RNA–Protein interactions for RNA: ENST00000543540.5

CADM1-216, Transcript of cell adhesion molecule 1, humanhuman

TSL 3

Gene CADM1, Length 629 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CADM1-216ENST00000543540 CDK12Q9NYV4 1490 aaPredicted RBP16.96■□□□□ 0.31
CADM1-216ENST00000543540 IFT172Q9UG01 1749 aa16.96■□□□□ 0.3
CADM1-216ENST00000543540 AFF2P51816 1311 aa16.96■□□□□ 0.3
CADM1-216ENST00000543540 RXRBP28702 533 aa16.95■□□□□ 0.3
CADM1-216ENST00000543540 NRXN1Q9ULB1 1477 aa16.93■□□□□ 0.3
CADM1-216ENST00000543540 SIRT1Q96EB6 747 aa16.92■□□□□ 0.3
CADM1-216ENST00000543540 YTHDC2Q9H6S0 1430 aaKnown RBP16.91■□□□□ 0.3
CADM1-216ENST00000543540 C8orf37Q96NL8 207 aa16.91■□□□□ 0.3
CADM1-216ENST00000543540 STK26Q9P289 416 aa16.91■□□□□ 0.3
CADM1-216ENST00000543540 MYOM2P54296 1465 aa16.91■□□□□ 0.3
CADM1-216ENST00000543540 NPHP3Q7Z494 1330 aa16.91■□□□□ 0.3
CADM1-216ENST00000543540 KNDC1Q76NI1 1749 aa16.9■□□□□ 0.3
CADM1-216ENST00000543540 ESCO1Q5FWF5 840 aa16.9■□□□□ 0.3
CADM1-216ENST00000543540 TMEM132EQ6IEE7 984 aa16.9■□□□□ 0.3
CADM1-216ENST00000543540 WAPLQ7Z5K2 1190 aa16.9■□□□□ 0.3
CADM1-216ENST00000543540 C14orf93Q9H972 538 aaKnown RBP16.9■□□□□ 0.3
CADM1-216ENST00000543540 RAB3GAP2Q9H2M9 1393 aa16.89■□□□□ 0.3
CADM1-216ENST00000543540 PXDNQ92626 1479 aa16.89■□□□□ 0.29
CADM1-216ENST00000543540 PLEKHH1Q9ULM0 1364 aa16.89■□□□□ 0.29
CADM1-216ENST00000543540 COL22A1Q8NFW1 1626 aaPredicted RBP16.88■□□□□ 0.29
CADM1-216ENST00000543540 ADAMTS2O95450 1211 aa16.87■□□□□ 0.29
CADM1-216ENST00000543540 RBM6P78332 1123 aaKnown RBP16.87■□□□□ 0.29
CADM1-216ENST00000543540 UPF1Q92900 1129 aaKnown RBP eCLIP16.87■□□□□ 0.29
CADM1-216ENST00000543540 QTRT2Q9H974 415 aaKnown RBP16.87■□□□□ 0.29
CADM1-216ENST00000543540 FNBP4Q8N3X1 1017 aaPredicted RBP16.86■□□□□ 0.29
CADM1-216ENST00000543540 NGLY1Q96IV0 654 aa16.86■□□□□ 0.29
CADM1-216ENST00000543540 FOXO3O43524 673 aa16.85■□□□□ 0.29
CADM1-216ENST00000543540 DHX57Q6P158 1386 aaKnown RBP16.85■□□□□ 0.29
CADM1-216ENST00000543540 RGS12O14924 1447 aa16.84■□□□□ 0.29
CADM1-216ENST00000543540 HRCP23327 699 aa16.83■□□□□ 0.28
CADM1-216ENST00000543540 CFAP70Q5T0N1 1121 aa16.83■□□□□ 0.28
CADM1-216ENST00000543540 FMN2Q9NZ56 1722 aa16.82■□□□□ 0.28
CADM1-216ENST00000543540 DLC1Q96QB1 1528 aa16.81■□□□□ 0.28
CADM1-216ENST00000543540 NUTM2FA1L443 756 aa16.81■□□□□ 0.28
CADM1-216ENST00000543540 USP21Q9UK80 565 aa16.81■□□□□ 0.28
CADM1-216ENST00000543540 TRPC5Q9UL62 973 aaPredicted RBP16.81■□□□□ 0.28
CADM1-216ENST00000543540 KIF1AQ12756 1690 aa16.81■□□□□ 0.28
CADM1-216ENST00000543540 ATRNO75882 1429 aa16.8■□□□□ 0.28
CADM1-216ENST00000543540 XPCQ01831 940 aaPredicted RBP16.8■□□□□ 0.28
CADM1-216ENST00000543540 SPATA31A3Q5VYP0 1347 aa16.79■□□□□ 0.28
CADM1-216ENST00000543540 STAC3Q96MF2 364 aa16.79■□□□□ 0.28
CADM1-216ENST00000543540 ADGRB1O14514 1584 aa16.79■□□□□ 0.28
CADM1-216ENST00000543540 PRAM1Q96QH2 718 aa16.78■□□□□ 0.28
CADM1-216ENST00000543540 BCL9LQ86UU0 1499 aa16.78■□□□□ 0.28
CADM1-216ENST00000543540 ANKARQ7Z5J8 1434 aa16.77■□□□□ 0.27
CADM1-216ENST00000543540 KRT28Q7Z3Y7 464 aa16.76■□□□□ 0.27
CADM1-216ENST00000543540 PHF8Q9UPP1 1060 aa16.76■□□□□ 0.27
CADM1-216ENST00000543540 ADGRB2O60241 1585 aa16.76■□□□□ 0.27
CADM1-216ENST00000543540 SBNO1A3KN83 1393 aa16.75■□□□□ 0.27
CADM1-216ENST00000543540 TNS3Q68CZ2 1445 aa16.74■□□□□ 0.27
CADM1-216ENST00000543540 PSME1Q06323 249 aa16.74■□□□□ 0.27
CADM1-216ENST00000543540 POGKQ9P215 609 aa16.74■□□□□ 0.27
CADM1-216ENST00000543540 DCAF11Q8TEB1 546 aa16.73■□□□□ 0.27
CADM1-216ENST00000543540 ATAD2Q6PL18 1390 aa16.73■□□□□ 0.27
CADM1-216ENST00000543540 SLIT2O94813 1529 aa16.72■□□□□ 0.27
CADM1-216ENST00000543540 SAFB2Q14151 953 aaKnown RBP eCLIP16.72■□□□□ 0.27
CADM1-216ENST00000543540 MARF1Q9Y4F3 1742 aaKnown RBP16.72■□□□□ 0.27
CADM1-216ENST00000543540 ARHGEF10O15013 1369 aa16.71■□□□□ 0.27
CADM1-216ENST00000543540 EIF3AQ14152 1382 aaKnown RBP16.71■□□□□ 0.27
CADM1-216ENST00000543540 UNC5CLQ8IV45 518 aa16.7■□□□□ 0.26
CADM1-216ENST00000543540 GJD4Q96KN9 370 aaPredicted RBP16.7■□□□□ 0.26
CADM1-216ENST00000543540 TRAK1Q9UPV9 953 aa16.7■□□□□ 0.26
CADM1-216ENST00000543540 USP32Q8NFA0 1604 aa16.7■□□□□ 0.26
CADM1-216ENST00000543540 KDM2AQ9Y2K7 1162 aa16.69■□□□□ 0.26
CADM1-216ENST00000543540 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.69■□□□□ 0.26
CADM1-216ENST00000543540 TULP4Q9NRJ4 1543 aa16.67■□□□□ 0.26
CADM1-216ENST00000543540 RALGAPBQ86X10 1494 aa16.67■□□□□ 0.26
CADM1-216ENST00000543540 WASLO00401 505 aaPredicted RBP16.66■□□□□ 0.26
CADM1-216ENST00000543540 HIRIP3Q9BW71 556 aaPredicted RBP16.66■□□□□ 0.26
CADM1-216ENST00000543540 RGPD8O14715 1765 aaPredicted RBP16.66■□□□□ 0.26
CADM1-216ENST00000543540 PRR36Q9H6K5 1346 aa16.66■□□□□ 0.26
CADM1-216ENST00000543540 PMFBP1Q8TBY8 1022 aa16.65■□□□□ 0.26
CADM1-216ENST00000543540 EP400Q96L91 3159 aa16.65■□□□□ 0.26
CADM1-216ENST00000543540 MINK1Q8N4C8 1332 aaPredicted RBP16.65■□□□□ 0.26
CADM1-216ENST00000543540 HAP1P54257 671 aaPredicted RBP16.64■□□□□ 0.25
CADM1-216ENST00000543540 CABLES1Q8TDN4 633 aa16.64■□□□□ 0.25
CADM1-216ENST00000543540 GLI3P10071 1580 aa16.64■□□□□ 0.25
CADM1-216ENST00000543540 GPRASP1Q5JY77 1395 aa16.64■□□□□ 0.25
CADM1-216ENST00000543540 VPS72Q15906 364 aa16.63■□□□□ 0.25
CADM1-216ENST00000543540 CCDC125Q86Z20 511 aa16.63■□□□□ 0.25
CADM1-216ENST00000543540 ABCA3Q99758 1704 aa16.62■□□□□ 0.25
CADM1-216ENST00000543540 TRPM3Q9HCF6 1732 aaPredicted RBP16.62■□□□□ 0.25
CADM1-216ENST00000543540 LMOD2Q6P5Q4 547 aa16.61■□□□□ 0.25
CADM1-216ENST00000543540 NWD2Q9ULI1 1742 aa16.6■□□□□ 0.25
CADM1-216ENST00000543540 FAM83GA6ND36 823 aa16.6■□□□□ 0.25
CADM1-216ENST00000543540 ONECUT3O60422 494 aaPredicted RBP16.6■□□□□ 0.25
CADM1-216ENST00000543540 ATP7BP35670 1465 aa16.6■□□□□ 0.25
CADM1-216ENST00000543540 ARHGEF28Q8N1W1 1705 aaKnown RBP16.59■□□□□ 0.25
CADM1-216ENST00000543540 ALS2Q96Q42 1657 aa16.59■□□□□ 0.25
CADM1-216ENST00000543540 PLCH1Q4KWH8 1693 aa16.58■□□□□ 0.24
CADM1-216ENST00000543540 KIAA1210Q9ULL0 1709 aa16.58■□□□□ 0.24
CADM1-216ENST00000543540 NGDNQ8NEJ9 315 aaKnown RBP16.57■□□□□ 0.24
CADM1-216ENST00000543540 NUDT16Q96DE0 195 aaKnown RBP16.57■□□□□ 0.24
CADM1-216ENST00000543540 SEPT12Q8IYM1 358 aa16.56■□□□□ 0.24
CADM1-216ENST00000543540 BLMP54132 1417 aaPredicted RBP16.55■□□□□ 0.24
CADM1-216ENST00000543540 PLEKHG5O94827 1062 aa16.55■□□□□ 0.24
CADM1-216ENST00000543540 SRCAPQ6ZRS2 3230 aa16.55■□□□□ 0.24
CADM1-216ENST00000543540 POLR3AO14802 1390 aaPredicted RBP16.54■□□□□ 0.24
CADM1-216ENST00000543540 CDK19Q9BWU1 502 aa16.54■□□□□ 0.24
CADM1-216ENST00000543540 ITSN1Q15811 1721 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms