RNA–Protein interactions for RNA: ENST00000542421.1

ZNF28-206, Transcript of zinc finger protein 28, humanhuman

TSL 3

Gene ZNF28, Length 228 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF28-206ENST00000542421 RIMS2Q9UQ26 1411 aa7.56□□□□□ -1.2
ZNF28-206ENST00000542421 ATF3P18847 181 aa7.56□□□□□ -1.2
ZNF28-206ENST00000542421 CCER1Q8TC90 406 aaPredicted RBP7.56□□□□□ -1.2
ZNF28-206ENST00000542421 NUP155O75694 1391 aa7.56□□□□□ -1.2
ZNF28-206ENST00000542421 ZFYVE9O95405 1425 aa7.55□□□□□ -1.2
ZNF28-206ENST00000542421 POTEAQ6S8J7 498 aa7.55□□□□□ -1.2
ZNF28-206ENST00000542421 AMOTL2Q9Y2J4 779 aa7.55□□□□□ -1.2
ZNF28-206ENST00000542421 SYNMO15061 1565 aa7.54□□□□□ -1.2
ZNF28-206ENST00000542421 ZEB1P37275 1124 aaPredicted RBP7.54□□□□□ -1.2
ZNF28-206ENST00000542421 C14orf37Q86TY3 774 aa7.54□□□□□ -1.2
ZNF28-206ENST00000542421 JCADQ9P266 1359 aa7.54□□□□□ -1.2
ZNF28-206ENST00000542421 NKTRP30414 1462 aaKnown RBP7.54□□□□□ -1.2
ZNF28-206ENST00000542421 KDM5AP29375 1690 aaKnown RBP7.54□□□□□ -1.2
ZNF28-206ENST00000542421 PIK3C2BO00750 1634 aa7.53□□□□□ -1.2
ZNF28-206ENST00000542421 PAK3O75914 559 aaPredicted RBP7.53□□□□□ -1.2
ZNF28-206ENST00000542421 HRCP23327 699 aa7.53□□□□□ -1.2
ZNF28-206ENST00000542421 NUTM2DQ5VT03 806 aaPredicted RBP7.53□□□□□ -1.2
ZNF28-206ENST00000542421 SPATA31A6Q5VVP1 1343 aa7.52□□□□□ -1.2
ZNF28-206ENST00000542421 STRCP1A6NGW2 1772 aa7.52□□□□□ -1.21
ZNF28-206ENST00000542421 ZNF772Q68DY9 489 aaPredicted RBP7.52□□□□□ -1.21
ZNF28-206ENST00000542421 CEP152O94986 1710 aa7.52□□□□□ -1.21
ZNF28-206ENST00000542421 ADGRB3O60242 1522 aa7.52□□□□□ -1.21
ZNF28-206ENST00000542421 ADAMTS13Q76LX8 1427 aa7.52□□□□□ -1.21
ZNF28-206ENST00000542421 RNF166Q96A37 237 aaPredicted RBP7.51□□□□□ -1.21
ZNF28-206ENST00000542421 COLQQ9Y215 455 aaPredicted RBP7.51□□□□□ -1.21
ZNF28-206ENST00000542421 POTEB3A0JP26 581 aa7.5□□□□□ -1.21
ZNF28-206ENST00000542421 VGFO15240 615 aaPredicted RBP7.5□□□□□ -1.21
ZNF28-206ENST00000542421 ZNF326Q5BKZ1 582 aaKnown RBP7.5□□□□□ -1.21
ZNF28-206ENST00000542421 POTEBQ6S5H4 581 aa7.5□□□□□ -1.21
ZNF28-206ENST00000542421 LRRC59Q96AG4 307 aaKnown RBP7.5□□□□□ -1.21
ZNF28-206ENST00000542421 SETD5Q9C0A6 1442 aa7.5□□□□□ -1.21
ZNF28-206ENST00000542421 CFAP65Q6ZU64 1925 aaKnown RBP7.49□□□□□ -1.21
ZNF28-206ENST00000542421 CROCC2H7BZ55 1655 aa7.49□□□□□ -1.21
ZNF28-206ENST00000542421 BRINP3Q76B58 766 aa7.49□□□□□ -1.21
ZNF28-206ENST00000542421 RPGRIP1LQ68CZ1 1315 aa7.49□□□□□ -1.21
ZNF28-206ENST00000542421 MEX3CQ5U5Q3 659 aaKnown RBP7.48□□□□□ -1.21
ZNF28-206ENST00000542421 ACIN1Q9UKV3 1341 aaKnown RBP7.48□□□□□ -1.21
ZNF28-206ENST00000542421 NWD1Q149M9 1564 aa7.47□□□□□ -1.21
ZNF28-206ENST00000542421 RXRBP28702 533 aa7.47□□□□□ -1.21
ZNF28-206ENST00000542421 TMEM131LA2VDJ0 1609 aa7.47□□□□□ -1.21
ZNF28-206ENST00000542421 RAB3GAP2Q9H2M9 1393 aa7.46□□□□□ -1.21
ZNF28-206ENST00000542421 DCCP43146 1447 aa7.46□□□□□ -1.21
ZNF28-206ENST00000542421 PTPRUQ92729 1446 aa7.46□□□□□ -1.21
ZNF28-206ENST00000542421 METP08581 1390 aa7.46□□□□□ -1.22
ZNF28-206ENST00000542421 NUTM2BA6NNL0 878 aaPredicted RBP7.45□□□□□ -1.22
ZNF28-206ENST00000542421 NUTM2EB1AL46 878 aaPredicted RBP7.45□□□□□ -1.22
ZNF28-206ENST00000542421 NUTM2AQ8IVF1 878 aaPredicted RBP7.45□□□□□ -1.22
ZNF28-206ENST00000542421 TRIM52Q96A61 297 aa7.45□□□□□ -1.22
ZNF28-206ENST00000542421 ROBO1Q9Y6N7 1651 aa7.44□□□□□ -1.22
ZNF28-206ENST00000542421 MKRN4PQ13434 485 aaPredicted RBP7.44□□□□□ -1.22
ZNF28-206ENST00000542421 UPF1Q92900 1129 aaKnown RBP eCLIP7.44□□□□□ -1.22
ZNF28-206ENST00000542421 SLC4A1APQ9BWU0 796 aaKnown RBP7.44□□□□□ -1.22
ZNF28-206ENST00000542421 QTRT2Q9H974 415 aaKnown RBP7.44□□□□□ -1.22
ZNF28-206ENST00000542421 CREBZFQ9NS37 354 aa7.44□□□□□ -1.22
ZNF28-206ENST00000542421 UNC13BO14795 1591 aa7.44□□□□□ -1.22
ZNF28-206ENST00000542421 DIP2AQ14689 1571 aa7.44□□□□□ -1.22
ZNF28-206ENST00000542421 HFM1A2PYH4 1435 aa7.44□□□□□ -1.22
ZNF28-206ENST00000542421 XIRP1Q702N8 1843 aaKnown RBP7.43□□□□□ -1.22
ZNF28-206ENST00000542421 TRPM2O94759 1503 aa7.43□□□□□ -1.22
ZNF28-206ENST00000542421 RBM6P78332 1123 aaKnown RBP7.43□□□□□ -1.22
ZNF28-206ENST00000542421 CLSPNQ9HAW4 1339 aa7.43□□□□□ -1.22
ZNF28-206ENST00000542421 NAIPQ13075 1403 aa7.43□□□□□ -1.22
ZNF28-206ENST00000542421 IQGAP3Q86VI3 1631 aa7.42□□□□□ -1.22
ZNF28-206ENST00000542421 EMP3P54852 163 aa7.42□□□□□ -1.22
ZNF28-206ENST00000542421 NGLY1Q96IV0 654 aa7.42□□□□□ -1.22
ZNF28-206ENST00000542421 HS3ST6Q96QI5 342 aa7.42□□□□□ -1.22
ZNF28-206ENST00000542421 CHD2O14647 1828 aaKnown RBP7.42□□□□□ -1.22
ZNF28-206ENST00000542421 AFF2P51816 1311 aa7.42□□□□□ -1.22
ZNF28-206ENST00000542421 SOS2Q07890 1332 aaPredicted RBP7.42□□□□□ -1.22
ZNF28-206ENST00000542421 DHX57Q6P158 1386 aaKnown RBP7.42□□□□□ -1.22
ZNF28-206ENST00000542421 MST1RQ04912 1400 aa7.42□□□□□ -1.22
ZNF28-206ENST00000542421 FNBP4Q8N3X1 1017 aaPredicted RBP7.41□□□□□ -1.22
ZNF28-206ENST00000542421 SIRT1Q96EB6 747 aa7.41□□□□□ -1.22
ZNF28-206ENST00000542421 ORAI2Q96SN7 254 aa7.41□□□□□ -1.22
ZNF28-206ENST00000542421 ADGRL3Q9HAR2 1447 aa7.41□□□□□ -1.22
ZNF28-206ENST00000542421 SETBP1Q9Y6X0 1596 aa7.41□□□□□ -1.22
ZNF28-206ENST00000542421 AHDC1Q5TGY3 1603 aaPredicted RBP7.41□□□□□ -1.22
ZNF28-206ENST00000542421 E9PCH4 1651 aa7.41□□□□□ -1.22
ZNF28-206ENST00000542421 SEC24BO95487 1268 aa7.4□□□□□ -1.22
ZNF28-206ENST00000542421 DDX17Q92841 729 aaKnown RBP7.4□□□□□ -1.22
ZNF28-206ENST00000542421 C8orf37Q96NL8 207 aa7.4□□□□□ -1.22
ZNF28-206ENST00000542421 BMP2KQ9NSY1 1161 aaPredicted RBP7.4□□□□□ -1.22
ZNF28-206ENST00000542421 LRP6O75581 1613 aa7.4□□□□□ -1.22
ZNF28-206ENST00000542421 GCC2Q8IWJ2 1684 aa7.4□□□□□ -1.23
ZNF28-206ENST00000542421 COL16A1Q07092 1604 aaPredicted RBP7.39□□□□□ -1.23
ZNF28-206ENST00000542421 C1orf167Q5SNV9 1468 aa7.39□□□□□ -1.23
ZNF28-206ENST00000542421 CDK12Q9NYV4 1490 aaPredicted RBP7.39□□□□□ -1.23
ZNF28-206ENST00000542421 ROBO2Q9HCK4 1378 aa7.39□□□□□ -1.23
ZNF28-206ENST00000542421 ADAMTS2O95450 1211 aa7.39□□□□□ -1.23
ZNF28-206ENST00000542421 ESCO1Q5FWF5 840 aa7.39□□□□□ -1.23
ZNF28-206ENST00000542421 MPHOSPH9Q99550 1183 aa7.39□□□□□ -1.23
ZNF28-206ENST00000542421 PRAG1Q86YV5 1406 aa7.38□□□□□ -1.23
ZNF28-206ENST00000542421 PNPLA6Q8IY17 1366 aa7.38□□□□□ -1.23
ZNF28-206ENST00000542421 NPHP3Q7Z494 1330 aa7.38□□□□□ -1.23
ZNF28-206ENST00000542421 RGL3Q3MIN7 710 aa7.38□□□□□ -1.23
ZNF28-206ENST00000542421 USP21Q9UK80 565 aa7.38□□□□□ -1.23
ZNF28-206ENST00000542421 TRPC5Q9UL62 973 aaPredicted RBP7.38□□□□□ -1.23
ZNF28-206ENST00000542421 PHLPP1O60346 1717 aa7.38□□□□□ -1.23
ZNF28-206ENST00000542421 SIPA1L2Q9P2F8 1722 aaPredicted RBP7.38□□□□□ -1.23
ZNF28-206ENST00000542421 ASXL1Q8IXJ9 1541 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms