RNA–Protein interactions for RNA: ENST00000543184.5

PRAME-214, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PRAME, Length 2,758 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-214ENST00000543184 FER1L4A9Z1Z3 1794 aa18.5■□□□□ 0.55
PRAME-214ENST00000543184 KNSTRNQ9Y448 316 aa18.49■□□□□ 0.55
PRAME-214ENST00000543184 HSPA2P54652 639 aa18.49■□□□□ 0.55
PRAME-214ENST00000543184 DMRT2Q9Y5R5 561 aa18.49■□□□□ 0.55
PRAME-214ENST00000543184 FAM161AQ3B820 660 aa18.48■□□□□ 0.55
PRAME-214ENST00000543184 SLC52A1Q9NWF4 448 aa18.48■□□□□ 0.55
PRAME-214ENST00000543184 CENPQQ7L2Z9 268 aaPredicted RBP18.48■□□□□ 0.55
PRAME-214ENST00000543184 ARHGAP31Q2M1Z3 1444 aa18.48■□□□□ 0.55
PRAME-214ENST00000543184 GOLGA2Q08379 1002 aa18.47■□□□□ 0.55
PRAME-214ENST00000543184 CFAP70Q5T0N1 1121 aa18.47■□□□□ 0.55
PRAME-214ENST00000543184 TMEM132EQ6IEE7 984 aa18.47■□□□□ 0.55
PRAME-214ENST00000543184 APAF1O14727 1248 aa18.47■□□□□ 0.55
PRAME-214ENST00000543184 PREX1Q8TCU6 1659 aa18.46■□□□□ 0.55
PRAME-214ENST00000543184 IGHDP01880 384 aa18.45■□□□□ 0.54
PRAME-214ENST00000543184 SEC24BO95487 1268 aa18.44■□□□□ 0.54
PRAME-214ENST00000543184 PTPRMP28827 1452 aa18.43■□□□□ 0.54
PRAME-214ENST00000543184 ZC3H13Q5T200 1668 aaKnown RBP18.43■□□□□ 0.54
PRAME-214ENST00000543184 C3P01024 1663 aa18.43■□□□□ 0.54
PRAME-214ENST00000543184 ARXQ96QS3 562 aa18.42■□□□□ 0.54
PRAME-214ENST00000543184 LTKP29376 864 aa18.42■□□□□ 0.54
PRAME-214ENST00000543184 NEUROD2Q15784 382 aa18.42■□□□□ 0.54
PRAME-214ENST00000543184 AMER1Q5JTC6 1135 aaPredicted RBP18.42■□□□□ 0.54
PRAME-214ENST00000543184 STK26Q9P289 416 aa18.42■□□□□ 0.54
PRAME-214ENST00000543184 MROH2AA6NES4 1674 aa18.42■□□□□ 0.54
PRAME-214ENST00000543184 SLFN5Q08AF3 891 aa18.42■□□□□ 0.54
PRAME-214ENST00000543184 EIF5BO60841 1220 aaKnown RBP18.41■□□□□ 0.54
PRAME-214ENST00000543184 SAFB2Q14151 953 aaKnown RBP eCLIP18.41■□□□□ 0.54
PRAME-214ENST00000543184 SLC26A8Q96RN1 970 aa18.41■□□□□ 0.54
PRAME-214ENST00000543184 GPRASP1Q5JY77 1395 aa18.41■□□□□ 0.54
PRAME-214ENST00000543184 PANK1Q8TE04 598 aa18.4■□□□□ 0.54
PRAME-214ENST00000543184 SLKQ9H2G2 1235 aaPredicted RBP18.4■□□□□ 0.54
PRAME-214ENST00000543184 ZNF521Q96K83 1311 aa18.39■□□□□ 0.53
PRAME-214ENST00000543184 TXNDC2Q86VQ3 553 aa18.39■□□□□ 0.53
PRAME-214ENST00000543184 TNNT2P45379 298 aaPredicted RBP18.38■□□□□ 0.53
PRAME-214ENST00000543184 COG6Q9Y2V7 657 aa18.38■□□□□ 0.53
PRAME-214ENST00000543184 ADAMTSL3P82987 1691 aa18.38■□□□□ 0.53
PRAME-214ENST00000543184 PIK3C2BO00750 1634 aa18.38■□□□□ 0.53
PRAME-214ENST00000543184 SPATA31D1Q6ZQQ2 1576 aa18.38■□□□□ 0.53
PRAME-214ENST00000543184 MYO5BQ9ULV0 1848 aa18.37■□□□□ 0.53
PRAME-214ENST00000543184 TNNQ9UQP3 1299 aa18.37■□□□□ 0.53
PRAME-214ENST00000543184 RRP7AQ9Y3A4 280 aaKnown RBP18.37■□□□□ 0.53
PRAME-214ENST00000543184 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.36■□□□□ 0.53
PRAME-214ENST00000543184 A2ML1A8K2U0 1454 aa18.36■□□□□ 0.53
PRAME-214ENST00000543184 TRAK1Q9UPV9 953 aa18.36■□□□□ 0.53
PRAME-214ENST00000543184 SPRYD3Q8NCJ5 442 aa18.36■□□□□ 0.53
PRAME-214ENST00000543184 RBM33Q96EV2 1170 aaKnown RBP18.35■□□□□ 0.53
PRAME-214ENST00000543184 POGKQ9P215 609 aa18.35■□□□□ 0.53
PRAME-214ENST00000543184 BCL2L13Q9BXK5 485 aa18.35■□□□□ 0.53
PRAME-214ENST00000543184 VGFO15240 615 aaPredicted RBP18.34■□□□□ 0.53
PRAME-214ENST00000543184 CANXP27824 592 aaKnown RBP18.34■□□□□ 0.53
PRAME-214ENST00000543184 ADGRB3O60242 1522 aa18.33■□□□□ 0.53
PRAME-214ENST00000543184 KIF1BO60333 1816 aa18.33■□□□□ 0.53
PRAME-214ENST00000543184 USP19O94966 1318 aa18.33■□□□□ 0.52
PRAME-214ENST00000543184 RIMS2Q9UQ26 1411 aa18.33■□□□□ 0.52
PRAME-214ENST00000543184 NCKAP5LQ9HCH0 1330 aa18.32■□□□□ 0.52
PRAME-214ENST00000543184 THEMISQ8N1K5 641 aaPredicted RBP18.31■□□□□ 0.52
PRAME-214ENST00000543184 TMEM131LA2VDJ0 1609 aa18.31■□□□□ 0.52
PRAME-214ENST00000543184 TMEM2Q9UHN6 1383 aa18.3■□□□□ 0.52
PRAME-214ENST00000543184 CLUAP1Q96AJ1 413 aa18.3■□□□□ 0.52
PRAME-214ENST00000543184 EID1Q9Y6B2 187 aa18.29■□□□□ 0.52
PRAME-214ENST00000543184 TRMT2AQ8IZ69 625 aaKnown RBP18.28■□□□□ 0.52
PRAME-214ENST00000543184 CARD14Q9BXL6 1004 aa18.27■□□□□ 0.52
PRAME-214ENST00000543184 NEXMIFQ5QGS0 1516 aa18.27■□□□□ 0.51
PRAME-214ENST00000543184 NKTRP30414 1462 aaKnown RBP18.25■□□□□ 0.51
PRAME-214ENST00000543184 RLBP1P12271 317 aa18.25■□□□□ 0.51
PRAME-214ENST00000543184 INSRP06213 1382 aa18.24■□□□□ 0.51
PRAME-214ENST00000543184 MYO3AQ8NEV4 1616 aa18.24■□□□□ 0.51
PRAME-214ENST00000543184 NLRP1Q9C000 1473 aa18.24■□□□□ 0.51
PRAME-214ENST00000543184 WAPLQ7Z5K2 1190 aa18.24■□□□□ 0.51
PRAME-214ENST00000543184 C14orf93Q9H972 538 aaKnown RBP18.24■□□□□ 0.51
PRAME-214ENST00000543184 RPGRIP1LQ68CZ1 1315 aa18.23■□□□□ 0.51
PRAME-214ENST00000543184 CENPJQ9HC77 1338 aaPredicted RBP18.23■□□□□ 0.51
PRAME-214ENST00000543184 E9PSI1 815 aa18.23■□□□□ 0.51
PRAME-214ENST00000543184 PCDHB15Q9Y5E8 787 aa18.23■□□□□ 0.51
PRAME-214ENST00000543184 ANKLE2Q86XL3 938 aa18.23■□□□□ 0.51
PRAME-214ENST00000543184 CEP170BQ9Y4F5 1589 aaPredicted RBP18.23■□□□□ 0.51
PRAME-214ENST00000543184 WWC1Q8IX03 1113 aa18.22■□□□□ 0.51
PRAME-214ENST00000543184 METP08581 1390 aa18.22■□□□□ 0.51
PRAME-214ENST00000543184 PIK3C2GO75747 1445 aa18.22■□□□□ 0.51
PRAME-214ENST00000543184 ASXL1Q8IXJ9 1541 aa18.22■□□□□ 0.51
PRAME-214ENST00000543184 ZFYVE9O95405 1425 aa18.22■□□□□ 0.51
PRAME-214ENST00000543184 NUTM2FA1L443 756 aa18.21■□□□□ 0.51
PRAME-214ENST00000543184 GZF1Q9H116 711 aaPredicted RBP18.21■□□□□ 0.51
PRAME-214ENST00000543184 UBR1Q8IWV7 1749 aa18.21■□□□□ 0.51
PRAME-214ENST00000543184 EIF3AQ14152 1382 aaKnown RBP18.21■□□□□ 0.51
PRAME-214ENST00000543184 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.19■□□□□ 0.5
PRAME-214ENST00000543184 LAMC1P11047 1609 aa18.19■□□□□ 0.5
PRAME-214ENST00000543184 HDGFP51858 240 aaKnown RBP18.18■□□□□ 0.5
PRAME-214ENST00000543184 CDCA8Q53HL2 280 aa18.18■□□□□ 0.5
PRAME-214ENST00000543184 PPLO60437 1756 aa18.18■□□□□ 0.5
PRAME-214ENST00000543184 SETD1BQ9UPS6 1966 aaKnown RBP18.18■□□□□ 0.5
PRAME-214ENST00000543184 PRAM1Q96QH2 718 aa18.18■□□□□ 0.5
PRAME-214ENST00000543184 PDZRN3Q9UPQ7 1066 aa18.18■□□□□ 0.5
PRAME-214ENST00000543184 MINK1Q8N4C8 1332 aaPredicted RBP18.18■□□□□ 0.5
PRAME-214ENST00000543184 MYOM2P54296 1465 aa18.16■□□□□ 0.5
PRAME-214ENST00000543184 SCAF11Q99590 1463 aaKnown RBP18.16■□□□□ 0.5
PRAME-214ENST00000543184 CGNL1Q0VF96 1302 aa18.16■□□□□ 0.5
PRAME-214ENST00000543184 TBC1D2Q9BYX2 928 aa18.15■□□□□ 0.5
PRAME-214ENST00000543184 RRAGDQ9NQL2 400 aaPredicted RBP18.15■□□□□ 0.5
PRAME-214ENST00000543184 RARSP54136 660 aaKnown RBP18.14■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 103.4 ms