RNA–Protein interactions for RNA: ENST00000543082.5

TCF4-208, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 2,399 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-208ENST00000543082 PTMSP20962 102 aa12.3□□□□□ -0.44
TCF4-208ENST00000543082 SPRYD3Q8NCJ5 442 aa12.3□□□□□ -0.44
TCF4-208ENST00000543082 HSCBQ8IWL3 235 aa12.29□□□□□ -0.44
TCF4-208ENST00000543082 C22orf23Q9BZE7 217 aa12.29□□□□□ -0.44
TCF4-208ENST00000543082 RWDD1Q9H446 243 aaPredicted RBP12.29□□□□□ -0.44
TCF4-208ENST00000543082 CEP152O94986 1710 aa12.29□□□□□ -0.44
TCF4-208ENST00000543082 SPHKAPQ2M3C7 1700 aa12.28□□□□□ -0.44
TCF4-208ENST00000543082 HNRNPMP52272 730 aaKnown RBP eCLIP12.27□□□□□ -0.447e-6■■■□□ 17
TCF4-208ENST00000543082 SKOR2Q2VWA4 1001 aaPredicted RBP12.27□□□□□ -0.44
TCF4-208ENST00000543082 ZNF692Q9BU19 519 aaPredicted RBP12.27□□□□□ -0.44
TCF4-208ENST00000543082 PCDHB15Q9Y5E8 787 aa12.27□□□□□ -0.44
TCF4-208ENST00000543082 DUOX2Q9NRD8 1548 aa12.27□□□□□ -0.45
TCF4-208ENST00000543082 SCAF11Q99590 1463 aaKnown RBP12.26□□□□□ -0.45
TCF4-208ENST00000543082 CIZ1Q9ULV3 898 aaPredicted RBP12.26□□□□□ -0.45
TCF4-208ENST00000543082 CALD1Q05682 793 aaKnown RBP12.26□□□□□ -0.45
TCF4-208ENST00000543082 GBP4Q96PP9 640 aa12.26□□□□□ -0.45
TCF4-208ENST00000543082 TTC37Q6PGP7 1564 aa12.26□□□□□ -0.45
TCF4-208ENST00000543082 SHPRHQ149N8 1683 aa12.25□□□□□ -0.45
TCF4-208ENST00000543082 DDIT3P35638 169 aa12.25□□□□□ -0.45
TCF4-208ENST00000543082 RARSP54136 660 aaKnown RBP12.25□□□□□ -0.45
TCF4-208ENST00000543082 CCDC173Q0VFZ6 552 aa12.25□□□□□ -0.45
TCF4-208ENST00000543082 WWC1Q8IX03 1113 aa12.25□□□□□ -0.45
TCF4-208ENST00000543082 MFAP1P55081 439 aaKnown RBP12.25□□□□□ -0.45
TCF4-208ENST00000543082 CNKSR2Q8WXI2 1034 aa12.25□□□□□ -0.45
TCF4-208ENST00000543082 RNF216Q9NWF9 866 aaPredicted RBP12.25□□□□□ -0.45
TCF4-208ENST00000543082 TERF1P54274 439 aa12.24□□□□□ -0.45
TCF4-208ENST00000543082 KIAA1211Q6ZU35 1233 aa12.24□□□□□ -0.45
TCF4-208ENST00000543082 KIAA1210Q9ULL0 1709 aa12.24□□□□□ -0.45
TCF4-208ENST00000543082 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.23□□□□□ -0.45
TCF4-208ENST00000543082 SNX21Q969T3 373 aa12.23□□□□□ -0.45
TCF4-208ENST00000543082 IQSEC2Q5JU85 1478 aa12.23□□□□□ -0.45
TCF4-208ENST00000543082 POLR3AO14802 1390 aaPredicted RBP12.23□□□□□ -0.45
TCF4-208ENST00000543082 RLBP1P12271 317 aa12.22□□□□□ -0.45
TCF4-208ENST00000543082 ZSCAN30Q86W11 494 aa12.22□□□□□ -0.45
TCF4-208ENST00000543082 STAC3Q96MF2 364 aa12.22□□□□□ -0.45
TCF4-208ENST00000543082 PPP1R9BQ96SB3 815 aa12.22□□□□□ -0.45
TCF4-208ENST00000543082 MAP7D2Q96T17 732 aa12.22□□□□□ -0.45
TCF4-208ENST00000543082 SYCP2Q9BX26 1530 aa12.22□□□□□ -0.45
TCF4-208ENST00000543082 SMC5Q8IY18 1101 aa12.22□□□□□ -0.45
TCF4-208ENST00000543082 JPH4Q96JJ6 628 aa12.22□□□□□ -0.45
TCF4-208ENST00000543082 OFD1O75665 1012 aa12.21□□□□□ -0.45
TCF4-208ENST00000543082 GAS2L3Q86XJ1 694 aa12.21□□□□□ -0.45
TCF4-208ENST00000543082 ANP32BQ92688 251 aaKnown RBP12.21□□□□□ -0.45
TCF4-208ENST00000543082 TNPO1Q92973 898 aaKnown RBP12.21□□□□□ -0.45
TCF4-208ENST00000543082 IBTKQ9P2D0 1353 aaPredicted RBP12.21□□□□□ -0.46
TCF4-208ENST00000543082 MVPQ14764 893 aaKnown RBP12.2□□□□□ -0.46
TCF4-208ENST00000543082 RAB3GAP1Q15042 981 aa12.2□□□□□ -0.46
TCF4-208ENST00000543082 RBM25P49756 843 aaKnown RBP12.2□□□□□ -0.46
TCF4-208ENST00000543082 KANK1Q14678 1352 aa12.2□□□□□ -0.46
TCF4-208ENST00000543082 WDR63Q8IWG1 891 aa12.19□□□□□ -0.46
TCF4-208ENST00000543082 DNAJC5BQ9UF47 199 aa12.19□□□□□ -0.46
TCF4-208ENST00000543082 MSNP26038 577 aaKnown RBP12.19□□□□□ -0.46
TCF4-208ENST00000543082 CHMP7Q8WUX9 453 aaPredicted RBP12.19□□□□□ -0.46
TCF4-208ENST00000543082 SLC24A1O60721 1099 aa12.18□□□□□ -0.46
TCF4-208ENST00000543082 HSP90AB1P08238 724 aaKnown RBP12.18□□□□□ -0.46
TCF4-208ENST00000543082 NASPP49321 788 aaPredicted RBP12.18□□□□□ -0.46
TCF4-208ENST00000543082 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.18□□□□□ -0.46
TCF4-208ENST00000543082 TNNQ9UQP3 1299 aa12.18□□□□□ -0.46
TCF4-208ENST00000543082 HDAC1Q13547 482 aaPredicted RBP12.18□□□□□ -0.46
TCF4-208ENST00000543082 RUNDC1Q96C34 613 aa12.18□□□□□ -0.46
TCF4-208ENST00000543082 GOLGA6L22H0YM25 854 aa12.17□□□□□ -0.46
TCF4-208ENST00000543082 TRPM2O94759 1503 aa12.17□□□□□ -0.46
TCF4-208ENST00000543082 HS1BP3Q53T59 392 aa12.16□□□□□ -0.46
TCF4-208ENST00000543082 ZKSCAN2Q63HK3 967 aa12.16□□□□□ -0.46
TCF4-208ENST00000543082 FTSJ3Q8IY81 847 aaKnown RBP12.16□□□□□ -0.46
TCF4-208ENST00000543082 NEURL4Q96JN8 1562 aa12.16□□□□□ -0.46
TCF4-208ENST00000543082 CFAP74Q9C0B2 1584 aa12.16□□□□□ -0.46
TCF4-208ENST00000543082 ARHGAP5Q13017 1502 aa12.15□□□□□ -0.46
TCF4-208ENST00000543082 CCDC27Q2M243 656 aa12.15□□□□□ -0.46
TCF4-208ENST00000543082 DZIP1LQ8IYY4 767 aaKnown RBP12.15□□□□□ -0.46
TCF4-208ENST00000543082 ERVK-7P63135 1459 aa12.15□□□□□ -0.46
TCF4-208ENST00000543082 ARHGAP31Q2M1Z3 1444 aa12.15□□□□□ -0.46
TCF4-208ENST00000543082 ERCC6Q03468 1493 aa12.15□□□□□ -0.46
TCF4-208ENST00000543082 RIPK4P57078 832 aa12.15□□□□□ -0.46
TCF4-208ENST00000543082 MTERF4Q7Z6M4 381 aaKnown RBP12.15□□□□□ -0.46
TCF4-208ENST00000543082 NCBP3Q53F19 620 aaKnown RBP12.14□□□□□ -0.47
TCF4-208ENST00000543082 BCL2L13Q9BXK5 485 aa12.14□□□□□ -0.47
TCF4-208ENST00000543082 PRDM4Q9UKN5 801 aa12.14□□□□□ -0.47
TCF4-208ENST00000543082 MYO3AQ8NEV4 1616 aa12.14□□□□□ -0.47
TCF4-208ENST00000543082 CT47B1P0C2W7 299 aaPredicted RBP12.14□□□□□ -0.47
TCF4-208ENST00000543082 KLHL40Q2TBA0 621 aa12.14□□□□□ -0.47
TCF4-208ENST00000543082 CLEC17AQ6ZS10 378 aa12.14□□□□□ -0.47
TCF4-208ENST00000543082 PODXL2Q9NZ53 605 aa12.14□□□□□ -0.47
TCF4-208ENST00000543082 TCP11L2Q8N4U5 519 aa12.13□□□□□ -0.47
TCF4-208ENST00000543082 CLTCL1P53675 1640 aa12.13□□□□□ -0.47
TCF4-208ENST00000543082 USP32Q8NFA0 1604 aa12.13□□□□□ -0.47
TCF4-208ENST00000543082 ADGRL1O94910 1474 aa12.13□□□□□ -0.47
TCF4-208ENST00000543082 ADGRB2O60241 1585 aa12.13□□□□□ -0.47
TCF4-208ENST00000543082 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.13□□□□□ -0.47
TCF4-208ENST00000543082 DDX19BQ9UMR2 479 aa12.13□□□□□ -0.47
TCF4-208ENST00000543082 NEUROD2Q15784 382 aa12.12□□□□□ -0.47
TCF4-208ENST00000543082 PTPRTO14522 1441 aa12.12□□□□□ -0.47
TCF4-208ENST00000543082 ZNF500O60304 480 aaPredicted RBP12.12□□□□□ -0.47
TCF4-208ENST00000543082 RRP7AQ9Y3A4 280 aaKnown RBP12.12□□□□□ -0.47
TCF4-208ENST00000543082 K7ELQ4 463 aaPredicted RBP12.11□□□□□ -0.47
TCF4-208ENST00000543082 RBM10P98175 930 aaKnown RBP12.11□□□□□ -0.47
TCF4-208ENST00000543082 SMAP1Q8IYB5 467 aaPredicted RBP12.11□□□□□ -0.47
TCF4-208ENST00000543082 CARD14Q9BXL6 1004 aa12.11□□□□□ -0.47
TCF4-208ENST00000543082 ZNF445P59923 1031 aa12.11□□□□□ -0.47
TCF4-208ENST00000543082 R3HCC1Q9Y3T6 440 aaKnown RBP12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms