RNA–Protein interactions for RNA: ENST00000542930.1

C2CD3-219, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 3

Gene C2CD3, Length 524 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-219ENST00000542930 NUP155O75694 1391 aa14.56□□□□□ -0.08
C2CD3-219ENST00000542930 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.55□□□□□ -0.08
C2CD3-219ENST00000542930 MARF1Q9Y4F3 1742 aaKnown RBP14.55□□□□□ -0.08
C2CD3-219ENST00000542930 ROBO2Q9HCK4 1378 aa14.55□□□□□ -0.08
C2CD3-219ENST00000542930 GLI3P10071 1580 aa14.55□□□□□ -0.08
C2CD3-219ENST00000542930 LOC105371045A0A1W2PR82 267 aa14.54□□□□□ -0.08
C2CD3-219ENST00000542930 HRCP23327 699 aa14.54□□□□□ -0.08
C2CD3-219ENST00000542930 PXDNQ92626 1479 aa14.54□□□□□ -0.08
C2CD3-219ENST00000542930 SPHKAPQ2M3C7 1700 aa14.54□□□□□ -0.08
C2CD3-219ENST00000542930 SLIT2O94813 1529 aa14.53□□□□□ -0.08
C2CD3-219ENST00000542930 ESCO1Q5FWF5 840 aa14.53□□□□□ -0.08
C2CD3-219ENST00000542930 NEXMIFQ5QGS0 1516 aa14.52□□□□□ -0.08
C2CD3-219ENST00000542930 PRAG1Q86YV5 1406 aa14.52□□□□□ -0.08
C2CD3-219ENST00000542930 PSDA5PKW4 1024 aaPredicted RBP14.52□□□□□ -0.09
C2CD3-219ENST00000542930 SEPT12Q8IYM1 358 aa14.52□□□□□ -0.09
C2CD3-219ENST00000542930 HFM1A2PYH4 1435 aa14.51□□□□□ -0.09
C2CD3-219ENST00000542930 ROCK1Q13464 1354 aa14.51□□□□□ -0.09
C2CD3-219ENST00000542930 FOXO3O43524 673 aa14.51□□□□□ -0.09
C2CD3-219ENST00000542930 BRWD3Q6RI45 1802 aa14.5□□□□□ -0.09
C2CD3-219ENST00000542930 LRPPRCP42704 1394 aaKnown RBP14.5□□□□□ -0.09
C2CD3-219ENST00000542930 ONECUT3O60422 494 aaPredicted RBP14.5□□□□□ -0.09
C2CD3-219ENST00000542930 BAG6P46379 1132 aa14.49□□□□□ -0.09
C2CD3-219ENST00000542930 XPCQ01831 940 aaPredicted RBP14.49□□□□□ -0.09
C2CD3-219ENST00000542930 KRT27Q7Z3Y8 459 aa14.49□□□□□ -0.09
C2CD3-219ENST00000542930 VPS72Q15906 364 aa14.48□□□□□ -0.09
C2CD3-219ENST00000542930 VGFO15240 615 aaPredicted RBP14.47□□□□□ -0.09
C2CD3-219ENST00000542930 CDC42BPGQ6DT37 1551 aa14.47□□□□□ -0.09
C2CD3-219ENST00000542930 SPATA31A3Q5VYP0 1347 aa14.45□□□□□ -0.1
C2CD3-219ENST00000542930 USP32Q8NFA0 1604 aa14.44□□□□□ -0.1
C2CD3-219ENST00000542930 CCDC9Q9Y3X0 531 aaKnown RBP14.43□□□□□ -0.1
C2CD3-219ENST00000542930 CLTCL1P53675 1640 aa14.43□□□□□ -0.1
C2CD3-219ENST00000542930 YY1P25490 414 aa14.42□□□□□ -0.1
C2CD3-219ENST00000542930 R3HDM1Q15032 1099 aaKnown RBP14.42□□□□□ -0.1
C2CD3-219ENST00000542930 NUTM2FA1L443 756 aa14.41□□□□□ -0.1
C2CD3-219ENST00000542930 HAP1P54257 671 aaPredicted RBP14.41□□□□□ -0.1
C2CD3-219ENST00000542930 EN1Q05925 392 aaPredicted RBP14.41□□□□□ -0.1
C2CD3-219ENST00000542930 CCDC144AA2RUR9 1427 aa14.41□□□□□ -0.1
C2CD3-219ENST00000542930 NAIPQ13075 1403 aa14.41□□□□□ -0.1
C2CD3-219ENST00000542930 RPGRIP1LQ68CZ1 1315 aa14.41□□□□□ -0.1
C2CD3-219ENST00000542930 KRT28Q7Z3Y7 464 aa14.4□□□□□ -0.1
C2CD3-219ENST00000542930 KIF1BO60333 1816 aa14.4□□□□□ -0.1
C2CD3-219ENST00000542930 NWD2Q9ULI1 1742 aa14.4□□□□□ -0.1
C2CD3-219ENST00000542930 A0A0G2JS52 829 aa14.39□□□□□ -0.11
C2CD3-219ENST00000542930 MYT1Q01538 1121 aa14.39□□□□□ -0.11
C2CD3-219ENST00000542930 PLCH1Q4KWH8 1693 aa14.37□□□□□ -0.11
C2CD3-219ENST00000542930 CABLES1Q8TDN4 633 aa14.37□□□□□ -0.11
C2CD3-219ENST00000542930 DISP2A7MBM2 1401 aa14.37□□□□□ -0.11
C2CD3-219ENST00000542930 TNS3Q68CZ2 1445 aa14.36□□□□□ -0.11
C2CD3-219ENST00000542930 PSME1Q06323 249 aa14.36□□□□□ -0.11
C2CD3-219ENST00000542930 FAM98CQ17RN3 349 aaKnown RBP14.36□□□□□ -0.11
C2CD3-219ENST00000542930 WAPLQ7Z5K2 1190 aa14.36□□□□□ -0.11
C2CD3-219ENST00000542930 KIF1AQ12756 1690 aa14.36□□□□□ -0.11
C2CD3-219ENST00000542930 RGPD1P0DJD0 1748 aa14.35□□□□□ -0.11
C2CD3-219ENST00000542930 TECPR2O15040 1411 aa14.35□□□□□ -0.11
C2CD3-219ENST00000542930 FAM83GA6ND36 823 aa14.35□□□□□ -0.11
C2CD3-219ENST00000542930 ITGAEP38570 1179 aa14.34□□□□□ -0.11
C2CD3-219ENST00000542930 EZH2Q15910 746 aaKnown RBP14.34□□□□□ -0.11
C2CD3-219ENST00000542930 STK26Q9P289 416 aa14.33□□□□□ -0.12
C2CD3-219ENST00000542930 SBNO1A3KN83 1393 aa14.33□□□□□ -0.12
C2CD3-219ENST00000542930 PLEKHG5O94827 1062 aa14.32□□□□□ -0.12
C2CD3-219ENST00000542930 FAM182BQ5T319 152 aa14.32□□□□□ -0.12
C2CD3-219ENST00000542930 PHF8Q9UPP1 1060 aa14.32□□□□□ -0.12
C2CD3-219ENST00000542930 ARHGEF10O15013 1369 aa14.32□□□□□ -0.12
C2CD3-219ENST00000542930 ABCC11Q96J66 1382 aa14.32□□□□□ -0.12
C2CD3-219ENST00000542930 FMN2Q9NZ56 1722 aa14.32□□□□□ -0.12
C2CD3-219ENST00000542930 LMOD2Q6P5Q4 547 aa14.31□□□□□ -0.12
C2CD3-219ENST00000542930 CAMKK2Q96RR4 588 aa14.31□□□□□ -0.12
C2CD3-219ENST00000542930 BTG4Q9NY30 223 aa14.31□□□□□ -0.12
C2CD3-219ENST00000542930 PPLO60437 1756 aa14.31□□□□□ -0.12
C2CD3-219ENST00000542930 PLEKHH1Q9ULM0 1364 aa14.31□□□□□ -0.12
C2CD3-219ENST00000542930 DCAF8L1A6NGE4 600 aa14.29□□□□□ -0.12
C2CD3-219ENST00000542930 PARD3Q8TEW0 1356 aa14.29□□□□□ -0.12
C2CD3-219ENST00000542930 ABCA3Q99758 1704 aa14.29□□□□□ -0.12
C2CD3-219ENST00000542930 TNS1Q9HBL0 1735 aaKnown RBP14.29□□□□□ -0.12
C2CD3-219ENST00000542930 SPATA31A5Q5VU36 1347 aa14.28□□□□□ -0.12
C2CD3-219ENST00000542930 NRAPQ86VF7 1730 aa14.28□□□□□ -0.12
C2CD3-219ENST00000542930 SPATA31A7Q8IWB4 1347 aa14.28□□□□□ -0.12
C2CD3-219ENST00000542930 ADGRF5Q8IZF2 1346 aa14.28□□□□□ -0.12
C2CD3-219ENST00000542930 ADGRB2O60241 1585 aa14.27□□□□□ -0.12
C2CD3-219ENST00000542930 NRXN1Q9ULB1 1477 aa14.27□□□□□ -0.12
C2CD3-219ENST00000542930 TRIM37O94972 964 aa14.26□□□□□ -0.13
C2CD3-219ENST00000542930 APBA3O96018 575 aa14.26□□□□□ -0.13
C2CD3-219ENST00000542930 TMEM132EQ6IEE7 984 aa14.26□□□□□ -0.13
C2CD3-219ENST00000542930 FAM196AQ6ZSG2 479 aa14.26□□□□□ -0.13
C2CD3-219ENST00000542930 SIRT1Q96EB6 747 aa14.26□□□□□ -0.13
C2CD3-219ENST00000542930 KNDC1Q76NI1 1749 aa14.26□□□□□ -0.13
C2CD3-219ENST00000542930 RRBP1Q9P2E9 1410 aaKnown RBP14.25□□□□□ -0.13
C2CD3-219ENST00000542930 PPP1R1BQ9UD71 204 aaPredicted RBP14.25□□□□□ -0.13
C2CD3-219ENST00000542930 THSD7AQ9UPZ6 1657 aa14.25□□□□□ -0.13
C2CD3-219ENST00000542930 COL14A1Q05707 1796 aaKnown RBP14.24□□□□□ -0.13
C2CD3-219ENST00000542930 UTRNP46939 3433 aa14.24□□□□□ -0.13
C2CD3-219ENST00000542930 NBPF8Q3BBV2 869 aa14.24□□□□□ -0.13
C2CD3-219ENST00000542930 NBPF14Q5TI25 921 aa14.24□□□□□ -0.13
C2CD3-219ENST00000542930 SPON1Q9HCB6 807 aa14.24□□□□□ -0.13
C2CD3-219ENST00000542930 NINLQ9Y2I6 1382 aa14.23□□□□□ -0.13
C2CD3-219ENST00000542930 RGPD8O14715 1765 aaPredicted RBP14.23□□□□□ -0.13
C2CD3-219ENST00000542930 YTHDC2Q9H6S0 1430 aaKnown RBP14.23□□□□□ -0.13
C2CD3-219ENST00000542930 ANKRD30BQ9BXX2 1392 aa14.22□□□□□ -0.13
C2CD3-219ENST00000542930 IFT172Q9UG01 1749 aa14.21□□□□□ -0.13
C2CD3-219ENST00000542930 KCNQ2O43526 872 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms