RNA–Protein interactions for RNA: ENST00000543005.5

GTF2H3-210, Transcript of general transcription factor IIH subunit 3, humanhuman

TSL 3

Gene GTF2H3, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2H3-210ENST00000543005 TRIM32Q13049 653 aa9.3□□□□□ -0.92
GTF2H3-210ENST00000543005 MMP16P51512 607 aa9.29□□□□□ -0.92
GTF2H3-210ENST00000543005 MRGPRX2Q96LB1 330 aa9.29□□□□□ -0.92
GTF2H3-210ENST00000543005 J3QL48 77 aa9.28□□□□□ -0.92
GTF2H3-210ENST00000543005 DDX11L8A8MPP1 907 aa9.27□□□□□ -0.93
GTF2H3-210ENST00000543005 RNF19BQ6ZMZ0 732 aa9.27□□□□□ -0.93
GTF2H3-210ENST00000543005 SULF1Q8IWU6 871 aa9.27□□□□□ -0.93
GTF2H3-210ENST00000543005 REPIN1Q9BWE0 567 aaKnown RBP9.27□□□□□ -0.93
GTF2H3-210ENST00000543005 LOC100996750A0A140TA64 210 aa9.26□□□□□ -0.93
GTF2H3-210ENST00000543005 KRTAP4-6Q9BYQ5 205 aa9.26□□□□□ -0.93
GTF2H3-210ENST00000543005 FAM181BA6NEQ2 426 aa9.25□□□□□ -0.93
GTF2H3-210ENST00000543005 GNPATO15228 680 aa9.25□□□□□ -0.93
GTF2H3-210ENST00000543005 HPS1Q92902 700 aa9.25□□□□□ -0.93
GTF2H3-210ENST00000543005 SEMA3EO15041 775 aa9.24□□□□□ -0.93
GTF2H3-210ENST00000543005 FECHP22830 423 aa9.24□□□□□ -0.93
GTF2H3-210ENST00000543005 LORP23490 312 aaPredicted RBP9.24□□□□□ -0.93
GTF2H3-210ENST00000543005 GRIPAP1Q4V328 841 aa9.24□□□□□ -0.93
GTF2H3-210ENST00000543005 Q3C1V9 767 aa9.23□□□□□ -0.93
GTF2H3-210ENST00000543005 AMER1Q5JTC6 1135 aaPredicted RBP9.23□□□□□ -0.93
GTF2H3-210ENST00000543005 NPAS3Q8IXF0 933 aa9.23□□□□□ -0.93
GTF2H3-210ENST00000543005 GPR37O15354 613 aa9.22□□□□□ -0.93
GTF2H3-210ENST00000543005 P3H3Q8IVL6 736 aa9.22□□□□□ -0.93
GTF2H3-210ENST00000543005 SLC16A10Q8TF71 515 aa9.22□□□□□ -0.93
GTF2H3-210ENST00000543005 DXOO77932 396 aaKnown RBP9.21□□□□□ -0.94
GTF2H3-210ENST00000543005 TSHZ2Q9NRE2 1034 aa9.21□□□□□ -0.94
GTF2H3-210ENST00000543005 NXF1Q9UBU9 619 aaKnown RBP9.21□□□□□ -0.94
GTF2H3-210ENST00000543005 WNT7BP56706 349 aa9.2□□□□□ -0.94
GTF2H3-210ENST00000543005 PHOX2BQ99453 314 aa9.2□□□□□ -0.94
GTF2H3-210ENST00000543005 RTN4Q9NQC3 1192 aaKnown RBP9.2□□□□□ -0.94
GTF2H3-210ENST00000543005 RC3H1Q5TC82 1133 aaKnown RBP9.19□□□□□ -0.94
GTF2H3-210ENST00000543005 SKOR1P84550 965 aa9.18□□□□□ -0.94
GTF2H3-210ENST00000543005 ZSCAN1Q8NBB4 408 aa9.18□□□□□ -0.94
GTF2H3-210ENST00000543005 NLRP7Q8WX94 980 aa9.18□□□□□ -0.94
GTF2H3-210ENST00000543005 USB1Q9BQ65 265 aaKnown RBP9.18□□□□□ -0.94
GTF2H3-210ENST00000543005 GMPRP36959 345 aa9.17□□□□□ -0.94
GTF2H3-210ENST00000543005 RBM26Q5T8P6 1007 aaKnown RBP9.17□□□□□ -0.94
GTF2H3-210ENST00000543005 TESPA1A2RU30 521 aaPredicted RBP9.16□□□□□ -0.94
GTF2H3-210ENST00000543005 IRF7Q92985 503 aa9.16□□□□□ -0.94
GTF2H3-210ENST00000543005 H3BM21 787 aa9.13□□□□□ -0.95
GTF2H3-210ENST00000543005 SIAH2O43255 324 aa9.13□□□□□ -0.95
GTF2H3-210ENST00000543005 CD46P15529 392 aa9.13□□□□□ -0.95
GTF2H3-210ENST00000543005 SMYD5Q6GMV2 418 aa9.13□□□□□ -0.95
GTF2H3-210ENST00000543005 TRIM46Q7Z4K8 759 aa9.12□□□□□ -0.95
GTF2H3-210ENST00000543005 ALDH1A1P00352 501 aa9.11□□□□□ -0.95
GTF2H3-210ENST00000543005 KDM4AO75164 1064 aa9.09□□□□□ -0.95
GTF2H3-210ENST00000543005 USP46P62068 366 aa9.09□□□□□ -0.95
GTF2H3-210ENST00000543005 CCDC24Q8N4L8 307 aa9.09□□□□□ -0.95
GTF2H3-210ENST00000543005 CAPN5O15484 640 aaPredicted RBP9.08□□□□□ -0.96
GTF2H3-210ENST00000543005 ERBB4Q15303 1308 aa9.07□□□□□ -0.96
GTF2H3-210ENST00000543005 BMP1P13497 986 aa9.07□□□□□ -0.96
GTF2H3-210ENST00000543005 JUNDP17535 347 aa9.06□□□□□ -0.96
GTF2H3-210ENST00000543005 HOXA2O43364 376 aa9.03□□□□□ -0.96
GTF2H3-210ENST00000543005 VSIG8P0DPA2 414 aa9.03□□□□□ -0.96
GTF2H3-210ENST00000543005 VEGFBP49765 207 aa9.03□□□□□ -0.96
GTF2H3-210ENST00000543005 EHBP1Q8NDI1 1231 aa9.03□□□□□ -0.96
GTF2H3-210ENST00000543005 HLA-CQ95604 372 aa9.03□□□□□ -0.96
GTF2H3-210ENST00000543005 WASF2Q9Y6W5 498 aa9.03□□□□□ -0.96
GTF2H3-210ENST00000543005 PTCRAQ6ISU1 281 aaPredicted RBP9.02□□□□□ -0.97
GTF2H3-210ENST00000543005 SUZ12Q15022 739 aaKnown RBP9.01□□□□□ -0.97
GTF2H3-210ENST00000543005 ZFP42Q96MM3 310 aa9.01□□□□□ -0.97
GTF2H3-210ENST00000543005 NUDT12Q9BQG2 462 aa9.01□□□□□ -0.97
GTF2H3-210ENST00000543005 SH3BP2P78314 561 aa8.99□□□□□ -0.97
GTF2H3-210ENST00000543005 RETREG3Q86VR2 466 aa8.99□□□□□ -0.97
GTF2H3-210ENST00000543005 MPNDQ8N594 471 aa8.99□□□□□ -0.97
GTF2H3-210ENST00000543005 GPIHBP1Q8IV16 184 aa8.98□□□□□ -0.97
GTF2H3-210ENST00000543005 KCNMA1Q12791 1236 aa8.97□□□□□ -0.97
GTF2H3-210ENST00000543005 GSK3AP49840 483 aa8.96□□□□□ -0.98
GTF2H3-210ENST00000543005 MAP2K5Q13163 448 aa8.96□□□□□ -0.98
GTF2H3-210ENST00000543005 GUCA2AQ02747 115 aa8.95□□□□□ -0.98
GTF2H3-210ENST00000543005 MRPL14Q6P1L8 145 aaKnown RBP8.95□□□□□ -0.98
GTF2H3-210ENST00000543005 SYMPKQ92797 1274 aaKnown RBP8.95□□□□□ -0.98
GTF2H3-210ENST00000543005 PLEKHG3A1L390 1219 aa8.93□□□□□ -0.98
GTF2H3-210ENST00000543005 CCNYL3P0C7X3 344 aa8.93□□□□□ -0.98
GTF2H3-210ENST00000543005 IRF6O14896 467 aa8.92□□□□□ -0.98
GTF2H3-210ENST00000543005 VARSP26640 1264 aaKnown RBP8.92□□□□□ -0.98
GTF2H3-210ENST00000543005 MDM2Q00987 491 aaPredicted RBP8.92□□□□□ -0.98
GTF2H3-210ENST00000543005 SCARF1Q14162 830 aa8.92□□□□□ -0.98
GTF2H3-210ENST00000543005 KLF16Q9BXK1 252 aaPredicted RBP8.92□□□□□ -0.98
GTF2H3-210ENST00000543005 EVA1BQ9NVM1 165 aa8.92□□□□□ -0.98
GTF2H3-210ENST00000543005 MS4A1P11836 297 aa8.91□□□□□ -0.98
GTF2H3-210ENST00000543005 TIMP2P16035 220 aa8.91□□□□□ -0.98
GTF2H3-210ENST00000543005 NNTQ13423 1086 aa8.91□□□□□ -0.98
GTF2H3-210ENST00000543005 PTPRNQ16849 979 aa8.91□□□□□ -0.98
GTF2H3-210ENST00000543005 UNC93B1Q9H1C4 597 aa8.91□□□□□ -0.98
GTF2H3-210ENST00000543005 TLL2Q9Y6L7 1015 aa8.91□□□□□ -0.98
GTF2H3-210ENST00000543005 ADH1CP00326 375 aa8.89□□□□□ -0.99
GTF2H3-210ENST00000543005 PURBQ96QR8 312 aaKnown RBP8.89□□□□□ -0.99
GTF2H3-210ENST00000543005 KCTD17Q8N5Z5 321 aa8.88□□□□□ -0.99
GTF2H3-210ENST00000543005 ZNF511Q8NB15 262 aa8.88□□□□□ -0.99
GTF2H3-210ENST00000543005 BAP1Q92560 729 aa8.88□□□□□ -0.99
GTF2H3-210ENST00000543005 FAM217BQ9NTX9 383 aaPredicted RBP8.88□□□□□ -0.99
GTF2H3-210ENST00000543005 PCDHGC3Q9UN70 934 aa8.88□□□□□ -0.99
GTF2H3-210ENST00000543005 MINK1Q8N4C8 1332 aaPredicted RBP8.87□□□□□ -0.99
GTF2H3-210ENST00000543005 WDR4P57081 412 aaKnown RBP8.87□□□□□ -0.99
GTF2H3-210ENST00000543005 KCNH2Q12809 1159 aa8.87□□□□□ -0.99
GTF2H3-210ENST00000543005 GPCPD1Q9NPB8 672 aa8.87□□□□□ -0.99
GTF2H3-210ENST00000543005 SOBPA7XYQ1 873 aa8.86□□□□□ -0.99
GTF2H3-210ENST00000543005 FDX1P10109 184 aa8.86□□□□□ -0.99
GTF2H3-210ENST00000543005 NUTM1Q86Y26 1132 aa8.86□□□□□ -0.99
GTF2H3-210ENST00000543005 CLCN1P35523 988 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms