RNA–Protein interactions for RNA: ENST00000543428.5

PSME3-204, Transcript of proteasome activator subunit 3, humanhuman

TSL 2

Gene PSME3, Length 956 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSME3-204ENST00000543428 ORAI2Q96SN7 254 aa31.48■■■□□ 2.63
PSME3-204ENST00000543428 C14orf93Q9H972 538 aaKnown RBP31.48■■■□□ 2.63
PSME3-204ENST00000543428 LRP6O75581 1613 aa31.48■■■□□ 2.63
PSME3-204ENST00000543428 YTHDC2Q9H6S0 1430 aaKnown RBP31.47■■■□□ 2.63
PSME3-204ENST00000543428 KNDC1Q76NI1 1749 aa31.46■■■□□ 2.63
PSME3-204ENST00000543428 CFAP70Q5T0N1 1121 aa31.46■■■□□ 2.63
PSME3-204ENST00000543428 CDC42BPGQ6DT37 1551 aa31.46■■■□□ 2.63
PSME3-204ENST00000543428 NRXN1Q9ULB1 1477 aa31.46■■■□□ 2.63
PSME3-204ENST00000543428 LAMC1P11047 1609 aa31.45■■■□□ 2.62
PSME3-204ENST00000543428 DHX57Q6P158 1386 aaKnown RBP31.43■■■□□ 2.62
PSME3-204ENST00000543428 ESCO1Q5FWF5 840 aa31.41■■■□□ 2.62
PSME3-204ENST00000543428 PLEKHH1Q9ULM0 1364 aa31.41■■■□□ 2.62
PSME3-204ENST00000543428 KDM2AQ9Y2K7 1162 aa31.4■■■□□ 2.62
PSME3-204ENST00000543428 NUTM2FA1L443 756 aa31.38■■■□□ 2.61
PSME3-204ENST00000543428 DCAF11Q8TEB1 546 aa31.38■■■□□ 2.61
PSME3-204ENST00000543428 ZNF772Q68DY9 489 aaPredicted RBP31.37■■■□□ 2.61
PSME3-204ENST00000543428 SIRT1Q96EB6 747 aa31.37■■■□□ 2.61
PSME3-204ENST00000543428 PNPLA6Q8IY17 1366 aa31.37■■■□□ 2.61
PSME3-204ENST00000543428 SOS2Q07890 1332 aaPredicted RBP31.35■■■□□ 2.61
PSME3-204ENST00000543428 NPHP3Q7Z494 1330 aa31.33■■■□□ 2.61
PSME3-204ENST00000543428 STAC3Q96MF2 364 aa31.32■■■□□ 2.6
PSME3-204ENST00000543428 PRAM1Q96QH2 718 aa31.31■■■□□ 2.6
PSME3-204ENST00000543428 SAFB2Q14151 953 aaKnown RBP eCLIP31.3■■■□□ 2.6
PSME3-204ENST00000543428 POGKQ9P215 609 aa31.3■■■□□ 2.6
PSME3-204ENST00000543428 FMN2Q9NZ56 1722 aa31.29■■■□□ 2.6
PSME3-204ENST00000543428 FOXO3O43524 673 aa31.28■■■□□ 2.6
PSME3-204ENST00000543428 AFF2P51816 1311 aa31.26■■■□□ 2.6
PSME3-204ENST00000543428 C8orf37Q96NL8 207 aa31.26■■■□□ 2.59
PSME3-204ENST00000543428 XPCQ01831 940 aaPredicted RBP31.25■■■□□ 2.59
PSME3-204ENST00000543428 DLC1Q96QB1 1528 aa31.24■■■□□ 2.59
PSME3-204ENST00000543428 ADAMTS2O95450 1211 aa31.24■■■□□ 2.59
PSME3-204ENST00000543428 TRAK1Q9UPV9 953 aa31.24■■■□□ 2.59
PSME3-204ENST00000543428 ADGRB1O14514 1584 aa31.23■■■□□ 2.59
PSME3-204ENST00000543428 PXDNQ92626 1479 aa31.22■■■□□ 2.59
PSME3-204ENST00000543428 KIF1AQ12756 1690 aa31.2■■■□□ 2.59
PSME3-204ENST00000543428 NGLY1Q96IV0 654 aa31.2■■■□□ 2.59
PSME3-204ENST00000543428 RXRBP28702 533 aa31.19■■■□□ 2.58
PSME3-204ENST00000543428 RGPD8O14715 1765 aaPredicted RBP31.17■■■□□ 2.58
PSME3-204ENST00000543428 COL22A1Q8NFW1 1626 aaPredicted RBP31.16■■■□□ 2.58
PSME3-204ENST00000543428 PHF8Q9UPP1 1060 aa31.16■■■□□ 2.58
PSME3-204ENST00000543428 KRT28Q7Z3Y7 464 aa31.13■■■□□ 2.57
PSME3-204ENST00000543428 HIRIP3Q9BW71 556 aaPredicted RBP31.13■■■□□ 2.57
PSME3-204ENST00000543428 MINK1Q8N4C8 1332 aaPredicted RBP31.13■■■□□ 2.57
PSME3-204ENST00000543428 ADGRB2O60241 1585 aa31.11■■■□□ 2.57
PSME3-204ENST00000543428 QTRT2Q9H974 415 aaKnown RBP31.11■■■□□ 2.57
PSME3-204ENST00000543428 PSME1Q06323 249 aa31.1■■■□□ 2.57
PSME3-204ENST00000543428 ANKARQ7Z5J8 1434 aa31.09■■■□□ 2.57
PSME3-204ENST00000543428 SPATA31A3Q5VYP0 1347 aa31.08■■■□□ 2.57
PSME3-204ENST00000543428 EIF3AQ14152 1382 aaKnown RBP31.07■■■□□ 2.56
PSME3-204ENST00000543428 USP21Q9UK80 565 aa31.06■■■□□ 2.56
PSME3-204ENST00000543428 RBM6P78332 1123 aaKnown RBP31.05■■■□□ 2.56
PSME3-204ENST00000543428 PMFBP1Q8TBY8 1022 aa31.05■■■□□ 2.56
PSME3-204ENST00000543428 CDK12Q9NYV4 1490 aaPredicted RBP31.04■■■□□ 2.56
PSME3-204ENST00000543428 USP32Q8NFA0 1604 aa31.03■■■□□ 2.56
PSME3-204ENST00000543428 WASLO00401 505 aaPredicted RBP31.03■■■□□ 2.56
PSME3-204ENST00000543428 ARHGEF28Q8N1W1 1705 aaKnown RBP31.03■■■□□ 2.56
PSME3-204ENST00000543428 KIAA1210Q9ULL0 1709 aa31.02■■■□□ 2.56
PSME3-204ENST00000543428 LMOD2Q6P5Q4 547 aa31.02■■■□□ 2.56
PSME3-204ENST00000543428 TNS3Q68CZ2 1445 aa31.01■■■□□ 2.55
PSME3-204ENST00000543428 HAP1P54257 671 aaPredicted RBP31.01■■■□□ 2.55
PSME3-204ENST00000543428 FNBP4Q8N3X1 1017 aaPredicted RBP31.01■■■□□ 2.55
PSME3-204ENST00000543428 MARF1Q9Y4F3 1742 aaKnown RBP31.01■■■□□ 2.55
PSME3-204ENST00000543428 TULP4Q9NRJ4 1543 aa31■■■□□ 2.55
PSME3-204ENST00000543428 TRPC5Q9UL62 973 aaPredicted RBP31■■■□□ 2.55
PSME3-204ENST00000543428 SBNO1A3KN83 1393 aa30.98■■■□□ 2.55
PSME3-204ENST00000543428 PLEKHG5O94827 1062 aa30.97■■■□□ 2.55
PSME3-204ENST00000543428 PRR36Q9H6K5 1346 aa30.96■■■□□ 2.55
PSME3-204ENST00000543428 ARHGEF10O15013 1369 aa30.95■■■□□ 2.55
PSME3-204ENST00000543428 GPRASP1Q5JY77 1395 aa30.95■■■□□ 2.55
PSME3-204ENST00000543428 NBPF1Q3BBV0 1214 aa30.95■■■□□ 2.55
PSME3-204ENST00000543428 RGS12O14924 1447 aa30.94■■■□□ 2.54
PSME3-204ENST00000543428 NEUROD1Q13562 356 aa30.93■■■□□ 2.54
PSME3-204ENST00000543428 NGDNQ8NEJ9 315 aaKnown RBP30.93■■■□□ 2.54
PSME3-204ENST00000543428 L3MBTL2Q969R5 705 aa30.93■■■□□ 2.54
PSME3-204ENST00000543428 SIN3AQ96ST3 1273 aa30.93■■■□□ 2.54
PSME3-204ENST00000543428 ATRNO75882 1429 aa30.91■■■□□ 2.54
PSME3-204ENST00000543428 CABLES1Q8TDN4 633 aa30.91■■■□□ 2.54
PSME3-204ENST00000543428 UPF1Q92900 1129 aaKnown RBP eCLIP30.89■■■□□ 2.54
PSME3-204ENST00000543428 NUDT16Q96DE0 195 aaKnown RBP30.89■■■□□ 2.54
PSME3-204ENST00000543428 CDK19Q9BWU1 502 aa30.89■■■□□ 2.54
PSME3-204ENST00000543428 BCL9LQ86UU0 1499 aa30.89■■■□□ 2.53
PSME3-204ENST00000543428 ITSN1Q15811 1721 aa30.88■■■□□ 2.53
PSME3-204ENST00000543428 TRPM3Q9HCF6 1732 aaPredicted RBP30.85■■■□□ 2.53
PSME3-204ENST00000543428 ATP7BP35670 1465 aa30.85■■■□□ 2.53
PSME3-204ENST00000543428 PAK3O75914 559 aaPredicted RBP30.85■■■□□ 2.53
PSME3-204ENST00000543428 UNC5CLQ8IV45 518 aa30.84■■■□□ 2.53
PSME3-204ENST00000543428 CENPJQ9HC77 1338 aaPredicted RBP30.83■■■□□ 2.53
PSME3-204ENST00000543428 ABCA3Q99758 1704 aa30.82■■■□□ 2.52
PSME3-204ENST00000543428 SLIT2O94813 1529 aa30.82■■■□□ 2.52
PSME3-204ENST00000543428 GJD4Q96KN9 370 aaPredicted RBP30.81■■■□□ 2.52
PSME3-204ENST00000543428 TNKS1BP1Q9C0C2 1729 aaKnown RBP30.81■■■□□ 2.52
PSME3-204ENST00000543428 ALS2Q96Q42 1657 aa30.79■■■□□ 2.52
PSME3-204ENST00000543428 CCDC61Q9Y6R9 512 aa30.78■■■□□ 2.52
PSME3-204ENST00000543428 SRPK2P78362 688 aaKnown RBP30.77■■■□□ 2.52
PSME3-204ENST00000543428 TRPM1Q7Z4N2 1603 aa30.75■■■□□ 2.51
PSME3-204ENST00000543428 ATAD2Q6PL18 1390 aa30.75■■■□□ 2.51
PSME3-204ENST00000543428 PLCH1Q4KWH8 1693 aa30.74■■■□□ 2.51
PSME3-204ENST00000543428 QRICH2Q9H0J4 1663 aa30.74■■■□□ 2.51
PSME3-204ENST00000543428 TOPAZ1Q8N9V7 1692 aa30.74■■■□□ 2.51
PSME3-204ENST00000543428 ACEP12821 1306 aa30.73■■■□□ 2.51
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms