RNA–Protein interactions for RNA: ENST00000543789.6

CDKN3-207, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 5 BASIC

Gene CDKN3, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-207ENST00000543789 STK26Q9P289 416 aa33.81■■■■□ 3
CDKN3-207ENST00000543789 LAMC1P11047 1609 aa33.81■■■■□ 3
CDKN3-207ENST00000543789 NPHP3Q7Z494 1330 aa33.8■■■■□ 3
CDKN3-207ENST00000543789 RGS12O14924 1447 aa33.8■■■■□ 3
CDKN3-207ENST00000543789 MPHOSPH9Q99550 1183 aa33.8■■■■□ 3
CDKN3-207ENST00000543789 FNBP4Q8N3X1 1017 aaPredicted RBP33.79■■■■□ 3
CDKN3-207ENST00000543789 WAPLQ7Z5K2 1190 aa33.78■■■■□ 3
CDKN3-207ENST00000543789 ANKRD30BQ9BXX2 1392 aa33.77■■■■□ 3
CDKN3-207ENST00000543789 TRPC5Q9UL62 973 aaPredicted RBP33.77■■■■□ 3
CDKN3-207ENST00000543789 PPLO60437 1756 aa33.76■■■■□ 3
CDKN3-207ENST00000543789 FOXO3O43524 673 aa33.76■■■□□ 2.99
CDKN3-207ENST00000543789 SPATA31E1Q6ZUB1 1445 aa33.74■■■□□ 2.99
CDKN3-207ENST00000543789 TMEM132EQ6IEE7 984 aa33.74■■■□□ 2.99
CDKN3-207ENST00000543789 LRPPRCP42704 1394 aaKnown RBP33.73■■■□□ 2.99
CDKN3-207ENST00000543789 ABCC11Q96J66 1382 aa33.72■■■□□ 2.99
CDKN3-207ENST00000543789 NUTM2FA1L443 756 aa33.71■■■□□ 2.99
CDKN3-207ENST00000543789 XPCQ01831 940 aaPredicted RBP33.71■■■□□ 2.99
CDKN3-207ENST00000543789 TECPR2O15040 1411 aa33.7■■■□□ 2.98
CDKN3-207ENST00000543789 CDC42BPGQ6DT37 1551 aa33.69■■■□□ 2.98
CDKN3-207ENST00000543789 MYOM2P54296 1465 aa33.65■■■□□ 2.98
CDKN3-207ENST00000543789 PXDNQ92626 1479 aa33.65■■■□□ 2.98
CDKN3-207ENST00000543789 PLEKHH1Q9ULM0 1364 aa33.65■■■□□ 2.98
CDKN3-207ENST00000543789 ATAD2Q6PL18 1390 aa33.64■■■□□ 2.98
CDKN3-207ENST00000543789 ATRNO75882 1429 aa33.63■■■□□ 2.97
CDKN3-207ENST00000543789 PIK3C2GO75747 1445 aa33.62■■■□□ 2.97
CDKN3-207ENST00000543789 SIRT1Q96EB6 747 aa33.62■■■□□ 2.97
CDKN3-207ENST00000543789 COL22A1Q8NFW1 1626 aaPredicted RBP33.61■■■□□ 2.97
CDKN3-207ENST00000543789 ACIN1Q9UKV3 1341 aaKnown RBP33.61■■■□□ 2.97
CDKN3-207ENST00000543789 C14orf93Q9H972 538 aaKnown RBP33.6■■■□□ 2.97
CDKN3-207ENST00000543789 YTHDC2Q9H6S0 1430 aaKnown RBP33.6■■■□□ 2.97
CDKN3-207ENST00000543789 BCL9LQ86UU0 1499 aa33.57■■■□□ 2.97
CDKN3-207ENST00000543789 SPATA31A3Q5VYP0 1347 aa33.55■■■□□ 2.96
CDKN3-207ENST00000543789 KRT28Q7Z3Y7 464 aa33.55■■■□□ 2.96
CDKN3-207ENST00000543789 GJD4Q96KN9 370 aaPredicted RBP33.55■■■□□ 2.96
CDKN3-207ENST00000543789 CFAP70Q5T0N1 1121 aa33.53■■■□□ 2.96
CDKN3-207ENST00000543789 DHX57Q6P158 1386 aaKnown RBP33.51■■■□□ 2.96
CDKN3-207ENST00000543789 UNC5CLQ8IV45 518 aa33.49■■■□□ 2.95
CDKN3-207ENST00000543789 PHF8Q9UPP1 1060 aa33.49■■■□□ 2.95
CDKN3-207ENST00000543789 IFT172Q9UG01 1749 aa33.48■■■□□ 2.95
CDKN3-207ENST00000543789 PSME1Q06323 249 aa33.48■■■□□ 2.95
CDKN3-207ENST00000543789 KNDC1Q76NI1 1749 aa33.46■■■□□ 2.95
CDKN3-207ENST00000543789 CCDC125Q86Z20 511 aa33.46■■■□□ 2.95
CDKN3-207ENST00000543789 PRAM1Q96QH2 718 aa33.45■■■□□ 2.95
CDKN3-207ENST00000543789 SAFB2Q14151 953 aaKnown RBP eCLIP33.44■■■□□ 2.94
CDKN3-207ENST00000543789 NRXN1Q9ULB1 1477 aa33.44■■■□□ 2.94
CDKN3-207ENST00000543789 HAP1P54257 671 aaPredicted RBP33.43■■■□□ 2.94
CDKN3-207ENST00000543789 POGKQ9P215 609 aa33.41■■■□□ 2.94
CDKN3-207ENST00000543789 FMN2Q9NZ56 1722 aa33.41■■■□□ 2.94
CDKN3-207ENST00000543789 SLIT2O94813 1529 aa33.4■■■□□ 2.94
CDKN3-207ENST00000543789 CABLES1Q8TDN4 633 aa33.39■■■□□ 2.94
CDKN3-207ENST00000543789 ZRANB1Q9UGI0 708 aa33.39■■■□□ 2.94
CDKN3-207ENST00000543789 KIF1AQ12756 1690 aa33.38■■■□□ 2.93
CDKN3-207ENST00000543789 TNS3Q68CZ2 1445 aa33.37■■■□□ 2.93
CDKN3-207ENST00000543789 LMOD2Q6P5Q4 547 aa33.37■■■□□ 2.93
CDKN3-207ENST00000543789 SBNO1A3KN83 1393 aa33.36■■■□□ 2.93
CDKN3-207ENST00000543789 PLEKHG5O94827 1062 aa33.36■■■□□ 2.93
CDKN3-207ENST00000543789 RALGAPBQ86X10 1494 aa33.36■■■□□ 2.93
CDKN3-207ENST00000543789 MARF1Q9Y4F3 1742 aaKnown RBP33.33■■■□□ 2.93
CDKN3-207ENST00000543789 PMFBP1Q8TBY8 1022 aa33.33■■■□□ 2.93
CDKN3-207ENST00000543789 RAB3GAP2Q9H2M9 1393 aa33.33■■■□□ 2.93
CDKN3-207ENST00000543789 VPS72Q15906 364 aa33.31■■■□□ 2.92
CDKN3-207ENST00000543789 ARHGEF10O15013 1369 aa33.31■■■□□ 2.92
CDKN3-207ENST00000543789 TRAK1Q9UPV9 953 aa33.3■■■□□ 2.92
CDKN3-207ENST00000543789 SEPT12Q8IYM1 358 aa33.29■■■□□ 2.92
CDKN3-207ENST00000543789 SRCAPQ6ZRS2 3230 aa33.28■■■□□ 2.92
CDKN3-207ENST00000543789 CCDC9Q9Y3X0 531 aaKnown RBP33.28■■■□□ 2.92
CDKN3-207ENST00000543789 USP32Q8NFA0 1604 aa33.28■■■□□ 2.92
CDKN3-207ENST00000543789 DLC1Q96QB1 1528 aa33.28■■■□□ 2.92
CDKN3-207ENST00000543789 ANKARQ7Z5J8 1434 aa33.28■■■□□ 2.92
CDKN3-207ENST00000543789 EP400Q96L91 3159 aa33.27■■■□□ 2.92
CDKN3-207ENST00000543789 KDM2AQ9Y2K7 1162 aa33.27■■■□□ 2.92
CDKN3-207ENST00000543789 GLI3P10071 1580 aa33.26■■■□□ 2.92
CDKN3-207ENST00000543789 TNKS1BP1Q9C0C2 1729 aaKnown RBP33.26■■■□□ 2.92
CDKN3-207ENST00000543789 HIRIP3Q9BW71 556 aaPredicted RBP33.26■■■□□ 2.91
CDKN3-207ENST00000543789 FAM83GA6ND36 823 aa33.25■■■□□ 2.91
CDKN3-207ENST00000543789 ONECUT3O60422 494 aaPredicted RBP33.25■■■□□ 2.91
CDKN3-207ENST00000543789 DCAF11Q8TEB1 546 aa33.24■■■□□ 2.91
CDKN3-207ENST00000543789 BLMP54132 1417 aaPredicted RBP33.23■■■□□ 2.91
CDKN3-207ENST00000543789 MINK1Q8N4C8 1332 aaPredicted RBP33.22■■■□□ 2.91
CDKN3-207ENST00000543789 STAC3Q96MF2 364 aa33.21■■■□□ 2.91
CDKN3-207ENST00000543789 RGPD8O14715 1765 aaPredicted RBP33.2■■■□□ 2.91
CDKN3-207ENST00000543789 GPRASP1Q5JY77 1395 aa33.2■■■□□ 2.9
CDKN3-207ENST00000543789 ADGRB1O14514 1584 aa33.19■■■□□ 2.9
CDKN3-207ENST00000543789 SF3B2Q13435 895 aaKnown RBP33.19■■■□□ 2.9
CDKN3-207ENST00000543789 EIF3AQ14152 1382 aaKnown RBP33.19■■■□□ 2.9
CDKN3-207ENST00000543789 WASLO00401 505 aaPredicted RBP33.18■■■□□ 2.9
CDKN3-207ENST00000543789 KRT27Q7Z3Y8 459 aa33.17■■■□□ 2.9
CDKN3-207ENST00000543789 PRR36Q9H6K5 1346 aa33.17■■■□□ 2.9
CDKN3-207ENST00000543789 DEFB132Q7Z7B7 95 aa33.15■■■□□ 2.9
CDKN3-207ENST00000543789 NGDNQ8NEJ9 315 aaKnown RBP33.14■■■□□ 2.9
CDKN3-207ENST00000543789 BTG4Q9NY30 223 aa33.14■■■□□ 2.9
CDKN3-207ENST00000543789 ADGRB2O60241 1585 aa33.13■■■□□ 2.89
CDKN3-207ENST00000543789 A0A0G2JS52 829 aa33.11■■■□□ 2.89
CDKN3-207ENST00000543789 HRCP23327 699 aa33.11■■■□□ 2.89
CDKN3-207ENST00000543789 MYT1Q01538 1121 aa33.11■■■□□ 2.89
CDKN3-207ENST00000543789 PAK3O75914 559 aaPredicted RBP33.09■■■□□ 2.89
CDKN3-207ENST00000543789 FAM98CQ17RN3 349 aaKnown RBP33.09■■■□□ 2.89
CDKN3-207ENST00000543789 NWD2Q9ULI1 1742 aa33.08■■■□□ 2.89
CDKN3-207ENST00000543789 TULP4Q9NRJ4 1543 aa33.07■■■□□ 2.88
CDKN3-207ENST00000543789 PLCH1Q4KWH8 1693 aa33.04■■■□□ 2.88
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms