENST00000544004 STK26Q9P289 416 aa17.2■□□□□ 0.34
AP000439.1-201ENST00000544004 A0A0G2JS52 829 aa17.19■□□□□ 0.34
AP000439.1-201ENST00000544004 MYT1Q01538 1121 aa17.19■□□□□ 0.34
AP000439.1-201ENST00000544004 RGPD8O14715 1765 aaPredicted RBP17.18■□□□□ 0.34
AP000439.1-201ENST00000544004 EN1Q05925 392 aaPredicted RBP17.18■□□□□ 0.34
AP000439.1-201ENST00000544004 ABCA3Q99758 1704 aa17.18■□□□□ 0.34
AP000439.1-201ENST00000544004 TECPR2O15040 1411 aa17.17■□□□□ 0.34
AP000439.1-201ENST00000544004 RGPD1P0DJD0 1748 aa17.17■□□□□ 0.34
AP000439.1-201ENST00000544004 R3HDM1Q15032 1099 aaKnown RBP17.17■□□□□ 0.34
AP000439.1-201ENST00000544004 TNS3Q68CZ2 1445 aa17.17■□□□□ 0.34
AP000439.1-201ENST00000544004 PLEKHH1Q9ULM0 1364 aa17.16■□□□□ 0.34
AP000439.1-201ENST00000544004 KNDC1Q76NI1 1749 aa17.16■□□□□ 0.34
AP000439.1-201ENST00000544004 PSME1Q06323 249 aa17.15■□□□□ 0.34
AP000439.1-201ENST00000544004 FAM98CQ17RN3 349 aaKnown RBP17.15■□□□□ 0.34
AP000439.1-201ENST00000544004 NRAPQ86VF7 1730 aa17.14■□□□□ 0.33
AP000439.1-201ENST00000544004 LMOD2Q6P5Q4 547 aa17.14■□□□□ 0.33
AP000439.1-201ENST00000544004 ADGRF5Q8IZF2 1346 aa17.14■□□□□ 0.33
AP000439.1-201ENST00000544004 FAM83GA6ND36 823 aa17.13■□□□□ 0.33
AP000439.1-201ENST00000544004 PHF8Q9UPP1 1060 aa17.13■□□□□ 0.33
AP000439.1-201ENST00000544004 ABCC11Q96J66 1382 aa17.13■□□□□ 0.33
AP000439.1-201ENST00000544004 IFT172Q9UG01 1749 aa17.13■□□□□ 0.33
AP000439.1-201ENST00000544004 FAM182BQ5T319 152 aa17.12■□□□□ 0.33
AP000439.1-201ENST00000544004 TMEM132EQ6IEE7 984 aa17.12■□□□□ 0.33
AP000439.1-201ENST00000544004 TNS1Q9HBL0 1735 aaKnown RBP17.11■□□□□ 0.33
AP000439.1-201ENST00000544004 SBNO1A3KN83 1393 aa17.11■□□□□ 0.33
AP000439.1-201ENST00000544004 RRBP1Q9P2E9 1410 aaKnown RBP17.11■□□□□ 0.33
AP000439.1-201ENST00000544004 YY1P25490 414 aa17.1■□□□□ 0.33
AP000439.1-201ENST00000544004 ARHGEF10O15013 1369 aa17.1■□□□□ 0.33
AP000439.1-201ENST00000544004 EZH2Q15910 746 aaKnown RBP17.09■□□□□ 0.33
AP000439.1-201ENST00000544004 BTG4Q9NY30 223 aa17.09■□□□□ 0.33
AP000439.1-201ENST00000544004 NRXN1Q9ULB1 1477 aa17.08■□□□□ 0.32
AP000439.1-201ENST00000544004 DISP2A7MBM2 1401 aa17.08■□□□□ 0.32
AP000439.1-201ENST00000544004 SLC4A1APQ9BWU0 796 aaKnown RBP17.08■□□□□ 0.32
AP000439.1-201ENST00000544004 YTHDC2Q9H6S0 1430 aaKnown RBP17.07■□□□□ 0.32
AP000439.1-201ENST00000544004 RGL3Q3MIN7 710 aa17.07■□□□□ 0.32
AP000439.1-201ENST00000544004 PPARGC1BQ86YN6 1023 aaKnown RBP17.07■□□□□ 0.32
AP000439.1-201ENST00000544004 COL14A1Q05707 1796 aaKnown RBP17.06■□□□□ 0.32
AP000439.1-201ENST00000544004 THSD7AQ9UPZ6 1657 aa17.04■□□□□ 0.32
AP000439.1-201ENST00000544004 PMFBP1Q8TBY8 1022 aa17.04■□□□□ 0.32
AP000439.1-201ENST00000544004 SIRT1Q96EB6 747 aa17.04■□□□□ 0.32
AP000439.1-201ENST00000544004 ANKRD30BQ9BXX2 1392 aa17.03■□□□□ 0.32
AP000439.1-201ENST00000544004 ADGRB2O60241 1585 aa17.03■□□□□ 0.32
AP000439.1-201ENST00000544004 SPATA31A5Q5VU36 1347 aa17.03■□□□□ 0.32
AP000439.1-201ENST00000544004 SPATA31A7Q8IWB4 1347 aa17.03■□□□□ 0.32
AP000439.1-201ENST00000544004 CAMKK2Q96RR4 588 aa17.03■□□□□ 0.32
AP000439.1-201ENST00000544004 PIK3C2GO75747 1445 aa17.03■□□□□ 0.32
AP000439.1-201ENST00000544004 TRPM3Q9HCF6 1732 aaPredicted RBP17.02■□□□□ 0.32
AP000439.1-201ENST00000544004 TRIM37O94972 964 aa17.02■□□□□ 0.32
AP000439.1-201ENST00000544004 SPATA31E1Q6ZUB1 1445 aa17.02■□□□□ 0.31
AP000439.1-201ENST00000544004 ALS2Q96Q42 1657 aa17.01■□□□□ 0.31
AP000439.1-201ENST00000544004 SAFB2Q14151 953 aaKnown RBP eCLIP17■□□□□ 0.31
AP000439.1-201ENST00000544004 APBA3O96018 575 aa16.99■□□□□ 0.31
AP000439.1-201ENST00000544004 FAM196AQ6ZSG2 479 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms