RNA–Protein interactions for RNA: ENST00000542685.5

XRCC4-206, Transcript of X-ray repair cross complementing 4, humanhuman

TSL 1 (best)

Gene XRCC4, Length 1,243 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-206ENST00000542685 USB1Q9BQ65 265 aaKnown RBP11.72□□□□□ -0.53
XRCC4-206ENST00000542685 BEGAINQ9BUH8 593 aa11.72□□□□□ -0.53
XRCC4-206ENST00000542685 ZNF598Q86UK7 904 aaKnown RBP11.71□□□□□ -0.53
XRCC4-206ENST00000542685 SPIRE2Q8WWL2 714 aa11.71□□□□□ -0.53
XRCC4-206ENST00000542685 SYMPKQ92797 1274 aaKnown RBP11.71□□□□□ -0.53
XRCC4-206ENST00000542685 NRG2O14511 850 aaPredicted RBP11.69□□□□□ -0.54
XRCC4-206ENST00000542685 MS4A1P11836 297 aa11.69□□□□□ -0.54
XRCC4-206ENST00000542685 PDE4DQ08499 809 aa11.69□□□□□ -0.54
XRCC4-206ENST00000542685 ZNF697Q5TEC3 545 aa11.69□□□□□ -0.54
XRCC4-206ENST00000542685 FDX1P10109 184 aa11.68□□□□□ -0.54
XRCC4-206ENST00000542685 NDUFV2P19404 249 aa11.68□□□□□ -0.54
XRCC4-206ENST00000542685 PCDHGC3Q9UN70 934 aa11.67□□□□□ -0.54
XRCC4-206ENST00000542685 MOXD2PA6NHM9 499 aa11.66□□□□□ -0.54
XRCC4-206ENST00000542685 MMP16P51512 607 aa11.66□□□□□ -0.54
XRCC4-206ENST00000542685 TRIM67Q6ZTA4 783 aa11.66□□□□□ -0.54
XRCC4-206ENST00000542685 C6orf229H3BNL8 230 aa11.65□□□□□ -0.54
XRCC4-206ENST00000542685 DXOO77932 396 aaKnown RBP11.64□□□□□ -0.55
XRCC4-206ENST00000542685 TBC1D2Q9BYX2 928 aa11.64□□□□□ -0.55
XRCC4-206ENST00000542685 TNFRSF10AO00220 468 aa11.63□□□□□ -0.55
XRCC4-206ENST00000542685 ZBTB24O43167 697 aaPredicted RBP11.63□□□□□ -0.55
XRCC4-206ENST00000542685 CD2BP2O95400 341 aaKnown RBP11.63□□□□□ -0.55
XRCC4-206ENST00000542685 RPIAP49247 311 aa11.63□□□□□ -0.55
XRCC4-206ENST00000542685 CCDC24Q8N4L8 307 aa11.63□□□□□ -0.55
XRCC4-206ENST00000542685 RETREG3Q86VR2 466 aa11.62□□□□□ -0.55
XRCC4-206ENST00000542685 FOXC1Q12948 553 aa11.61□□□□□ -0.55
XRCC4-206ENST00000542685 DIXDC1Q155Q3 683 aa11.6□□□□□ -0.55
XRCC4-206ENST00000542685 GDF9O60383 454 aa11.59□□□□□ -0.55
XRCC4-206ENST00000542685 JUNDP17535 347 aa11.59□□□□□ -0.55
XRCC4-206ENST00000542685 PRR20EP86478 221 aa11.59□□□□□ -0.55
XRCC4-206ENST00000542685 PRR20CP86479 221 aa11.59□□□□□ -0.55
XRCC4-206ENST00000542685 PRR20DP86480 221 aa11.59□□□□□ -0.55
XRCC4-206ENST00000542685 PRR20BP86481 221 aa11.59□□□□□ -0.55
XRCC4-206ENST00000542685 PRR20AP86496 221 aa11.59□□□□□ -0.55
XRCC4-206ENST00000542685 TRAF7Q6Q0C0 670 aa11.58□□□□□ -0.56
XRCC4-206ENST00000542685 LCE2BO14633 110 aa11.57□□□□□ -0.56
XRCC4-206ENST00000542685 RSBN1LQ6PCB5 846 aaPredicted RBP11.57□□□□□ -0.56
XRCC4-206ENST00000542685 PKD2L1Q9P0L9 805 aa11.57□□□□□ -0.56
XRCC4-206ENST00000542685 MTMR2Q13614 643 aa11.56□□□□□ -0.56
XRCC4-206ENST00000542685 TRIM32Q13049 653 aa11.55□□□□□ -0.56
XRCC4-206ENST00000542685 PCDHB15Q9Y5E8 787 aa11.55□□□□□ -0.56
XRCC4-206ENST00000542685 PKDCCQ504Y2 493 aa11.54□□□□□ -0.56
XRCC4-206ENST00000542685 RIC3Q7Z5B4 369 aa11.54□□□□□ -0.56
XRCC4-206ENST00000542685 PRR7Q8TB68 274 aa11.54□□□□□ -0.56
XRCC4-206ENST00000542685 NUDT12Q9BQG2 462 aa11.54□□□□□ -0.56
XRCC4-206ENST00000542685 SPTLC1O15269 473 aa11.53□□□□□ -0.56
XRCC4-206ENST00000542685 GJA5P36382 358 aa11.53□□□□□ -0.56
XRCC4-206ENST00000542685 CSPP1Q1MSJ5 1256 aa11.53□□□□□ -0.56
XRCC4-206ENST00000542685 FAM187AA6NFU0 413 aa11.52□□□□□ -0.57
XRCC4-206ENST00000542685 SPDYE5A6NIY4 337 aa11.51□□□□□ -0.57
XRCC4-206ENST00000542685 MYSM1Q5VVJ2 828 aa11.51□□□□□ -0.57
XRCC4-206ENST00000542685 HRCP23327 699 aa11.5□□□□□ -0.57
XRCC4-206ENST00000542685 GPBP1L1Q9HC44 474 aaPredicted RBP11.5□□□□□ -0.57
XRCC4-206ENST00000542685 DGAT1O75907 488 aa11.49□□□□□ -0.57
XRCC4-206ENST00000542685 PTCRAQ6ISU1 281 aaPredicted RBP11.49□□□□□ -0.57
XRCC4-206ENST00000542685 CABLES1Q8TDN4 633 aa11.49□□□□□ -0.57
XRCC4-206ENST00000542685 ZBTB3Q9H5J0 574 aa11.49□□□□□ -0.57
XRCC4-206ENST00000542685 LIMD1Q9UGP4 676 aa11.49□□□□□ -0.57
XRCC4-206ENST00000542685 CCNYL3P0C7X3 344 aa11.48□□□□□ -0.57
XRCC4-206ENST00000542685 CYP4X1Q8N118 509 aa11.48□□□□□ -0.57
XRCC4-206ENST00000542685 PTPRNQ16849 979 aa11.47□□□□□ -0.57
XRCC4-206ENST00000542685 CFAP99D6REC4 459 aa11.46□□□□□ -0.57
XRCC4-206ENST00000542685 WNT7AO00755 349 aa11.46□□□□□ -0.57
XRCC4-206ENST00000542685 PRPF38BQ5VTL8 546 aaKnown RBP11.46□□□□□ -0.57
XRCC4-206ENST00000542685 DESI1Q6ICB0 168 aa11.46□□□□□ -0.57
XRCC4-206ENST00000542685 KDM4CQ9H3R0 1056 aa11.46□□□□□ -0.57
XRCC4-206ENST00000542685 TOR4AQ9NXH8 423 aa11.46□□□□□ -0.57
XRCC4-206ENST00000542685 NUTM2BA6NNL0 878 aaPredicted RBP11.45□□□□□ -0.58
XRCC4-206ENST00000542685 NUTM2EB1AL46 878 aaPredicted RBP11.45□□□□□ -0.58
XRCC4-206ENST00000542685 NUTM2DQ5VT03 806 aaPredicted RBP11.45□□□□□ -0.58
XRCC4-206ENST00000542685 NUTM2AQ8IVF1 878 aaPredicted RBP11.45□□□□□ -0.58
XRCC4-206ENST00000542685 MRGPRX2Q96LB1 330 aa11.45□□□□□ -0.58
XRCC4-206ENST00000542685 POLR3EQ9NVU0 708 aa11.45□□□□□ -0.58
XRCC4-206ENST00000542685 TTC24A2A3L6 582 aaPredicted RBP11.44□□□□□ -0.58
XRCC4-206ENST00000542685 SKOR1P84550 965 aa11.44□□□□□ -0.58
XRCC4-206ENST00000542685 MYT1Q01538 1121 aa11.44□□□□□ -0.58
XRCC4-206ENST00000542685 QPCTQ16769 361 aa11.44□□□□□ -0.58
XRCC4-206ENST00000542685 TSC1Q92574 1164 aa11.44□□□□□ -0.58
XRCC4-206ENST00000542685 RSPH6AQ9H0K4 717 aa11.44□□□□□ -0.58
XRCC4-206ENST00000542685 EVA1BQ9NVM1 165 aa11.44□□□□□ -0.58
XRCC4-206ENST00000542685 RC3H1Q5TC82 1133 aaKnown RBP11.43□□□□□ -0.58
XRCC4-206ENST00000542685 CLK2P49760 499 aaKnown RBP11.42□□□□□ -0.58
XRCC4-206ENST00000542685 WNT7BP56706 349 aa11.42□□□□□ -0.58
XRCC4-206ENST00000542685 FAM117AQ9C073 453 aa11.42□□□□□ -0.58
XRCC4-206ENST00000542685 UNC93B1Q9H1C4 597 aa11.42□□□□□ -0.58
XRCC4-206ENST00000542685 KCNH2Q12809 1159 aa11.41□□□□□ -0.58
XRCC4-206ENST00000542685 LYPD8Q6UX82 237 aa11.41□□□□□ -0.58
XRCC4-206ENST00000542685 SNIP1Q8TAD8 396 aaKnown RBP11.41□□□□□ -0.58
XRCC4-206ENST00000542685 CTHP32929 405 aa11.4□□□□□ -0.58
XRCC4-206ENST00000542685 LILRB3O75022 631 aa11.39□□□□□ -0.59
XRCC4-206ENST00000542685 TUSC1Q2TAM9 212 aa11.39□□□□□ -0.59
XRCC4-206ENST00000542685 LINC01559Q495D7 138 aa11.39□□□□□ -0.59
XRCC4-206ENST00000542685 ST8SIA5O15466 376 aa11.38□□□□□ -0.59
XRCC4-206ENST00000542685 RTL5Q5HYW3 569 aaPredicted RBP11.38□□□□□ -0.59
XRCC4-206ENST00000542685 BAP1Q92560 729 aa11.38□□□□□ -0.59
XRCC4-206ENST00000542685 DDRGK1Q96HY6 314 aa11.38□□□□□ -0.59
XRCC4-206ENST00000542685 ATP1B4Q9UN42 357 aaPredicted RBP11.38□□□□□ -0.59
XRCC4-206ENST00000542685 SH3BP2P78314 561 aa11.37□□□□□ -0.59
XRCC4-206ENST00000542685 J3QL48 77 aa11.36□□□□□ -0.59
XRCC4-206ENST00000542685 PER1O15534 1290 aaPredicted RBP11.36□□□□□ -0.59
XRCC4-206ENST00000542685 ZNF787Q6DD87 383 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms