RNA–Protein interactions for RNA: ENST00000543324.1

CIT-213, Transcript of citron rho-interacting serine/threonine kinase, human

TSL 3

Gene CIT, Length 497 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIT-213	ENST00000543324	BCAN	Q96GW7	911 aa		10.31	□□□□□ -0.76
CIT-213	ENST00000543324	STAG3	Q9UJ98	1225 aa		10.31	□□□□□ -0.76
CIT-213	ENST00000543324	TRPM2	O94759	1503 aa		10.31	□□□□□ -0.76
CIT-213	ENST00000543324	TMEM131L	A2VDJ0	1609 aa		10.3	□□□□□ -0.76
CIT-213	ENST00000543324	FHDC1	Q9C0D6	1143 aa	Predicted RBP	10.3	□□□□□ -0.76
CIT-213	ENST00000543324	WWC3	Q9ULE0	1092 aa		10.3	□□□□□ -0.76
CIT-213	ENST00000543324	ARHGAP31	Q2M1Z3	1444 aa		10.3	□□□□□ -0.76
CIT-213	ENST00000543324	TNS2	Q63HR2	1409 aa		10.3	□□□□□ -0.76
CIT-213	ENST00000543324	APLP1	P51693	650 aa		10.29	□□□□□ -0.76
CIT-213	ENST00000543324	VPS72	Q15906	364 aa		10.29	□□□□□ -0.76
CIT-213	ENST00000543324	TBX22	Q9Y458	520 aa		10.29	□□□□□ -0.76
CIT-213	ENST00000543324	VPS8	Q8N3P4	1428 aa		10.29	□□□□□ -0.76
CIT-213	ENST00000543324	AATK	Q6ZMQ8	1374 aa		10.28	□□□□□ -0.76
CIT-213	ENST00000543324	PIK3R4	Q99570	1358 aa		10.28	□□□□□ -0.76
CIT-213	ENST00000543324	ARHGEF5	Q12774	1597 aa		10.28	□□□□□ -0.76
CIT-213	ENST00000543324	PTGER2	P43116	358 aa		10.28	□□□□□ -0.76
CIT-213	ENST00000543324	RPRD2	Q5VT52	1461 aa	Known RBP	10.28	□□□□□ -0.76
CIT-213	ENST00000543324	MTUS2	Q5JR59	1369 aa		10.27	□□□□□ -0.76
CIT-213	ENST00000543324	ZFYVE9	O95405	1425 aa		10.27	□□□□□ -0.77
CIT-213	ENST00000543324	CFDP1	Q9UEE9	299 aa	Predicted RBP	10.27	□□□□□ -0.77
CIT-213	ENST00000543324	PTPN23	Q9H3S7	1636 aa		10.26	□□□□□ -0.77
CIT-213	ENST00000543324	FAM182B	Q5T319	152 aa		10.26	□□□□□ -0.77
CIT-213	ENST00000543324	JMY	Q8N9B5	988 aa		10.26	□□□□□ -0.77
CIT-213	ENST00000543324	NWD2	Q9ULI1	1742 aa		10.26	□□□□□ -0.77
CIT-213	ENST00000543324	CCNB3	Q8WWL7	1395 aa		10.26	□□□□□ -0.77
CIT-213	ENST00000543324	EIF2AK4	Q9P2K8	1649 aa	Known RBP	10.25	□□□□□ -0.77
CIT-213	ENST00000543324	ADAMTS13	Q76LX8	1427 aa		10.25	□□□□□ -0.77
CIT-213	ENST00000543324	ATP10D	Q9P241	1426 aa		10.25	□□□□□ -0.77
CIT-213	ENST00000543324	CROCC2	H7BZ55	1655 aa		10.25	□□□□□ -0.77
CIT-213	ENST00000543324	IDI1	Q13907	227 aa		10.25	□□□□□ -0.77
CIT-213	ENST00000543324	PLCH1	Q4KWH8	1693 aa		10.25	□□□□□ -0.77
CIT-213	ENST00000543324	NOS1	P29475	1434 aa		10.24	□□□□□ -0.77
CIT-213	ENST00000543324	C1orf167	Q5SNV9	1468 aa		10.24	□□□□□ -0.77
CIT-213	ENST00000543324	USP32	Q8NFA0	1604 aa		10.24	□□□□□ -0.77
CIT-213	ENST00000543324		A0A0G2JS52	829 aa		10.23	□□□□□ -0.77
CIT-213	ENST00000543324	APBA3	O96018	575 aa		10.23	□□□□□ -0.77
CIT-213	ENST00000543324	MYT1	Q01538	1121 aa		10.23	□□□□□ -0.77
CIT-213	ENST00000543324	XRN1	Q8IZH2	1706 aa	Known RBP	10.23	□□□□□ -0.77
CIT-213	ENST00000543324	MAP3K5	Q99683	1374 aa		10.23	□□□□□ -0.77
CIT-213	ENST00000543324	PTPRU	Q92729	1446 aa		10.23	□□□□□ -0.77
CIT-213	ENST00000543324	ADGRL3	Q9HAR2	1447 aa		10.23	□□□□□ -0.77
CIT-213	ENST00000543324	CCDC141	Q6ZP82	1450 aa		10.23	□□□□□ -0.77
CIT-213	ENST00000543324	NALCN	Q8IZF0	1738 aa		10.22	□□□□□ -0.77
CIT-213	ENST00000543324	WDR90	Q96KV7	1748 aa		10.22	□□□□□ -0.77
CIT-213	ENST00000543324	TRIM37	O94972	964 aa		10.22	□□□□□ -0.77
CIT-213	ENST00000543324	GPR162	Q16538	588 aa		10.22	□□□□□ -0.77
CIT-213	ENST00000543324	FAM161A	Q3B820	660 aa		10.22	□□□□□ -0.77
CIT-213	ENST00000543324	GPBP1L1	Q9HC44	474 aa	Predicted RBP	10.22	□□□□□ -0.77
CIT-213	ENST00000543324	ZNF644	Q9H582	1327 aa	Predicted RBP	10.22	□□□□□ -0.77
CIT-213	ENST00000543324	CCDC9	Q9Y3X0	531 aa	Known RBP	10.21	□□□□□ -0.77
CIT-213	ENST00000543324	NEXMIF	Q5QGS0	1516 aa		10.21	□□□□□ -0.78
CIT-213	ENST00000543324	THSD7A	Q9UPZ6	1657 aa		10.21	□□□□□ -0.78
CIT-213	ENST00000543324	ZBTB7A	O95365	584 aa		10.2	□□□□□ -0.78
CIT-213	ENST00000543324	FAM98C	Q17RN3	349 aa	Known RBP	10.2	□□□□□ -0.78
CIT-213	ENST00000543324	KLRG1	Q96E93	195 aa		10.2	□□□□□ -0.78
CIT-213	ENST00000543324	AMOTL2	Q9Y2J4	779 aa		10.2	□□□□□ -0.78
CIT-213	ENST00000543324	PXDN	Q92626	1479 aa		10.19	□□□□□ -0.78
CIT-213	ENST00000543324	PDGFD	Q9GZP0	370 aa	Predicted RBP	10.19	□□□□□ -0.78
CIT-213	ENST00000543324	MYO5B	Q9ULV0	1848 aa		10.19	□□□□□ -0.78
CIT-213	ENST00000543324	ABCC5	O15440	1437 aa		10.18	□□□□□ -0.78
CIT-213	ENST00000543324	ORAI2	Q96SN7	254 aa		10.18	□□□□□ -0.78
CIT-213	ENST00000543324	RIMS2	Q9UQ26	1411 aa		10.17	□□□□□ -0.78
CIT-213	ENST00000543324	NRAP	Q86VF7	1730 aa		10.17	□□□□□ -0.78
CIT-213	ENST00000543324	LOC105371045	A0A1W2PR82	267 aa		10.17	□□□□□ -0.78
CIT-213	ENST00000543324	SGIP1	Q9BQI5	828 aa		10.17	□□□□□ -0.78
CIT-213	ENST00000543324	ADGRL2	O95490	1459 aa		10.17	□□□□□ -0.78
CIT-213	ENST00000543324	MYOM3	Q5VTT5	1437 aa		10.16	□□□□□ -0.78
CIT-213	ENST00000543324	KIAA1210	Q9ULL0	1709 aa		10.16	□□□□□ -0.78
CIT-213	ENST00000543324	ATF5	Q9Y2D1	282 aa	Predicted RBP	10.16	□□□□□ -0.78
CIT-213	ENST00000543324	ADCY9	O60503	1353 aa		10.15	□□□□□ -0.78
CIT-213	ENST00000543324	FAM196A	Q6ZSG2	479 aa		10.15	□□□□□ -0.78
CIT-213	ENST00000543324	ANO8	Q9HCE9	1232 aa	Predicted RBP	10.15	□□□□□ -0.78
CIT-213	ENST00000543324	RGPD3	A6NKT7	1758 aa	Predicted RBP	10.15	□□□□□ -0.78
CIT-213	ENST00000543324	RGPD4	Q7Z3J3	1758 aa		10.15	□□□□□ -0.78
CIT-213	ENST00000543324	KIF3C	O14782	793 aa		10.13	□□□□□ -0.79
CIT-213	ENST00000543324	GCC2	Q8IWJ2	1684 aa		10.12	□□□□□ -0.79
CIT-213	ENST00000543324	NPHP3	Q7Z494	1330 aa		10.12	□□□□□ -0.79
CIT-213	ENST00000543324	HDGF	P51858	240 aa	Known RBP	10.12	□□□□□ -0.79
CIT-213	ENST00000543324	KANK4	Q5T7N3	995 aa	Predicted RBP	10.12	□□□□□ -0.79
CIT-213	ENST00000543324	RSPH4A	Q5TD94	716 aa		10.11	□□□□□ -0.79
CIT-213	ENST00000543324	ZNF526	Q8TF50	670 aa	Predicted RBP	10.11	□□□□□ -0.79
CIT-213	ENST00000543324	ARX	Q96QS3	562 aa		10.11	□□□□□ -0.79
CIT-213	ENST00000543324	MTFR1L	Q9H019	292 aa		10.1	□□□□□ -0.79
CIT-213	ENST00000543324	DUOX2	Q9NRD8	1548 aa		10.1	□□□□□ -0.79
CIT-213	ENST00000543324	HSPA1A	P0DMV8	641 aa	Known RBP	10.09	□□□□□ -0.79
CIT-213	ENST00000543324	HSPA1B	P0DMV9	641 aa	Known RBP	10.09	□□□□□ -0.79
CIT-213	ENST00000543324	PELP1	Q8IZL8	1130 aa	Known RBP	10.09	□□□□□ -0.79
CIT-213	ENST00000543324	SLC52A1	Q9NWF4	448 aa		10.09	□□□□□ -0.79
CIT-213	ENST00000543324	ABCA3	Q99758	1704 aa		10.09	□□□□□ -0.79
CIT-213	ENST00000543324	HTRA3	P83110	453 aa		10.08	□□□□□ -0.8
CIT-213	ENST00000543324	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	10.08	□□□□□ -0.8
CIT-213	ENST00000543324	GRIN3B	O60391	1043 aa		10.07	□□□□□ -0.8
CIT-213	ENST00000543324	MLLT1	Q03111	559 aa	Predicted RBP	10.07	□□□□□ -0.8
CIT-213	ENST00000543324	NRXN3	Q9Y4C0	1643 aa		10.07	□□□□□ -0.8
CIT-213	ENST00000543324	LMTK2	Q8IWU2	1503 aa		10.07	□□□□□ -0.8
CIT-213	ENST00000543324	XPC	Q01831	940 aa	Predicted RBP	10.06	□□□□□ -0.8
CIT-213	ENST00000543324	DAPK1	P53355	1430 aa		10.06	□□□□□ -0.8
CIT-213	ENST00000543324	ERBIN	Q96RT1	1412 aa		10.06	□□□□□ -0.8
CIT-213	ENST00000543324	SPATA31A5	Q5VU36	1347 aa		10.06	□□□□□ -0.8
CIT-213	ENST00000543324	SPATA31A7	Q8IWB4	1347 aa		10.06	□□□□□ -0.8

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