RNA–Protein interactions for RNA: ENST00000542669.1

PACRG-206, Transcript of parkin coregulated, humanhuman

TSL 4

Gene PACRG, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACRG-206ENST00000542669 SIRT1Q96EB6 747 aa9.27□□□□□ -0.93
PACRG-206ENST00000542669 BCANQ96GW7 911 aa9.27□□□□□ -0.93
PACRG-206ENST00000542669 PUS7Q96PZ0 661 aaKnown RBP9.27□□□□□ -0.93
PACRG-206ENST00000542669 FAM135BQ49AJ0 1406 aa9.27□□□□□ -0.93
PACRG-206ENST00000542669 EVC2Q86UK5 1308 aa9.27□□□□□ -0.93
PACRG-206ENST00000542669 PANK3Q9H999 370 aa9.26□□□□□ -0.93
PACRG-206ENST00000542669 POGKQ9P215 609 aa9.26□□□□□ -0.93
PACRG-206ENST00000542669 TBX22Q9Y458 520 aa9.26□□□□□ -0.93
PACRG-206ENST00000542669 PLEKHH1Q9ULM0 1364 aa9.25□□□□□ -0.93
PACRG-206ENST00000542669 PTPRUQ92729 1446 aa9.25□□□□□ -0.93
PACRG-206ENST00000542669 SAFB2Q14151 953 aaKnown RBP eCLIP9.25□□□□□ -0.93
PACRG-206ENST00000542669 ANKLE2Q86XL3 938 aa9.25□□□□□ -0.93
PACRG-206ENST00000542669 SLC26A8Q96RN1 970 aa9.25□□□□□ -0.93
PACRG-206ENST00000542669 XRN1Q8IZH2 1706 aaKnown RBP9.25□□□□□ -0.93
PACRG-206ENST00000542669 ROBO2Q9HCK4 1378 aa9.24□□□□□ -0.93
PACRG-206ENST00000542669 HOXD11P31277 338 aaPredicted RBP9.24□□□□□ -0.93
PACRG-206ENST00000542669 WAPLQ7Z5K2 1190 aa9.24□□□□□ -0.93
PACRG-206ENST00000542669 MINK1Q8N4C8 1332 aaPredicted RBP9.24□□□□□ -0.93
PACRG-206ENST00000542669 KTN1Q86UP2 1357 aaKnown RBP9.24□□□□□ -0.93
PACRG-206ENST00000542669 PIK3R4Q99570 1358 aa9.24□□□□□ -0.93
PACRG-206ENST00000542669 PTCH1Q13635 1447 aa9.23□□□□□ -0.93
PACRG-206ENST00000542669 KDM4FA0A1W2PPD8 638 aa9.23□□□□□ -0.93
PACRG-206ENST00000542669 ADGRB2O60241 1585 aa9.23□□□□□ -0.93
PACRG-206ENST00000542669 PARD3Q8TEW0 1356 aa9.23□□□□□ -0.93
PACRG-206ENST00000542669 CABP2Q9NPB3 220 aa9.22□□□□□ -0.93
PACRG-206ENST00000542669 ATAD2Q6PL18 1390 aa9.22□□□□□ -0.93
PACRG-206ENST00000542669 NPC1L1Q9UHC9 1359 aa9.22□□□□□ -0.93
PACRG-206ENST00000542669 NINLQ9Y2I6 1382 aa9.22□□□□□ -0.93
PACRG-206ENST00000542669 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.22□□□□□ -0.93
PACRG-206ENST00000542669 NPHP4O75161 1426 aaPredicted RBP9.22□□□□□ -0.93
PACRG-206ENST00000542669 CHD2O14647 1828 aaKnown RBP9.21□□□□□ -0.93
PACRG-206ENST00000542669 RALBP1Q15311 655 aa9.21□□□□□ -0.94
PACRG-206ENST00000542669 AMER1Q5JTC6 1135 aaPredicted RBP9.21□□□□□ -0.94
PACRG-206ENST00000542669 CDK19Q9BWU1 502 aa9.21□□□□□ -0.94
PACRG-206ENST00000542669 AMOTL2Q9Y2J4 779 aa9.21□□□□□ -0.94
PACRG-206ENST00000542669 USP32Q8NFA0 1604 aa9.2□□□□□ -0.94
PACRG-206ENST00000542669 SRPK2P78362 688 aaKnown RBP9.2□□□□□ -0.94
PACRG-206ENST00000542669 CARD14Q9BXL6 1004 aa9.2□□□□□ -0.94
PACRG-206ENST00000542669 SLC12A5Q9H2X9 1139 aa9.2□□□□□ -0.94
PACRG-206ENST00000542669 KNSTRNQ9Y448 316 aa9.2□□□□□ -0.94
PACRG-206ENST00000542669 ANKRD36BQ8N2N9 1353 aa9.2□□□□□ -0.94
PACRG-206ENST00000542669 WASLO00401 505 aaPredicted RBP9.19□□□□□ -0.94
PACRG-206ENST00000542669 CCDC184Q52MB2 194 aa9.19□□□□□ -0.94
PACRG-206ENST00000542669 TMC1Q8TDI8 760 aa9.19□□□□□ -0.94
PACRG-206ENST00000542669 YTHDC1Q96MU7 727 aaKnown RBP9.19□□□□□ -0.94
PACRG-206ENST00000542669 CNGB1Q14028 1251 aaPredicted RBP9.18□□□□□ -0.94
PACRG-206ENST00000542669 CC2D1BQ5T0F9 858 aaKnown RBP9.18□□□□□ -0.94
PACRG-206ENST00000542669 LMTK3Q96Q04 1460 aa9.18□□□□□ -0.94
PACRG-206ENST00000542669 MYBBP1AQ9BQG0 1328 aaKnown RBP9.18□□□□□ -0.94
PACRG-206ENST00000542669 NSD3Q9BZ95 1437 aa9.18□□□□□ -0.94
PACRG-206ENST00000542669 NCKAP5LQ9HCH0 1330 aa9.18□□□□□ -0.94
PACRG-206ENST00000542669 CD163L1Q9NR16 1453 aa9.18□□□□□ -0.94
PACRG-206ENST00000542669 NWD1Q149M9 1564 aa9.17□□□□□ -0.94
PACRG-206ENST00000542669 ATP7BP35670 1465 aa9.17□□□□□ -0.94
PACRG-206ENST00000542669 A0A1W2PP64 1363 aa9.17□□□□□ -0.94
PACRG-206ENST00000542669 BRD4O60885 1362 aaPredicted RBP9.17□□□□□ -0.94
PACRG-206ENST00000542669 KCNA6P17658 529 aa9.17□□□□□ -0.94
PACRG-206ENST00000542669 MRS2Q9HD23 443 aa9.17□□□□□ -0.94
PACRG-206ENST00000542669 TOPAZ1Q8N9V7 1692 aa9.16□□□□□ -0.94
PACRG-206ENST00000542669 NLRP13Q86W25 1043 aa9.15□□□□□ -0.94
PACRG-206ENST00000542669 NUDT16Q96DE0 195 aaKnown RBP9.15□□□□□ -0.94
PACRG-206ENST00000542669 TERF2IPQ9NYB0 399 aa9.15□□□□□ -0.94
PACRG-206ENST00000542669 CABP1Q9NZU7 370 aa9.15□□□□□ -0.94
PACRG-206ENST00000542669 CDC42BPGQ6DT37 1551 aa9.15□□□□□ -0.95
PACRG-206ENST00000542669 CPSF1Q10570 1443 aaKnown RBP9.14□□□□□ -0.95
PACRG-206ENST00000542669 PPIP5K1Q6PFW1 1433 aa9.14□□□□□ -0.95
PACRG-206ENST00000542669 NALCNQ8IZF0 1738 aa9.14□□□□□ -0.95
PACRG-206ENST00000542669 NSD2O96028 1365 aa9.14□□□□□ -0.95
PACRG-206ENST00000542669 CGNL1Q0VF96 1302 aa9.14□□□□□ -0.95
PACRG-206ENST00000542669 PRR36Q9H6K5 1346 aa9.14□□□□□ -0.95
PACRG-206ENST00000542669 CCDC61Q9Y6R9 512 aa9.14□□□□□ -0.95
PACRG-206ENST00000542669 AKAP12Q02952 1782 aa9.14□□□□□ -0.95
PACRG-206ENST00000542669 CENPBP07199 599 aaPredicted RBP9.13□□□□□ -0.95
PACRG-206ENST00000542669 HSPA2P54652 639 aa9.13□□□□□ -0.95
PACRG-206ENST00000542669 HDGFL2Q7Z4V5 671 aaPredicted RBP9.13□□□□□ -0.95
PACRG-206ENST00000542669 STRCQ7RTU9 1775 aa9.13□□□□□ -0.95
PACRG-206ENST00000542669 ITSN1Q15811 1721 aa9.13□□□□□ -0.95
PACRG-206ENST00000542669 MON2Q7Z3U7 1717 aa9.13□□□□□ -0.95
PACRG-206ENST00000542669 FMN2Q9NZ56 1722 aa9.13□□□□□ -0.95
PACRG-206ENST00000542669 NKTRP30414 1462 aaKnown RBP9.13□□□□□ -0.95
PACRG-206ENST00000542669 ANKRD26Q9UPS8 1709 aa9.12□□□□□ -0.95
PACRG-206ENST00000542669 PPP2R1AP30153 589 aa9.12□□□□□ -0.95
PACRG-206ENST00000542669 PNISRQ8TF01 805 aaKnown RBP9.12□□□□□ -0.95
PACRG-206ENST00000542669 ANKARQ7Z5J8 1434 aa9.12□□□□□ -0.95
PACRG-206ENST00000542669 ADGRL3Q9HAR2 1447 aa9.12□□□□□ -0.95
PACRG-206ENST00000542669 KIF20BQ96Q89 1820 aa9.12□□□□□ -0.95
PACRG-206ENST00000542669 PLEKHG3A1L390 1219 aa9.11□□□□□ -0.95
PACRG-206ENST00000542669 EDC4Q6P2E9 1401 aaKnown RBP9.11□□□□□ -0.95
PACRG-206ENST00000542669 STRCP1A6NGW2 1772 aa9.11□□□□□ -0.95
PACRG-206ENST00000542669 RGPD8O14715 1765 aaPredicted RBP9.1□□□□□ -0.95
PACRG-206ENST00000542669 MORC1Q86VD1 984 aa9.1□□□□□ -0.95
PACRG-206ENST00000542669 FAM9BQ8IZU0 186 aa9.1□□□□□ -0.95
PACRG-206ENST00000542669 NRKQ7Z2Y5 1582 aa9.1□□□□□ -0.95
PACRG-206ENST00000542669 FYB1O15117 783 aa9.09□□□□□ -0.95
PACRG-206ENST00000542669 POLR3AO14802 1390 aaPredicted RBP9.09□□□□□ -0.95
PACRG-206ENST00000542669 NUTM2FA1L443 756 aa9.08□□□□□ -0.96
PACRG-206ENST00000542669 ZNF692Q9BU19 519 aaPredicted RBP9.08□□□□□ -0.96
PACRG-206ENST00000542669 INSRP06213 1382 aa9.08□□□□□ -0.96
PACRG-206ENST00000542669 ACEP12821 1306 aa9.07□□□□□ -0.96
PACRG-206ENST00000542669 USP6P35125 1406 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms