RNA–Protein interactions for RNA: ENST00000542557.5

PTPRO-208, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRO, Length 2,946 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-208ENST00000542557 SHPRHQ149N8 1683 aa8.63□□□□□ -1.03
PTPRO-208ENST00000542557 NSD3Q9BZ95 1437 aa8.63□□□□□ -1.03
PTPRO-208ENST00000542557 DUSP27Q5VZP5 1158 aa8.63□□□□□ -1.03
PTPRO-208ENST00000542557 TMEM131LA2VDJ0 1609 aa8.63□□□□□ -1.03
PTPRO-208ENST00000542557 YEATS2Q9ULM3 1422 aa8.63□□□□□ -1.03
PTPRO-208ENST00000542557 VGFO15240 615 aaPredicted RBP8.63□□□□□ -1.03
PTPRO-208ENST00000542557 GOLGA2Q08379 1002 aa8.63□□□□□ -1.03
PTPRO-208ENST00000542557 FBXO3Q9UK99 471 aa8.63□□□□□ -1.03
PTPRO-208ENST00000542557 TMEM132AQ24JP5 1023 aa8.62□□□□□ -1.03
PTPRO-208ENST00000542557 SLC52A1Q9NWF4 448 aa8.62□□□□□ -1.03
PTPRO-208ENST00000542557 TRMT2AQ8IZ69 625 aaKnown RBP8.62□□□□□ -1.03
PTPRO-208ENST00000542557 TRAK1Q9UPV9 953 aa8.62□□□□□ -1.03
PTPRO-208ENST00000542557 NSD2O96028 1365 aa8.62□□□□□ -1.03
PTPRO-208ENST00000542557 DIP2BQ9P265 1576 aa8.61□□□□□ -1.03
PTPRO-208ENST00000542557 NINLQ9Y2I6 1382 aa8.61□□□□□ -1.03
PTPRO-208ENST00000542557 TCERG1O14776 1098 aaKnown RBP8.61□□□□□ -1.03
PTPRO-208ENST00000542557 SLFN5Q08AF3 891 aa8.61□□□□□ -1.03
PTPRO-208ENST00000542557 NKTRP30414 1462 aaKnown RBP8.61□□□□□ -1.03
PTPRO-208ENST00000542557 ANKRD36BQ8N2N9 1353 aa8.61□□□□□ -1.03
PTPRO-208ENST00000542557 AGLP35573 1532 aa8.6□□□□□ -1.03
PTPRO-208ENST00000542557 CLTCQ00610 1675 aaKnown RBP8.6□□□□□ -1.03
PTPRO-208ENST00000542557 MYO5BQ9ULV0 1848 aa8.6□□□□□ -1.03
PTPRO-208ENST00000542557 EVC2Q86UK5 1308 aa8.6□□□□□ -1.03
PTPRO-208ENST00000542557 MS4A1P11836 297 aa8.6□□□□□ -1.03
PTPRO-208ENST00000542557 NPM2Q86SE8 214 aaKnown RBP8.6□□□□□ -1.03
PTPRO-208ENST00000542557 IQSEC2Q5JU85 1478 aa8.59□□□□□ -1.03
PTPRO-208ENST00000542557 TMEM132EQ6IEE7 984 aa8.59□□□□□ -1.03
PTPRO-208ENST00000542557 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.59□□□□□ -1.03
PTPRO-208ENST00000542557 CRBNQ96SW2 442 aa8.59□□□□□ -1.03
PTPRO-208ENST00000542557 E9PSI1 815 aa8.59□□□□□ -1.03
PTPRO-208ENST00000542557 CGNL1Q0VF96 1302 aa8.59□□□□□ -1.03
PTPRO-208ENST00000542557 PLIN1O60240 522 aa8.58□□□□□ -1.04
PTPRO-208ENST00000542557 IDI1Q13907 227 aa8.58□□□□□ -1.04
PTPRO-208ENST00000542557 PTPRMP28827 1452 aa8.58□□□□□ -1.04
PTPRO-208ENST00000542557 APAF1O14727 1248 aa8.58□□□□□ -1.04
PTPRO-208ENST00000542557 MORC1Q86VD1 984 aa8.58□□□□□ -1.04
PTPRO-208ENST00000542557 SLC12A5Q9H2X9 1139 aa8.58□□□□□ -1.04
PTPRO-208ENST00000542557 RIMBP3CA6NJZ7 1639 aa8.58□□□□□ -1.04
PTPRO-208ENST00000542557 RIMBP3BA6NNM3 1639 aa8.58□□□□□ -1.04
PTPRO-208ENST00000542557 RIMBP3Q9UFD9 1639 aa8.58□□□□□ -1.04
PTPRO-208ENST00000542557 CCDC146Q8IYE0 955 aa8.57□□□□□ -1.04
PTPRO-208ENST00000542557 ANKRD26Q9UPS8 1709 aa8.57□□□□□ -1.04
PTPRO-208ENST00000542557 ANP32AP39687 249 aaKnown RBP8.57□□□□□ -1.04
PTPRO-208ENST00000542557 KDM2BQ8NHM5 1336 aa8.56□□□□□ -1.04
PTPRO-208ENST00000542557 ABCC11Q96J66 1382 aa8.56□□□□□ -1.04
PTPRO-208ENST00000542557 MED14O60244 1454 aa8.56□□□□□ -1.04
PTPRO-208ENST00000542557 ADGRB2O60241 1585 aa8.56□□□□□ -1.04
PTPRO-208ENST00000542557 SPATA31D1Q6ZQQ2 1576 aa8.56□□□□□ -1.04
PTPRO-208ENST00000542557 ATAD2Q6PL18 1390 aa8.56□□□□□ -1.04
PTPRO-208ENST00000542557 ZBTB22O15209 634 aa8.56□□□□□ -1.04
PTPRO-208ENST00000542557 ALKQ9UM73 1620 aa8.55□□□□□ -1.04
PTPRO-208ENST00000542557 YTHDC2Q9H6S0 1430 aaKnown RBP8.55□□□□□ -1.04
PTPRO-208ENST00000542557 C20orf194Q5TEA3 1177 aa8.55□□□□□ -1.04
PTPRO-208ENST00000542557 DLC1Q96QB1 1528 aa8.55□□□□□ -1.04
PTPRO-208ENST00000542557 CENPQQ7L2Z9 268 aaPredicted RBP8.54□□□□□ -1.04
PTPRO-208ENST00000542557 RUNDC1Q96C34 613 aa8.54□□□□□ -1.04
PTPRO-208ENST00000542557 CFAP53Q96M91 514 aa8.54□□□□□ -1.04
PTPRO-208ENST00000542557 SPINK5Q9NQ38 1064 aaPredicted RBP8.54□□□□□ -1.04
PTPRO-208ENST00000542557 NOP58Q9Y2X3 529 aaKnown RBP8.54□□□□□ -1.04
PTPRO-208ENST00000542557 IPO9Q96P70 1041 aaKnown RBP8.54□□□□□ -1.04
PTPRO-208ENST00000542557 SETD1AO15047 1707 aaKnown RBP8.54□□□□□ -1.04
PTPRO-208ENST00000542557 A0A1W2PP64 1363 aa8.54□□□□□ -1.04
PTPRO-208ENST00000542557 ARHGEF40Q8TER5 1519 aa8.54□□□□□ -1.04
PTPRO-208ENST00000542557 CCDC27Q2M243 656 aa8.53□□□□□ -1.04
PTPRO-208ENST00000542557 WWC1Q8IX03 1113 aa8.53□□□□□ -1.04
PTPRO-208ENST00000542557 BACH2Q9BYV9 841 aa8.53□□□□□ -1.04
PTPRO-208ENST00000542557 PDE4AP27815 886 aa8.53□□□□□ -1.04
PTPRO-208ENST00000542557 NUTM2DQ5VT03 806 aaPredicted RBP8.53□□□□□ -1.04
PTPRO-208ENST00000542557 NLRP1Q9C000 1473 aa8.53□□□□□ -1.04
PTPRO-208ENST00000542557 CD163L1Q9NR16 1453 aa8.53□□□□□ -1.04
PTPRO-208ENST00000542557 CYB5RLQ6IPT4 315 aa8.53□□□□□ -1.04
PTPRO-208ENST00000542557 A2ML1A8K2U0 1454 aa8.52□□□□□ -1.05
PTPRO-208ENST00000542557 COL3A1P02461 1466 aaPredicted RBP8.52□□□□□ -1.05
PTPRO-208ENST00000542557 MTHFSP49914 203 aa8.52□□□□□ -1.05
PTPRO-208ENST00000542557 FAM69CQ0P6D2 419 aa8.52□□□□□ -1.05
PTPRO-208ENST00000542557 CABP2Q9NPB3 220 aa8.52□□□□□ -1.05
PTPRO-208ENST00000542557 WDR63Q8IWG1 891 aa8.52□□□□□ -1.05
PTPRO-208ENST00000542557 DMRT2Q9Y5R5 561 aa8.52□□□□□ -1.05
PTPRO-208ENST00000542557 TSPOAP1O95153 1857 aa8.52□□□□□ -1.05
PTPRO-208ENST00000542557 KIF20BQ96Q89 1820 aa8.51□□□□□ -1.05
PTPRO-208ENST00000542557 PDE3AQ14432 1141 aa8.51□□□□□ -1.05
PTPRO-208ENST00000542557 TCP11L2Q8N4U5 519 aa8.5□□□□□ -1.05
PTPRO-208ENST00000542557 CDC42BPGQ6DT37 1551 aa8.5□□□□□ -1.05
PTPRO-208ENST00000542557 ATP7BP35670 1465 aa8.5□□□□□ -1.05
PTPRO-208ENST00000542557 TNNT2P45379 298 aaPredicted RBP8.5□□□□□ -1.05
PTPRO-208ENST00000542557 PRAM1Q96QH2 718 aa8.5□□□□□ -1.05
PTPRO-208ENST00000542557 TERF2IPQ9NYB0 399 aa8.5□□□□□ -1.05
PTPRO-208ENST00000542557 SRPK2P78362 688 aaKnown RBP8.5□□□□□ -1.05
PTPRO-208ENST00000542557 FBXO31Q5XUX0 539 aaPredicted RBP8.5□□□□□ -1.05
PTPRO-208ENST00000542557 C14orf37Q86TY3 774 aa8.5□□□□□ -1.05
PTPRO-208ENST00000542557 KNDC1Q76NI1 1749 aa8.49□□□□□ -1.05
PTPRO-208ENST00000542557 BCAR3O75815 825 aa8.49□□□□□ -1.05
PTPRO-208ENST00000542557 STK26Q9P289 416 aa8.49□□□□□ -1.05
PTPRO-208ENST00000542557 RIMS2Q9UQ26 1411 aa8.49□□□□□ -1.05
PTPRO-208ENST00000542557 NRXN3Q9Y4C0 1643 aa8.49□□□□□ -1.05
PTPRO-208ENST00000542557 AAMPQ13685 434 aa8.49□□□□□ -1.05
PTPRO-208ENST00000542557 POGKQ9P215 609 aa8.48□□□□□ -1.05
PTPRO-208ENST00000542557 PAK3O75914 559 aaPredicted RBP8.48□□□□□ -1.05
PTPRO-208ENST00000542557 SAFB2Q14151 953 aaKnown RBP eCLIP8.48□□□□□ -1.05
PTPRO-208ENST00000542557 ZBTB47Q9UFB7 747 aaPredicted RBP8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms