RNA–Protein interactions for RNA: ENST00000542936.1

PACRG-207, Transcript of parkin coregulated, humanhuman

TSL 3

Gene PACRG, Length 415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACRG-207ENST00000542936 ATP6V1AP38606 617 aa10.25□□□□□ -0.77
PACRG-207ENST00000542936 MORN1Q5T089 497 aa10.25□□□□□ -0.77
PACRG-207ENST00000542936 BARGINQ6ZT62 677 aa10.25□□□□□ -0.77
PACRG-207ENST00000542936 CCER1Q8TC90 406 aaPredicted RBP10.25□□□□□ -0.77
PACRG-207ENST00000542936 GOLGA3Q08378 1498 aa10.24□□□□□ -0.77
PACRG-207ENST00000542936 SLC19A1P41440 591 aa10.24□□□□□ -0.77
PACRG-207ENST00000542936 GPCPD1Q9NPB8 672 aa10.24□□□□□ -0.77
PACRG-207ENST00000542936 CLCN1P35523 988 aa10.23□□□□□ -0.77
PACRG-207ENST00000542936 SPSB2Q99619 263 aa10.23□□□□□ -0.77
PACRG-207ENST00000542936 SLC6A16Q9GZN6 736 aa10.23□□□□□ -0.77
PACRG-207ENST00000542936 SLC27A5Q9Y2P5 690 aa10.23□□□□□ -0.77
PACRG-207ENST00000542936 TTBK1Q5TCY1 1321 aaPredicted RBP10.23□□□□□ -0.77
PACRG-207ENST00000542936 BAZ1BQ9UIG0 1483 aaKnown RBP10.23□□□□□ -0.77
PACRG-207ENST00000542936 ANKLE1Q8NAG6 615 aa10.22□□□□□ -0.77
PACRG-207ENST00000542936 REPIN1Q9BWE0 567 aaKnown RBP10.21□□□□□ -0.77
PACRG-207ENST00000542936 SLC24A1O60721 1099 aa10.2□□□□□ -0.78
PACRG-207ENST00000542936 TTLL12Q14166 644 aaPredicted RBP10.2□□□□□ -0.78
PACRG-207ENST00000542936 HLA-CQ95604 372 aa10.2□□□□□ -0.78
PACRG-207ENST00000542936 FAM217BQ9NTX9 383 aaPredicted RBP10.2□□□□□ -0.78
PACRG-207ENST00000542936 CEP164Q9UPV0 1460 aa10.19□□□□□ -0.78
PACRG-207ENST00000542936 KDM4AO75164 1064 aa10.19□□□□□ -0.78
PACRG-207ENST00000542936 FMNL1O95466 1100 aaPredicted RBP10.19□□□□□ -0.78
PACRG-207ENST00000542936 GRIPAP1Q4V328 841 aa10.19□□□□□ -0.78
PACRG-207ENST00000542936 EMID1Q96A84 441 aaPredicted RBP10.19□□□□□ -0.78
PACRG-207ENST00000542936 SYNJ1O43426 1573 aa10.18□□□□□ -0.78
PACRG-207ENST00000542936 SPRYD7Q5W111 196 aa10.18□□□□□ -0.78
PACRG-207ENST00000542936 RNF19BQ6ZMZ0 732 aa10.18□□□□□ -0.78
PACRG-207ENST00000542936 THAP11Q96EK4 314 aa10.17□□□□□ -0.78
PACRG-207ENST00000542936 PRDM9Q9NQV7 894 aa10.17□□□□□ -0.78
PACRG-207ENST00000542936 GUCA2AQ02747 115 aa10.16□□□□□ -0.78
PACRG-207ENST00000542936 TRIM67Q6ZTA4 783 aa10.16□□□□□ -0.78
PACRG-207ENST00000542936 ZNF598Q86UK7 904 aaKnown RBP10.16□□□□□ -0.78
PACRG-207ENST00000542936 LIAT1Q6ZQX7 453 aa10.15□□□□□ -0.78
PACRG-207ENST00000542936 SSTR3P32745 418 aaPredicted RBP10.14□□□□□ -0.79
PACRG-207ENST00000542936 PLA2G2CQ5R387 149 aa10.14□□□□□ -0.79
PACRG-207ENST00000542936 NUTM1Q86Y26 1132 aa10.14□□□□□ -0.79
PACRG-207ENST00000542936 FAM160A2Q8N612 972 aaPredicted RBP10.14□□□□□ -0.79
PACRG-207ENST00000542936 CLIP1P30622 1438 aa10.14□□□□□ -0.79
PACRG-207ENST00000542936 KIF21BO75037 1637 aa10.14□□□□□ -0.79
PACRG-207ENST00000542936 HOXA2O43364 376 aa10.13□□□□□ -0.79
PACRG-207ENST00000542936 ZNF697Q5TEC3 545 aa10.13□□□□□ -0.79
PACRG-207ENST00000542936 BRICD5Q6PL45 260 aa10.13□□□□□ -0.79
PACRG-207ENST00000542936 GIGYF2Q6Y7W6 1299 aaKnown RBP10.13□□□□□ -0.79
PACRG-207ENST00000542936 PRR20EP86478 221 aa10.12□□□□□ -0.79
PACRG-207ENST00000542936 PRR20CP86479 221 aa10.12□□□□□ -0.79
PACRG-207ENST00000542936 PRR20DP86480 221 aa10.12□□□□□ -0.79
PACRG-207ENST00000542936 PRR20BP86481 221 aa10.12□□□□□ -0.79
PACRG-207ENST00000542936 PRR20AP86496 221 aa10.12□□□□□ -0.79
PACRG-207ENST00000542936 AMHR2Q16671 573 aa10.12□□□□□ -0.79
PACRG-207ENST00000542936 PKDCCQ504Y2 493 aa10.12□□□□□ -0.79
PACRG-207ENST00000542936 FCF1Q9Y324 198 aaKnown RBP10.12□□□□□ -0.79
PACRG-207ENST00000542936 TRIM66O15016 1216 aa10.11□□□□□ -0.79
PACRG-207ENST00000542936 USP46P62068 366 aa10.11□□□□□ -0.79
PACRG-207ENST00000542936 ZNF787Q6DD87 383 aa10.11□□□□□ -0.79
PACRG-207ENST00000542936 SLC24A3Q9HC58 644 aa10.11□□□□□ -0.79
PACRG-207ENST00000542936 Q3C1V9 767 aa10.1□□□□□ -0.79
PACRG-207ENST00000542936 AK7Q96M32 723 aa10.1□□□□□ -0.79
PACRG-207ENST00000542936 PARP9Q8IXQ6 854 aa10.09□□□□□ -0.79
PACRG-207ENST00000542936 SYMPKQ92797 1274 aaKnown RBP10.09□□□□□ -0.79
PACRG-207ENST00000542936 SALL2Q9Y467 1007 aaPredicted RBP10.09□□□□□ -0.79
PACRG-207ENST00000542936 RAPGEF2Q9Y4G8 1499 aa10.09□□□□□ -0.79
PACRG-207ENST00000542936 VPS8Q8N3P4 1428 aa10.08□□□□□ -0.8
PACRG-207ENST00000542936 DGAT1O75907 488 aa10.08□□□□□ -0.8
PACRG-207ENST00000542936 BCANQ96GW7 911 aa10.08□□□□□ -0.8
PACRG-207ENST00000542936 NCAPD3P42695 1498 aa10.08□□□□□ -0.8
PACRG-207ENST00000542936 TNFRSF10AO00220 468 aa10.07□□□□□ -0.8
PACRG-207ENST00000542936 GDF9O60383 454 aa10.07□□□□□ -0.8
PACRG-207ENST00000542936 USB1Q9BQ65 265 aaKnown RBP10.07□□□□□ -0.8
PACRG-207ENST00000542936 NDUFV2P19404 249 aa10.06□□□□□ -0.8
PACRG-207ENST00000542936 MSS51Q4VC12 460 aa10.06□□□□□ -0.8
PACRG-207ENST00000542936 SPIRE2Q8WWL2 714 aa10.06□□□□□ -0.8
PACRG-207ENST00000542936 BEGAINQ9BUH8 593 aa10.06□□□□□ -0.8
PACRG-207ENST00000542936 TOP2BQ02880 1626 aa10.06□□□□□ -0.8
PACRG-207ENST00000542936 FDX1P10109 184 aa10.05□□□□□ -0.8
PACRG-207ENST00000542936 MYT1Q01538 1121 aa10.05□□□□□ -0.8
PACRG-207ENST00000542936 FAM187AA6NFU0 413 aa10.04□□□□□ -0.8
PACRG-207ENST00000542936 MOXD2PA6NHM9 499 aa10.04□□□□□ -0.8
PACRG-207ENST00000542936 MS4A1P11836 297 aa10.04□□□□□ -0.8
PACRG-207ENST00000542936 RANGAP1P46060 587 aaPredicted RBP10.04□□□□□ -0.8
PACRG-207ENST00000542936 DIEXFQ68CQ4 756 aaKnown RBP10.04□□□□□ -0.8
PACRG-207ENST00000542936 HMGXB3Q12766 1538 aa10.03□□□□□ -0.8
PACRG-207ENST00000542936 PDE4DQ08499 809 aa10.03□□□□□ -0.8
PACRG-207ENST00000542936 CCDC24Q8N4L8 307 aa10.03□□□□□ -0.8
PACRG-207ENST00000542936 C6orf229H3BNL8 230 aa10.02□□□□□ -0.81
PACRG-207ENST00000542936 RPIAP49247 311 aa10.02□□□□□ -0.81
PACRG-207ENST00000542936 FOXC1Q12948 553 aa10.02□□□□□ -0.81
PACRG-207ENST00000542936 PCDHGC3Q9UN70 934 aa10.02□□□□□ -0.81
PACRG-207ENST00000542936 PRXQ9BXM0 1461 aa10.02□□□□□ -0.81
PACRG-207ENST00000542936 BIVM-ERCC5R4GMW8 1640 aa10.01□□□□□ -0.81
PACRG-207ENST00000542936 ZBTB24O43167 697 aaPredicted RBP10.01□□□□□ -0.81
PACRG-207ENST00000542936 CD2BP2O95400 341 aaKnown RBP10□□□□□ -0.81
PACRG-207ENST00000542936 MMP16P51512 607 aa10□□□□□ -0.81
PACRG-207ENST00000542936 CUX1P39880 1505 aa10□□□□□ -0.81
PACRG-207ENST00000542936 TBC1D2Q9BYX2 928 aa9.99□□□□□ -0.81
PACRG-207ENST00000542936 PKD2L1Q9P0L9 805 aa9.99□□□□□ -0.81
PACRG-207ENST00000542936 ACIN1Q9UKV3 1341 aaKnown RBP9.99□□□□□ -0.81
PACRG-207ENST00000542936 ERICH3Q5RHP9 1530 aa9.98□□□□□ -0.81
PACRG-207ENST00000542936 DXOO77932 396 aaKnown RBP9.98□□□□□ -0.81
PACRG-207ENST00000542936 KIF27Q86VH2 1401 aa9.98□□□□□ -0.81
PACRG-207ENST00000542936 CFTRP13569 1480 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms