RNA–Protein interactions for RNA: ENST00000542846.5

LRTOMT-220, Transcript of leucine rich transmembrane and O-methyltransferase domain containing, humanhuman

TSL 5

Gene LRTOMT, Length 527 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTOMT-220ENST00000542846 PLEKHH1Q9ULM0 1364 aa9.11□□□□□ -0.95
LRTOMT-220ENST00000542846 C1orf167Q5SNV9 1468 aa9.1□□□□□ -0.95
LRTOMT-220ENST00000542846 BRINP3Q76B58 766 aa9.1□□□□□ -0.95
LRTOMT-220ENST00000542846 ADGRB2O60241 1585 aa9.1□□□□□ -0.95
LRTOMT-220ENST00000542846 ARHGEF28Q8N1W1 1705 aaKnown RBP9.1□□□□□ -0.95
LRTOMT-220ENST00000542846 SHPRHQ149N8 1683 aa9.1□□□□□ -0.95
LRTOMT-220ENST00000542846 WAPLQ7Z5K2 1190 aa9.09□□□□□ -0.95
LRTOMT-220ENST00000542846 JCADQ9P266 1359 aa9.09□□□□□ -0.95
LRTOMT-220ENST00000542846 SIN3AQ96ST3 1273 aa9.07□□□□□ -0.96
LRTOMT-220ENST00000542846 KIF1AQ12756 1690 aa9.07□□□□□ -0.96
LRTOMT-220ENST00000542846 TRPM1Q7Z4N2 1603 aa9.06□□□□□ -0.96
LRTOMT-220ENST00000542846 L3MBTL2Q969R5 705 aa9.06□□□□□ -0.96
LRTOMT-220ENST00000542846 PRAM1Q96QH2 718 aa9.06□□□□□ -0.96
LRTOMT-220ENST00000542846 RGPD8O14715 1765 aaPredicted RBP9.05□□□□□ -0.96
LRTOMT-220ENST00000542846 ORAI2Q96SN7 254 aa9.05□□□□□ -0.96
LRTOMT-220ENST00000542846 POGKQ9P215 609 aa9.05□□□□□ -0.96
LRTOMT-220ENST00000542846 TRAK1Q9UPV9 953 aa9.05□□□□□ -0.96
LRTOMT-220ENST00000542846 USP32Q8NFA0 1604 aa9.05□□□□□ -0.96
LRTOMT-220ENST00000542846 NEUROD1Q13562 356 aa9.04□□□□□ -0.96
LRTOMT-220ENST00000542846 ANKARQ7Z5J8 1434 aa9.04□□□□□ -0.96
LRTOMT-220ENST00000542846 SOS2Q07890 1332 aaPredicted RBP9.04□□□□□ -0.96
LRTOMT-220ENST00000542846 SPATA31A6Q5VVP1 1343 aa9.04□□□□□ -0.96
LRTOMT-220ENST00000542846 EIF3AQ14152 1382 aaKnown RBP9.03□□□□□ -0.96
LRTOMT-220ENST00000542846 SAFB2Q14151 953 aaKnown RBP eCLIP9.03□□□□□ -0.96
LRTOMT-220ENST00000542846 ESCO1Q5FWF5 840 aa9.03□□□□□ -0.96
LRTOMT-220ENST00000542846 LRRC59Q96AG4 307 aaKnown RBP9.03□□□□□ -0.96
LRTOMT-220ENST00000542846 NPHP3Q7Z494 1330 aa9.03□□□□□ -0.96
LRTOMT-220ENST00000542846 PXDNQ92626 1479 aa9.02□□□□□ -0.96
LRTOMT-220ENST00000542846 LRP6O75581 1613 aa9.02□□□□□ -0.96
LRTOMT-220ENST00000542846 COL22A1Q8NFW1 1626 aaPredicted RBP9.02□□□□□ -0.96
LRTOMT-220ENST00000542846 TULP4Q9NRJ4 1543 aa9.02□□□□□ -0.97
LRTOMT-220ENST00000542846 NBPF1Q3BBV0 1214 aa9.02□□□□□ -0.97
LRTOMT-220ENST00000542846 DDX17Q92841 729 aaKnown RBP9.02□□□□□ -0.97
LRTOMT-220ENST00000542846 PHF23Q9BUL5 403 aaPredicted RBP9.02□□□□□ -0.97
LRTOMT-220ENST00000542846 ITSN1Q15811 1721 aa9.02□□□□□ -0.97
LRTOMT-220ENST00000542846 PNPLA6Q8IY17 1366 aa9.01□□□□□ -0.97
LRTOMT-220ENST00000542846 TONSLQ96HA7 1378 aa9.01□□□□□ -0.97
LRTOMT-220ENST00000542846 QRICH2Q9H0J4 1663 aa9.01□□□□□ -0.97
LRTOMT-220ENST00000542846 NUTM2FA1L443 756 aa9.01□□□□□ -0.97
LRTOMT-220ENST00000542846 MINK1Q8N4C8 1332 aaPredicted RBP9.01□□□□□ -0.97
LRTOMT-220ENST00000542846 WASLO00401 505 aaPredicted RBP9□□□□□ -0.97
LRTOMT-220ENST00000542846 ILDR2Q71H61 639 aa9□□□□□ -0.97
LRTOMT-220ENST00000542846 ATP7BP35670 1465 aa9□□□□□ -0.97
LRTOMT-220ENST00000542846 TOPAZ1Q8N9V7 1692 aa9□□□□□ -0.97
LRTOMT-220ENST00000542846 GPRASP1Q5JY77 1395 aa8.99□□□□□ -0.97
LRTOMT-220ENST00000542846 FOXO3O43524 673 aa8.99□□□□□ -0.97
LRTOMT-220ENST00000542846 HIRIP3Q9BW71 556 aaPredicted RBP8.99□□□□□ -0.97
LRTOMT-220ENST00000542846 PHF8Q9UPP1 1060 aa8.99□□□□□ -0.97
LRTOMT-220ENST00000542846 RALGAPBQ86X10 1494 aa8.99□□□□□ -0.97
LRTOMT-220ENST00000542846 PRR36Q9H6K5 1346 aa8.99□□□□□ -0.97
LRTOMT-220ENST00000542846 ROCK2O75116 1388 aaKnown RBP8.99□□□□□ -0.97
LRTOMT-220ENST00000542846 TRPM3Q9HCF6 1732 aaPredicted RBP8.98□□□□□ -0.97
LRTOMT-220ENST00000542846 NBPF8Q3BBV2 869 aa8.98□□□□□ -0.97
LRTOMT-220ENST00000542846 PCGF6Q9BYE7 350 aa8.98□□□□□ -0.97
LRTOMT-220ENST00000542846 RGS17Q9UGC6 210 aaPredicted RBP8.98□□□□□ -0.97
LRTOMT-220ENST00000542846 CENPJQ9HC77 1338 aaPredicted RBP8.98□□□□□ -0.97
LRTOMT-220ENST00000542846 MARF1Q9Y4F3 1742 aaKnown RBP8.97□□□□□ -0.97
LRTOMT-220ENST00000542846 CLSPNQ9HAW4 1339 aa8.97□□□□□ -0.97
LRTOMT-220ENST00000542846 TNS3Q68CZ2 1445 aa8.97□□□□□ -0.97
LRTOMT-220ENST00000542846 NUTM2BA6NNL0 878 aaPredicted RBP8.96□□□□□ -0.98
LRTOMT-220ENST00000542846 NUTM2EB1AL46 878 aaPredicted RBP8.96□□□□□ -0.98
LRTOMT-220ENST00000542846 XPCQ01831 940 aaPredicted RBP8.96□□□□□ -0.98
LRTOMT-220ENST00000542846 MEX3CQ5U5Q3 659 aaKnown RBP8.96□□□□□ -0.98
LRTOMT-220ENST00000542846 KRT28Q7Z3Y7 464 aa8.96□□□□□ -0.98
LRTOMT-220ENST00000542846 NUTM2AQ8IVF1 878 aaPredicted RBP8.96□□□□□ -0.98
LRTOMT-220ENST00000542846 ALS2Q96Q42 1657 aa8.96□□□□□ -0.98
LRTOMT-220ENST00000542846 SPATA31A3Q5VYP0 1347 aa8.96□□□□□ -0.98
LRTOMT-220ENST00000542846 ABCA3Q99758 1704 aa8.96□□□□□ -0.98
LRTOMT-220ENST00000542846 SBNO1A3KN83 1393 aa8.96□□□□□ -0.98
LRTOMT-220ENST00000542846 PSME1Q06323 249 aa8.95□□□□□ -0.98
LRTOMT-220ENST00000542846 PMFBP1Q8TBY8 1022 aa8.95□□□□□ -0.98
LRTOMT-220ENST00000542846 NUDT16Q96DE0 195 aaKnown RBP8.95□□□□□ -0.98
LRTOMT-220ENST00000542846 CDK19Q9BWU1 502 aa8.95□□□□□ -0.98
LRTOMT-220ENST00000542846 ARHGEF10O15013 1369 aa8.94□□□□□ -0.98
LRTOMT-220ENST00000542846 SBNO2Q9Y2G9 1366 aa8.94□□□□□ -0.98
LRTOMT-220ENST00000542846 ZNF772Q68DY9 489 aaPredicted RBP8.93□□□□□ -0.98
LRTOMT-220ENST00000542846 POTEAQ6S8J7 498 aa8.93□□□□□ -0.98
LRTOMT-220ENST00000542846 CARD11Q9BXL7 1154 aa8.93□□□□□ -0.98
LRTOMT-220ENST00000542846 TIMELESSQ9UNS1 1208 aa8.93□□□□□ -0.98
LRTOMT-220ENST00000542846 CCDC61Q9Y6R9 512 aa8.93□□□□□ -0.98
LRTOMT-220ENST00000542846 POLR3AO14802 1390 aaPredicted RBP8.93□□□□□ -0.98
LRTOMT-220ENST00000542846 CRYBG1Q9Y4K1 1723 aa8.93□□□□□ -0.98
LRTOMT-220ENST00000542846 AFF2P51816 1311 aa8.92□□□□□ -0.98
LRTOMT-220ENST00000542846 PLEKHG3A1L390 1219 aa8.92□□□□□ -0.98
LRTOMT-220ENST00000542846 SOCS7O14512 581 aa8.92□□□□□ -0.98
LRTOMT-220ENST00000542846 SRPK2P78362 688 aaKnown RBP8.92□□□□□ -0.98
LRTOMT-220ENST00000542846 NGDNQ8NEJ9 315 aaKnown RBP8.92□□□□□ -0.98
LRTOMT-220ENST00000542846 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.91□□□□□ -0.98
LRTOMT-220ENST00000542846 PPIP5K1Q6PFW1 1433 aa8.91□□□□□ -0.98
LRTOMT-220ENST00000542846 EVC2Q86UK5 1308 aa8.91□□□□□ -0.98
LRTOMT-220ENST00000542846 ADAMTS2O95450 1211 aa8.91□□□□□ -0.98
LRTOMT-220ENST00000542846 C8orf37Q96NL8 207 aa8.91□□□□□ -0.98
LRTOMT-220ENST00000542846 ACEP12821 1306 aa8.9□□□□□ -0.98
LRTOMT-220ENST00000542846 CABP2Q9NPB3 220 aa8.9□□□□□ -0.98
LRTOMT-220ENST00000542846 AKAP12Q02952 1782 aa8.9□□□□□ -0.98
LRTOMT-220ENST00000542846 PHRF1Q9P1Y6 1649 aaKnown RBP8.9□□□□□ -0.99
LRTOMT-220ENST00000542846 BRD4O60885 1362 aaPredicted RBP8.89□□□□□ -0.99
LRTOMT-220ENST00000542846 NWD2Q9ULI1 1742 aa8.89□□□□□ -0.99
LRTOMT-220ENST00000542846 PLCH1Q4KWH8 1693 aa8.89□□□□□ -0.99
LRTOMT-220ENST00000542846 FNBP4Q8N3X1 1017 aaPredicted RBP8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms