RNA–Protein interactions for RNA: ENST00000543872.6

SMG8-202, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMG8, Length 3,477 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-202ENST00000543872 DZIP1LQ8IYY4 767 aaKnown RBP15.78■□□□□ 0.12
SMG8-202ENST00000543872 SMAP1Q8IYB5 467 aaPredicted RBP15.77■□□□□ 0.12
SMG8-202ENST00000543872 WDR7Q9Y4E6 1490 aa15.77■□□□□ 0.12
SMG8-202ENST00000543872 TRPM1Q7Z4N2 1603 aa15.77■□□□□ 0.12
SMG8-202ENST00000543872 A2MP01023 1474 aa15.77■□□□□ 0.11
SMG8-202ENST00000543872 CEP170Q5SW79 1584 aa15.77■□□□□ 0.11
SMG8-202ENST00000543872 ZKSCAN2Q63HK3 967 aa15.76■□□□□ 0.11
SMG8-202ENST00000543872 PLEKHD1A6NEE1 506 aa15.76■□□□□ 0.11
SMG8-202ENST00000543872 PTMSP20962 102 aa15.76■□□□□ 0.11
SMG8-202ENST00000543872 SNX21Q969T3 373 aa15.76■□□□□ 0.11
SMG8-202ENST00000543872 ADGBQ8N7X0 1667 aa15.75■□□□□ 0.11
SMG8-202ENST00000543872 PIK3C2GO75747 1445 aa15.75■□□□□ 0.11
SMG8-202ENST00000543872 BAG4O95429 457 aaKnown RBP15.75■□□□□ 0.11
SMG8-202ENST00000543872 GAS2L2Q8NHY3 880 aa15.75■□□□□ 0.11
SMG8-202ENST00000543872 RBSNQ9H1K0 784 aa15.75■□□□□ 0.11
SMG8-202ENST00000543872 TAF7LQ5H9L4 462 aa15.74■□□□□ 0.11
SMG8-202ENST00000543872 PAXIP1Q6ZW49 1069 aaPredicted RBP15.74■□□□□ 0.11
SMG8-202ENST00000543872 SMC4Q9NTJ3 1288 aa15.74■□□□□ 0.11
SMG8-202ENST00000543872 TERF1P54274 439 aa15.74■□□□□ 0.11
SMG8-202ENST00000543872 KLHL40Q2TBA0 621 aa15.74■□□□□ 0.11
SMG8-202ENST00000543872 DNTTIP2Q5QJE6 756 aaKnown RBP15.73■□□□□ 0.11
SMG8-202ENST00000543872 MPNDQ8N594 471 aa15.73■□□□□ 0.11
SMG8-202ENST00000543872 NOL7Q9UMY1 257 aaKnown RBP15.73■□□□□ 0.11
SMG8-202ENST00000543872 K7ELQ4 463 aaPredicted RBP15.73■□□□□ 0.11
SMG8-202ENST00000543872 RBM25P49756 843 aaKnown RBP15.73■□□□□ 0.11
SMG8-202ENST00000543872 NGEFQ8N5V2 710 aa15.73■□□□□ 0.11
SMG8-202ENST00000543872 TSR2Q969E8 191 aaKnown RBP15.73■□□□□ 0.11
SMG8-202ENST00000543872 JARID2Q92833 1246 aaPredicted RBP15.72■□□□□ 0.11
SMG8-202ENST00000543872 ASXL1Q8IXJ9 1541 aa15.72■□□□□ 0.11
SMG8-202ENST00000543872 TSC1Q92574 1164 aa15.72■□□□□ 0.11
SMG8-202ENST00000543872 RBM27Q9P2N5 1060 aaKnown RBP15.72■□□□□ 0.11
SMG8-202ENST00000543872 ZMYM3Q14202 1370 aa15.71■□□□□ 0.11
SMG8-202ENST00000543872 PRIM1P49642 420 aaKnown RBP15.71■□□□□ 0.11
SMG8-202ENST00000543872 ZSCAN23Q3MJ62 389 aa15.71■□□□□ 0.11
SMG8-202ENST00000543872 RUNDC1Q96C34 613 aa15.71■□□□□ 0.11
SMG8-202ENST00000543872 PTMAP06454 111 aaKnown RBP15.71■□□□□ 0.11
SMG8-202ENST00000543872 RNF214Q8ND24 703 aa15.71■□□□□ 0.11
SMG8-202ENST00000543872 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.71■□□□□ 0.11
SMG8-202ENST00000543872 CLASP1Q7Z460 1538 aa15.71■□□□□ 0.11
SMG8-202ENST00000543872 DYNC1I1O14576 645 aa15.7■□□□□ 0.1
SMG8-202ENST00000543872 PRDM15P57071 1507 aaPredicted RBP15.7■□□□□ 0.1
SMG8-202ENST00000543872 CARD14Q9BXL6 1004 aa15.7■□□□□ 0.1
SMG8-202ENST00000543872 NCOA3Q9Y6Q9 1424 aa15.7■□□□□ 0.1
SMG8-202ENST00000543872 ZNF500O60304 480 aaPredicted RBP15.7■□□□□ 0.1
SMG8-202ENST00000543872 MORC1Q86VD1 984 aa15.7■□□□□ 0.1
SMG8-202ENST00000543872 ZKSCAN5Q9Y2L8 839 aa15.69■□□□□ 0.1
SMG8-202ENST00000543872 PRPF40AO75400 957 aaKnown RBP15.69■□□□□ 0.1
SMG8-202ENST00000543872 FOXD4L5Q5VV16 416 aaPredicted RBP15.69■□□□□ 0.1
SMG8-202ENST00000543872 FOXD4L4Q8WXT5 416 aaPredicted RBP15.69■□□□□ 0.1
SMG8-202ENST00000543872 FAM135AQ9P2D6 1515 aa15.68■□□□□ 0.1
SMG8-202ENST00000543872 EIF4G3O43432 1585 aaKnown RBP15.68■□□□□ 0.1
SMG8-202ENST00000543872 VGLL3A8MV65 326 aa15.68■□□□□ 0.1
SMG8-202ENST00000543872 TRIM27P14373 513 aa15.68■□□□□ 0.1
SMG8-202ENST00000543872 CBX1P83916 185 aa15.68■□□□□ 0.1
SMG8-202ENST00000543872 CSPP1Q1MSJ5 1256 aa15.68■□□□□ 0.1
SMG8-202ENST00000543872 MTERF4Q7Z6M4 381 aaKnown RBP15.68■□□□□ 0.1
SMG8-202ENST00000543872 KIF2CQ99661 725 aa15.68■□□□□ 0.1
SMG8-202ENST00000543872 PLA2R1Q13018 1463 aa15.68■□□□□ 0.1
SMG8-202ENST00000543872 ANKRD45Q5TZF3 282 aa15.68■□□□□ 0.1
SMG8-202ENST00000543872 PLB1Q6P1J6 1458 aa15.68■□□□□ 0.1
SMG8-202ENST00000543872 ABCC2Q92887 1545 aa15.68■□□□□ 0.1
SMG8-202ENST00000543872 SASS6Q6UVJ0 657 aa15.67■□□□□ 0.1
SMG8-202ENST00000543872 PLCD3Q8N3E9 789 aa15.67■□□□□ 0.1
SMG8-202ENST00000543872 CHAMP1Q96JM3 812 aa15.67■□□□□ 0.1
SMG8-202ENST00000543872 DDX19BQ9UMR2 479 aa15.67■□□□□ 0.1
SMG8-202ENST00000543872 FAM177BA6PVY3 158 aa15.67■□□□□ 0.1
SMG8-202ENST00000543872 EXOSC9Q06265 439 aaKnown RBP15.67■□□□□ 0.1
SMG8-202ENST00000543872 HDAC1Q13547 482 aaPredicted RBP15.67■□□□□ 0.1
SMG8-202ENST00000543872 WDR63Q8IWG1 891 aa15.66■□□□□ 0.1
SMG8-202ENST00000543872 PTPRGP23470 1445 aa15.66■□□□□ 0.1
SMG8-202ENST00000543872 ZNF445P59923 1031 aa15.66■□□□□ 0.1
SMG8-202ENST00000543872 DMTNQ08495 405 aa15.66■□□□□ 0.1
SMG8-202ENST00000543872 PKP1Q13835 747 aa15.66■□□□□ 0.1
SMG8-202ENST00000543872 HS1BP3Q53T59 392 aa15.66■□□□□ 0.1
SMG8-202ENST00000543872 TMEM57Q8N5G2 664 aa15.66■□□□□ 0.1
SMG8-202ENST00000543872 IPO4Q8TEX9 1081 aaKnown RBP15.66■□□□□ 0.1
SMG8-202ENST00000543872 NOB1Q9ULX3 412 aaKnown RBP15.65■□□□□ 0.1
SMG8-202ENST00000543872 U2AF1L5P0DN76 240 aaPredicted RBP15.65■□□□□ 0.1
SMG8-202ENST00000543872 FBLN2P98095 1184 aa15.65■□□□□ 0.1
SMG8-202ENST00000543872 U2AF1Q01081 240 aaKnown RBP eCLIP15.65■□□□□ 0.1
SMG8-202ENST00000543872 PPP4R3BQ5MIZ7 849 aa15.65■□□□□ 0.1
SMG8-202ENST00000543872 SSH1Q8WYL5 1049 aa15.65■□□□□ 0.1
SMG8-202ENST00000543872 SYCE3A1L190 88 aa15.64■□□□□ 0.1
SMG8-202ENST00000543872 CHD1LQ86WJ1 897 aa15.64■□□□□ 0.1
SMG8-202ENST00000543872 CCDC94Q9BW85 323 aaPredicted RBP15.64■□□□□ 0.1
SMG8-202ENST00000543872 RAPGEF6Q8TEU7 1601 aa15.64■□□□□ 0.09
SMG8-202ENST00000543872 LMBRD1Q9NUN5 540 aa15.64■□□□□ 0.09
SMG8-202ENST00000543872 TBC1D9Q6ZT07 1266 aa15.63■□□□□ 0.09
SMG8-202ENST00000543872 AK9Q5TCS8 1911 aa15.63■□□□□ 0.09
SMG8-202ENST00000543872 CCDC39Q9UFE4 941 aa15.63■□□□□ 0.09
SMG8-202ENST00000543872 ITSN2Q9NZM3 1697 aa15.63■□□□□ 0.09
SMG8-202ENST00000543872 NUCB1Q02818 461 aa15.63■□□□□ 0.09
SMG8-202ENST00000543872 ATF7IPQ6VMQ6 1270 aa15.63■□□□□ 0.09
SMG8-202ENST00000543872 PDLIM2Q96JY6 352 aa15.63■□□□□ 0.09
SMG8-202ENST00000543872 DISP1Q96F81 1524 aa15.63■□□□□ 0.09
SMG8-202ENST00000543872 MTHFSP49914 203 aa15.62■□□□□ 0.09
SMG8-202ENST00000543872 C1orf115Q9H7X2 142 aa15.62■□□□□ 0.09
SMG8-202ENST00000543872 TMEM51Q9NW97 253 aa15.62■□□□□ 0.09
SMG8-202ENST00000543872 TPRNQ4KMQ1 711 aa15.62■□□□□ 0.09
SMG8-202ENST00000543872 UTP14CQ5TAP6 766 aaKnown RBP15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms