RNA–Protein interactions for RNA: ENST00000543058.1

MRPL48-211, Transcript of mitochondrial ribosomal protein L48, humanhuman

TSL 3

Gene MRPL48, Length 699 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL48-211ENST00000543058 PRDM9Q9NQV7 894 aa7.48□□□□□ -1.21
MRPL48-211ENST00000543058 FAM217BQ9NTX9 383 aaPredicted RBP7.48□□□□□ -1.21
MRPL48-211ENST00000543058 HOXA2O43364 376 aa7.47□□□□□ -1.21
MRPL48-211ENST00000543058 DXOO77932 396 aaKnown RBP7.46□□□□□ -1.22
MRPL48-211ENST00000543058 BARGINQ6ZT62 677 aa7.46□□□□□ -1.22
MRPL48-211ENST00000543058 TOR4AQ9NXH8 423 aa7.46□□□□□ -1.22
MRPL48-211ENST00000543058 ZMYND10O75800 440 aa7.45□□□□□ -1.22
MRPL48-211ENST00000543058 CD2BP2O95400 341 aaKnown RBP7.45□□□□□ -1.22
MRPL48-211ENST00000543058 PKDCCQ504Y2 493 aa7.45□□□□□ -1.22
MRPL48-211ENST00000543058 CRIPAKQ8N1N5 446 aa7.45□□□□□ -1.22
MRPL48-211ENST00000543058 USB1Q9BQ65 265 aaKnown RBP7.45□□□□□ -1.22
MRPL48-211ENST00000543058 TNFRSF10AO00220 468 aa7.44□□□□□ -1.22
MRPL48-211ENST00000543058 AMHR2Q16671 573 aa7.44□□□□□ -1.22
MRPL48-211ENST00000543058 AVPP01185 164 aa7.43□□□□□ -1.22
MRPL48-211ENST00000543058 REPIN1Q9BWE0 567 aaKnown RBP7.43□□□□□ -1.22
MRPL48-211ENST00000543058 HLA-CQ95604 372 aa7.42□□□□□ -1.22
MRPL48-211ENST00000543058 FAM187AA6NFU0 413 aa7.41□□□□□ -1.22
MRPL48-211ENST00000543058 ZNF787Q6DD87 383 aa7.41□□□□□ -1.22
MRPL48-211ENST00000543058 WNT7AO00755 349 aa7.4□□□□□ -1.22
MRPL48-211ENST00000543058 TRIM32Q13049 653 aa7.4□□□□□ -1.22
MRPL48-211ENST00000543058 ZC3H15Q8WU90 426 aaKnown RBP7.4□□□□□ -1.22
MRPL48-211ENST00000543058 SMCPP49901 116 aaPredicted RBP7.39□□□□□ -1.23
MRPL48-211ENST00000543058 AAASQ9NRG9 546 aa7.39□□□□□ -1.23
MRPL48-211ENST00000543058 ZBTB24O43167 697 aaPredicted RBP7.38□□□□□ -1.23
MRPL48-211ENST00000543058 JUNDP17535 347 aa7.38□□□□□ -1.23
MRPL48-211ENST00000543058 FOXC1Q12948 553 aa7.38□□□□□ -1.23
MRPL48-211ENST00000543058 RETREG3Q86VR2 466 aa7.38□□□□□ -1.23
MRPL48-211ENST00000543058 SSTR3P32745 418 aaPredicted RBP7.37□□□□□ -1.23
MRPL48-211ENST00000543058 GUCA2AQ02747 115 aa7.37□□□□□ -1.23
MRPL48-211ENST00000543058 CTC1Q2NKJ3 1217 aa7.37□□□□□ -1.23
MRPL48-211ENST00000543058 PCDHGC3Q9UN70 934 aa7.37□□□□□ -1.23
MRPL48-211ENST00000543058 GJA5P36382 358 aa7.36□□□□□ -1.23
MRPL48-211ENST00000543058 WNT7BP56706 349 aa7.36□□□□□ -1.23
MRPL48-211ENST00000543058 NUTM1Q86Y26 1132 aa7.36□□□□□ -1.23
MRPL48-211ENST00000543058 CYP4X1Q8N118 509 aa7.36□□□□□ -1.23
MRPL48-211ENST00000543058 SPIRE2Q8WWL2 714 aa7.36□□□□□ -1.23
MRPL48-211ENST00000543058 SNIP1Q8TAD8 396 aaKnown RBP7.35□□□□□ -1.23
MRPL48-211ENST00000543058 POTECB2RU33 542 aa7.34□□□□□ -1.23
MRPL48-211ENST00000543058 ST8SIA5O15466 376 aa7.34□□□□□ -1.23
MRPL48-211ENST00000543058 FDX1P10109 184 aa7.34□□□□□ -1.23
MRPL48-211ENST00000543058 GIGYF2Q6Y7W6 1299 aaKnown RBP7.34□□□□□ -1.23
MRPL48-211ENST00000543058 KRI1Q8N9T8 703 aaKnown RBP7.34□□□□□ -1.23
MRPL48-211ENST00000543058 ZNF775Q96BV0 537 aaPredicted RBP7.34□□□□□ -1.23
MRPL48-211ENST00000543058 SMPD1P17405 629 aa7.33□□□□□ -1.24
MRPL48-211ENST00000543058 SKOR1P84550 965 aa7.33□□□□□ -1.24
MRPL48-211ENST00000543058 DESI1Q6ICB0 168 aa7.33□□□□□ -1.24
MRPL48-211ENST00000543058 SYMPKQ92797 1274 aaKnown RBP7.33□□□□□ -1.24
MRPL48-211ENST00000543058 MRGPRX2Q96LB1 330 aa7.33□□□□□ -1.24
MRPL48-211ENST00000543058 PARP9Q8IXQ6 854 aa7.32□□□□□ -1.24
MRPL48-211ENST00000543058 MOXD2PA6NHM9 499 aa7.31□□□□□ -1.24
MRPL48-211ENST00000543058 SPDYE5A6NIY4 337 aa7.31□□□□□ -1.24
MRPL48-211ENST00000543058 TRIM66O15016 1216 aa7.31□□□□□ -1.24
MRPL48-211ENST00000543058 TTLL12Q14166 644 aaPredicted RBP7.31□□□□□ -1.24
MRPL48-211ENST00000543058 PTPRNQ16849 979 aa7.31□□□□□ -1.24
MRPL48-211ENST00000543058 NUDT12Q9BQG2 462 aa7.31□□□□□ -1.24
MRPL48-211ENST00000543058 TTC24A2A3L6 582 aaPredicted RBP7.3□□□□□ -1.24
MRPL48-211ENST00000543058 DIXDC1Q155Q3 683 aa7.3□□□□□ -1.24
MRPL48-211ENST00000543058 LCE2AQ5TA79 106 aaPredicted RBP7.3□□□□□ -1.24
MRPL48-211ENST00000543058 AXIN1O15169 862 aa7.29□□□□□ -1.24
MRPL48-211ENST00000543058 RC3H1Q5TC82 1133 aaKnown RBP7.29□□□□□ -1.24
MRPL48-211ENST00000543058 PTCRAQ6ISU1 281 aaPredicted RBP7.29□□□□□ -1.24
MRPL48-211ENST00000543058 BEGAINQ9BUH8 593 aa7.29□□□□□ -1.24
MRPL48-211ENST00000543058 DACH1Q9UI36 760 aa7.29□□□□□ -1.24
MRPL48-211ENST00000543058 SIAH2O43255 324 aa7.28□□□□□ -1.24
MRPL48-211ENST00000543058 CCNYL3P0C7X3 344 aa7.28□□□□□ -1.24
MRPL48-211ENST00000543058 MS4A1P11836 297 aa7.28□□□□□ -1.24
MRPL48-211ENST00000543058 NDUFV2P19404 249 aa7.28□□□□□ -1.24
MRPL48-211ENST00000543058 MTMR2Q13614 643 aa7.28□□□□□ -1.24
MRPL48-211ENST00000543058 RSBN1LQ6PCB5 846 aaPredicted RBP7.28□□□□□ -1.24
MRPL48-211ENST00000543058 CCDC24Q8N4L8 307 aa7.28□□□□□ -1.24
MRPL48-211ENST00000543058 AK7Q96M32 723 aa7.28□□□□□ -1.24
MRPL48-211ENST00000543058 EVA1BQ9NVM1 165 aa7.28□□□□□ -1.24
MRPL48-211ENST00000543058 C6orf229H3BNL8 230 aa7.27□□□□□ -1.25
MRPL48-211ENST00000543058 J3QL48 77 aa7.27□□□□□ -1.25
MRPL48-211ENST00000543058 SPTLC1O15269 473 aa7.27□□□□□ -1.25
MRPL48-211ENST00000543058 TBC1D2Q9BYX2 928 aa7.27□□□□□ -1.25
MRPL48-211ENST00000543058 TUSC1Q2TAM9 212 aa7.26□□□□□ -1.25
MRPL48-211ENST00000543058 PRR7Q8TB68 274 aa7.26□□□□□ -1.25
MRPL48-211ENST00000543058 PRPF38BQ5VTL8 546 aaKnown RBP7.25□□□□□ -1.25
MRPL48-211ENST00000543058 MPNDQ8N594 471 aa7.25□□□□□ -1.25
MRPL48-211ENST00000543058 GMPR2Q9P2T1 348 aaKnown RBP7.25□□□□□ -1.25
MRPL48-211ENST00000543058 SH3BP2P78314 561 aa7.24□□□□□ -1.25
MRPL48-211ENST00000543058 KCNH2Q12809 1159 aa7.24□□□□□ -1.25
MRPL48-211ENST00000543058 UNC93B1Q9H1C4 597 aa7.24□□□□□ -1.25
MRPL48-211ENST00000543058 ATP13A2Q9NQ11 1180 aa7.24□□□□□ -1.25
MRPL48-211ENST00000543058 LYPD8Q6UX82 237 aa7.23□□□□□ -1.25
MRPL48-211ENST00000543058 HPS1Q92902 700 aa7.23□□□□□ -1.25
MRPL48-211ENST00000543058 TMEM132AQ24JP5 1023 aa7.22□□□□□ -1.25
MRPL48-211ENST00000543058 TREML4Q6UXN2 200 aa7.22□□□□□ -1.25
MRPL48-211ENST00000543058 PCDHB15Q9Y5E8 787 aa7.22□□□□□ -1.25
MRPL48-211ENST00000543058 CFAP99D6REC4 459 aa7.21□□□□□ -1.26
MRPL48-211ENST00000543058 F12P00748 615 aaPredicted RBP7.21□□□□□ -1.26
MRPL48-211ENST00000543058 HRCP23327 699 aa7.21□□□□□ -1.26
MRPL48-211ENST00000543058 PDE4DQ08499 809 aa7.21□□□□□ -1.26
MRPL48-211ENST00000543058 TRIM47Q96LD4 638 aa7.21□□□□□ -1.26
MRPL48-211ENST00000543058 ZBTB3Q9H5J0 574 aa7.21□□□□□ -1.26
MRPL48-211ENST00000543058 C11orf95C9JLR9 678 aaPredicted RBP7.2□□□□□ -1.26
MRPL48-211ENST00000543058 RIC3Q7Z5B4 369 aa7.2□□□□□ -1.26
MRPL48-211ENST00000543058 ZNF511Q8NB15 262 aa7.2□□□□□ -1.26
MRPL48-211ENST00000543058 EHBP1Q8NDI1 1231 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms