RNA–Protein interactions for RNA: ENST00000542338.1

NPIPB4-216, Transcript of nuclear pore complex interacting protein family member B4, humanhuman

TSL 3

Gene NPIPB4, Length 387 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4-216ENST00000542338 YTHDC2Q9H6S0 1430 aaKnown RBP13.11□□□□□ -0.31
NPIPB4-216ENST00000542338 TMEM94Q12767 1356 aa13.1□□□□□ -0.31
NPIPB4-216ENST00000542338 TMF1P82094 1093 aa13.1□□□□□ -0.31
NPIPB4-216ENST00000542338 PROSER2Q86WR7 435 aaPredicted RBP13.09□□□□□ -0.31
NPIPB4-216ENST00000542338 POGKQ9P215 609 aa13.09□□□□□ -0.31
NPIPB4-216ENST00000542338 STK26Q9P289 416 aa13.09□□□□□ -0.31
NPIPB4-216ENST00000542338 CENPJQ9HC77 1338 aaPredicted RBP13.09□□□□□ -0.31
NPIPB4-216ENST00000542338 MSH6P52701 1360 aa13.08□□□□□ -0.31
NPIPB4-216ENST00000542338 NCOA3Q9Y6Q9 1424 aa13.08□□□□□ -0.32
NPIPB4-216ENST00000542338 HIRIP3Q9BW71 556 aaPredicted RBP13.08□□□□□ -0.32
NPIPB4-216ENST00000542338 ROBO1Q9Y6N7 1651 aa13.08□□□□□ -0.32
NPIPB4-216ENST00000542338 METP08581 1390 aa13.07□□□□□ -0.32
NPIPB4-216ENST00000542338 SBNO2Q9Y2G9 1366 aa13.07□□□□□ -0.32
NPIPB4-216ENST00000542338 NRXN3Q9Y4C0 1643 aa13.07□□□□□ -0.32
NPIPB4-216ENST00000542338 TESK2Q96S53 571 aa13.06□□□□□ -0.32
NPIPB4-216ENST00000542338 DLC1Q96QB1 1528 aa13.06□□□□□ -0.32
NPIPB4-216ENST00000542338 TECPR2O15040 1411 aa13.05□□□□□ -0.32
NPIPB4-216ENST00000542338 FAM135BQ49AJ0 1406 aa13.05□□□□□ -0.32
NPIPB4-216ENST00000542338 DCAF8L1A6NGE4 600 aa13.05□□□□□ -0.32
NPIPB4-216ENST00000542338 PUS7Q96PZ0 661 aaKnown RBP13.05□□□□□ -0.32
NPIPB4-216ENST00000542338 AMOTL2Q9Y2J4 779 aa13.05□□□□□ -0.32
NPIPB4-216ENST00000542338 ASXL1Q8IXJ9 1541 aa13.04□□□□□ -0.32
NPIPB4-216ENST00000542338 PRAM1Q96QH2 718 aa13.04□□□□□ -0.32
NPIPB4-216ENST00000542338 XRN1Q8IZH2 1706 aaKnown RBP13.04□□□□□ -0.32
NPIPB4-216ENST00000542338 SETD1AO15047 1707 aaKnown RBP13.03□□□□□ -0.32
NPIPB4-216ENST00000542338 EVC2Q86UK5 1308 aa13.03□□□□□ -0.32
NPIPB4-216ENST00000542338 C14orf37Q86TY3 774 aa13.02□□□□□ -0.33
NPIPB4-216ENST00000542338 CCDC7Q96M83 1385 aa13.02□□□□□ -0.33
NPIPB4-216ENST00000542338 PHLPP1O60346 1717 aa13.02□□□□□ -0.33
NPIPB4-216ENST00000542338 RBM33Q96EV2 1170 aaKnown RBP13.01□□□□□ -0.33
NPIPB4-216ENST00000542338 KIF7Q2M1P5 1343 aa13.01□□□□□ -0.33
NPIPB4-216ENST00000542338 WASHC2AQ641Q2 1341 aa13.01□□□□□ -0.33
NPIPB4-216ENST00000542338 DCCP43146 1447 aa13.01□□□□□ -0.33
NPIPB4-216ENST00000542338 PTCH1Q13635 1447 aa13□□□□□ -0.33
NPIPB4-216ENST00000542338 KNDC1Q76NI1 1749 aa12.99□□□□□ -0.33
NPIPB4-216ENST00000542338 PTPRUQ92729 1446 aa12.99□□□□□ -0.33
NPIPB4-216ENST00000542338 C11orf95C9JLR9 678 aaPredicted RBP12.99□□□□□ -0.33
NPIPB4-216ENST00000542338 WAPLQ7Z5K2 1190 aa12.99□□□□□ -0.33
NPIPB4-216ENST00000542338 CADPS2Q86UW7 1296 aa12.99□□□□□ -0.33
NPIPB4-216ENST00000542338 ARHGEF28Q8N1W1 1705 aaKnown RBP12.99□□□□□ -0.33
NPIPB4-216ENST00000542338 DIEXFQ68CQ4 756 aaKnown RBP12.98□□□□□ -0.33
NPIPB4-216ENST00000542338 POLR3GLQ9BT43 218 aa12.98□□□□□ -0.33
NPIPB4-216ENST00000542338 C19orf44Q9H6X5 657 aa12.98□□□□□ -0.33
NPIPB4-216ENST00000542338 ROBO2Q9HCK4 1378 aa12.97□□□□□ -0.33
NPIPB4-216ENST00000542338 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.97□□□□□ -0.33
NPIPB4-216ENST00000542338 NPM3O75607 178 aaKnown RBP12.97□□□□□ -0.33
NPIPB4-216ENST00000542338 ATF3P18847 181 aa12.97□□□□□ -0.33
NPIPB4-216ENST00000542338 DDX10Q13206 875 aaKnown RBP12.97□□□□□ -0.33
NPIPB4-216ENST00000542338 SAFB2Q14151 953 aaKnown RBP eCLIP12.97□□□□□ -0.33
NPIPB4-216ENST00000542338 MINK1Q8N4C8 1332 aaPredicted RBP12.96□□□□□ -0.33
NPIPB4-216ENST00000542338 SLAIN2Q9P270 581 aa12.96□□□□□ -0.33
NPIPB4-216ENST00000542338 QRICH2Q9H0J4 1663 aa12.96□□□□□ -0.34
NPIPB4-216ENST00000542338 WASLO00401 505 aaPredicted RBP12.95□□□□□ -0.34
NPIPB4-216ENST00000542338 SRPK2P78362 688 aaKnown RBP12.95□□□□□ -0.34
NPIPB4-216ENST00000542338 ADGRL3Q9HAR2 1447 aa12.95□□□□□ -0.34
NPIPB4-216ENST00000542338 ATAD2Q6PL18 1390 aa12.94□□□□□ -0.34
NPIPB4-216ENST00000542338 NINLQ9Y2I6 1382 aa12.94□□□□□ -0.34
NPIPB4-216ENST00000542338 CDK19Q9BWU1 502 aa12.94□□□□□ -0.34
NPIPB4-216ENST00000542338 COL16A1Q07092 1604 aaPredicted RBP12.94□□□□□ -0.34
NPIPB4-216ENST00000542338 PLEKHH1Q9ULM0 1364 aa12.94□□□□□ -0.34
NPIPB4-216ENST00000542338 RNF216Q9NWF9 866 aaPredicted RBP12.93□□□□□ -0.34
NPIPB4-216ENST00000542338 JCADQ9P266 1359 aa12.93□□□□□ -0.34
NPIPB4-216ENST00000542338 NALCNQ8IZF0 1738 aa12.92□□□□□ -0.34
NPIPB4-216ENST00000542338 RGS17Q9UGC6 210 aaPredicted RBP12.92□□□□□ -0.34
NPIPB4-216ENST00000542338 AHDC1Q5TGY3 1603 aaPredicted RBP12.91□□□□□ -0.34
NPIPB4-216ENST00000542338 HOXD11P31277 338 aaPredicted RBP12.9□□□□□ -0.34
NPIPB4-216ENST00000542338 TMC1Q8TDI8 760 aa12.9□□□□□ -0.34
NPIPB4-216ENST00000542338 CABP2Q9NPB3 220 aa12.9□□□□□ -0.34
NPIPB4-216ENST00000542338 ADGRB2O60241 1585 aa12.9□□□□□ -0.35
NPIPB4-216ENST00000542338 SHPRHQ149N8 1683 aa12.89□□□□□ -0.35
NPIPB4-216ENST00000542338 MST1RQ04912 1400 aa12.89□□□□□ -0.35
NPIPB4-216ENST00000542338 TULP4Q9NRJ4 1543 aa12.89□□□□□ -0.35
NPIPB4-216ENST00000542338 TERF2IPQ9NYB0 399 aa12.89□□□□□ -0.35
NPIPB4-216ENST00000542338 CCDC61Q9Y6R9 512 aa12.89□□□□□ -0.35
NPIPB4-216ENST00000542338 NUDT16Q96DE0 195 aaKnown RBP12.88□□□□□ -0.35
NPIPB4-216ENST00000542338 PANK3Q9H999 370 aa12.88□□□□□ -0.35
NPIPB4-216ENST00000542338 CDC42BPGQ6DT37 1551 aa12.88□□□□□ -0.35
NPIPB4-216ENST00000542338 ANP32CO43423 234 aa12.87□□□□□ -0.35
NPIPB4-216ENST00000542338 POTEAQ6S8J7 498 aa12.87□□□□□ -0.35
NPIPB4-216ENST00000542338 HDGFL2Q7Z4V5 671 aaPredicted RBP12.87□□□□□ -0.35
NPIPB4-216ENST00000542338 ZNF692Q9BU19 519 aaPredicted RBP12.87□□□□□ -0.35
NPIPB4-216ENST00000542338 KNSTRNQ9Y448 316 aa12.87□□□□□ -0.35
NPIPB4-216ENST00000542338 BRINP3Q76B58 766 aa12.86□□□□□ -0.35
NPIPB4-216ENST00000542338 SLC12A5Q9H2X9 1139 aa12.86□□□□□ -0.35
NPIPB4-216ENST00000542338 NHSL1Q5SYE7 1610 aa12.86□□□□□ -0.35
NPIPB4-216ENST00000542338 ANKARQ7Z5J8 1434 aa12.86□□□□□ -0.35
NPIPB4-216ENST00000542338 SPATA31A6Q5VVP1 1343 aa12.86□□□□□ -0.35
NPIPB4-216ENST00000542338 LRP6O75581 1613 aa12.85□□□□□ -0.35
NPIPB4-216ENST00000542338 MEX3CQ5U5Q3 659 aaKnown RBP12.85□□□□□ -0.35
NPIPB4-216ENST00000542338 CABP1Q9NZU7 370 aa12.85□□□□□ -0.35
NPIPB4-216ENST00000542338 ANKRD36BQ8N2N9 1353 aa12.84□□□□□ -0.35
NPIPB4-216ENST00000542338 PLEKHG3A1L390 1219 aa12.84□□□□□ -0.35
NPIPB4-216ENST00000542338 C1orf167Q5SNV9 1468 aa12.84□□□□□ -0.35
NPIPB4-216ENST00000542338 KTN1Q86UP2 1357 aaKnown RBP12.83□□□□□ -0.36
NPIPB4-216ENST00000542338 PER1O15534 1290 aaPredicted RBP12.83□□□□□ -0.36
NPIPB4-216ENST00000542338 PPIP5K1Q6PFW1 1433 aa12.82□□□□□ -0.36
NPIPB4-216ENST00000542338 ATP7BP35670 1465 aa12.82□□□□□ -0.36
NPIPB4-216ENST00000542338 NPC1L1Q9UHC9 1359 aa12.81□□□□□ -0.36
NPIPB4-216ENST00000542338 RALBP1Q15311 655 aa12.8□□□□□ -0.36
NPIPB4-216ENST00000542338 CGNL1Q0VF96 1302 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms