RNA–Protein interactions for RNA: ENST00000542277.5

PTPN6-216, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 3

Gene PTPN6, Length 664 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-216ENST00000542277 FOXO3O43524 673 aa26.78■■□□□ 1.88
PTPN6-216ENST00000542277 PRAG1Q86YV5 1406 aa26.78■■□□□ 1.88
PTPN6-216ENST00000542277 CDK12Q9NYV4 1490 aaPredicted RBP26.77■■□□□ 1.88
PTPN6-216ENST00000542277 NUTM2FA1L443 756 aa26.77■■□□□ 1.88
PTPN6-216ENST00000542277 USP21Q9UK80 565 aa26.77■■□□□ 1.88
PTPN6-216ENST00000542277 XPCQ01831 940 aaPredicted RBP26.76■■□□□ 1.87
PTPN6-216ENST00000542277 FNBP4Q8N3X1 1017 aaPredicted RBP26.75■■□□□ 1.87
PTPN6-216ENST00000542277 CCDC144AA2RUR9 1427 aa26.73■■□□□ 1.87
PTPN6-216ENST00000542277 SPATA31E1Q6ZUB1 1445 aa26.73■■□□□ 1.87
PTPN6-216ENST00000542277 NPHP3Q7Z494 1330 aa26.72■■□□□ 1.87
PTPN6-216ENST00000542277 TRPC5Q9UL62 973 aaPredicted RBP26.71■■□□□ 1.87
PTPN6-216ENST00000542277 RGS12O14924 1447 aa26.71■■□□□ 1.87
PTPN6-216ENST00000542277 LRPPRCP42704 1394 aaKnown RBP26.71■■□□□ 1.87
PTPN6-216ENST00000542277 ABCC11Q96J66 1382 aa26.71■■□□□ 1.87
PTPN6-216ENST00000542277 ANKRD30BQ9BXX2 1392 aa26.71■■□□□ 1.87
PTPN6-216ENST00000542277 PLEKHH1Q9ULM0 1364 aa26.7■■□□□ 1.86
PTPN6-216ENST00000542277 C14orf93Q9H972 538 aaKnown RBP26.66■■□□□ 1.86
PTPN6-216ENST00000542277 PPLO60437 1756 aa26.66■■□□□ 1.86
PTPN6-216ENST00000542277 LAMC1P11047 1609 aa26.65■■□□□ 1.86
PTPN6-216ENST00000542277 SIRT1Q96EB6 747 aa26.64■■□□□ 1.86
PTPN6-216ENST00000542277 CFAP70Q5T0N1 1121 aa26.63■■□□□ 1.85
PTPN6-216ENST00000542277 TECPR2O15040 1411 aa26.63■■□□□ 1.85
PTPN6-216ENST00000542277 PXDNQ92626 1479 aa26.61■■□□□ 1.85
PTPN6-216ENST00000542277 KRT28Q7Z3Y7 464 aa26.6■■□□□ 1.85
PTPN6-216ENST00000542277 YTHDC2Q9H6S0 1430 aaKnown RBP26.59■■□□□ 1.85
PTPN6-216ENST00000542277 MYOM2P54296 1465 aa26.59■■□□□ 1.85
PTPN6-216ENST00000542277 PIK3C2GO75747 1445 aa26.58■■□□□ 1.85
PTPN6-216ENST00000542277 SPATA31A3Q5VYP0 1347 aa26.58■■□□□ 1.85
PTPN6-216ENST00000542277 ATRNO75882 1429 aa26.57■■□□□ 1.84
PTPN6-216ENST00000542277 BCL9LQ86UU0 1499 aa26.57■■□□□ 1.84
PTPN6-216ENST00000542277 CDC42BPGQ6DT37 1551 aa26.57■■□□□ 1.84
PTPN6-216ENST00000542277 GJD4Q96KN9 370 aaPredicted RBP26.56■■□□□ 1.84
PTPN6-216ENST00000542277 SAFB2Q14151 953 aaKnown RBP eCLIP26.55■■□□□ 1.84
PTPN6-216ENST00000542277 PHF8Q9UPP1 1060 aa26.54■■□□□ 1.84
PTPN6-216ENST00000542277 ATAD2Q6PL18 1390 aa26.54■■□□□ 1.84
PTPN6-216ENST00000542277 PRAM1Q96QH2 718 aa26.53■■□□□ 1.84
PTPN6-216ENST00000542277 ACIN1Q9UKV3 1341 aaKnown RBP26.53■■□□□ 1.84
PTPN6-216ENST00000542277 DHX57Q6P158 1386 aaKnown RBP26.53■■□□□ 1.84
PTPN6-216ENST00000542277 UNC5CLQ8IV45 518 aa26.51■■□□□ 1.83
PTPN6-216ENST00000542277 CABLES1Q8TDN4 633 aa26.51■■□□□ 1.83
PTPN6-216ENST00000542277 SRCAPQ6ZRS2 3230 aa26.5■■□□□ 1.83
PTPN6-216ENST00000542277 PLEKHG5O94827 1062 aa26.5■■□□□ 1.83
PTPN6-216ENST00000542277 COL22A1Q8NFW1 1626 aaPredicted RBP26.5■■□□□ 1.83
PTPN6-216ENST00000542277 PSME1Q06323 249 aa26.49■■□□□ 1.83
PTPN6-216ENST00000542277 POGKQ9P215 609 aa26.48■■□□□ 1.83
PTPN6-216ENST00000542277 PMFBP1Q8TBY8 1022 aa26.46■■□□□ 1.83
PTPN6-216ENST00000542277 NRXN1Q9ULB1 1477 aa26.45■■□□□ 1.82
PTPN6-216ENST00000542277 LMOD2Q6P5Q4 547 aa26.45■■□□□ 1.82
PTPN6-216ENST00000542277 KDM2AQ9Y2K7 1162 aa26.45■■□□□ 1.82
PTPN6-216ENST00000542277 TRAK1Q9UPV9 953 aa26.44■■□□□ 1.82
PTPN6-216ENST00000542277 HAP1P54257 671 aaPredicted RBP26.43■■□□□ 1.82
PTPN6-216ENST00000542277 CCDC125Q86Z20 511 aa26.43■■□□□ 1.82
PTPN6-216ENST00000542277 RAB3GAP2Q9H2M9 1393 aa26.43■■□□□ 1.82
PTPN6-216ENST00000542277 IFT172Q9UG01 1749 aa26.42■■□□□ 1.82
PTPN6-216ENST00000542277 HIRIP3Q9BW71 556 aaPredicted RBP26.41■■□□□ 1.82
PTPN6-216ENST00000542277 SLIT2O94813 1529 aa26.4■■□□□ 1.82
PTPN6-216ENST00000542277 FAM83GA6ND36 823 aa26.39■■□□□ 1.82
PTPN6-216ENST00000542277 DCAF11Q8TEB1 546 aa26.39■■□□□ 1.82
PTPN6-216ENST00000542277 ZRANB1Q9UGI0 708 aa26.38■■□□□ 1.81
PTPN6-216ENST00000542277 RALGAPBQ86X10 1494 aa26.37■■□□□ 1.81
PTPN6-216ENST00000542277 SBNO1A3KN83 1393 aa26.37■■□□□ 1.81
PTPN6-216ENST00000542277 VPS72Q15906 364 aa26.37■■□□□ 1.81
PTPN6-216ENST00000542277 SEPT12Q8IYM1 358 aa26.37■■□□□ 1.81
PTPN6-216ENST00000542277 KNDC1Q76NI1 1749 aa26.36■■□□□ 1.81
PTPN6-216ENST00000542277 FMN2Q9NZ56 1722 aa26.36■■□□□ 1.81
PTPN6-216ENST00000542277 EP400Q96L91 3159 aa26.36■■□□□ 1.81
PTPN6-216ENST00000542277 TNS3Q68CZ2 1445 aa26.36■■□□□ 1.81
PTPN6-216ENST00000542277 MINK1Q8N4C8 1332 aaPredicted RBP26.36■■□□□ 1.81
PTPN6-216ENST00000542277 ONECUT3O60422 494 aaPredicted RBP26.35■■□□□ 1.81
PTPN6-216ENST00000542277 CCDC9Q9Y3X0 531 aaKnown RBP26.34■■□□□ 1.81
PTPN6-216ENST00000542277 PRR36Q9H6K5 1346 aa26.32■■□□□ 1.8
PTPN6-216ENST00000542277 WASLO00401 505 aaPredicted RBP26.31■■□□□ 1.8
PTPN6-216ENST00000542277 ARHGEF10O15013 1369 aa26.31■■□□□ 1.8
PTPN6-216ENST00000542277 KIF1AQ12756 1690 aa26.29■■□□□ 1.8
PTPN6-216ENST00000542277 DEFB132Q7Z7B7 95 aa26.29■■□□□ 1.8
PTPN6-216ENST00000542277 ANKARQ7Z5J8 1434 aa26.29■■□□□ 1.8
PTPN6-216ENST00000542277 DLC1Q96QB1 1528 aa26.28■■□□□ 1.8
PTPN6-216ENST00000542277 GLI3P10071 1580 aa26.28■■□□□ 1.8
PTPN6-216ENST00000542277 HRCP23327 699 aa26.27■■□□□ 1.8
PTPN6-216ENST00000542277 STAC3Q96MF2 364 aa26.27■■□□□ 1.8
PTPN6-216ENST00000542277 RGPD8O14715 1765 aaPredicted RBP26.26■■□□□ 1.79
PTPN6-216ENST00000542277 ADGRB1O14514 1584 aa26.26■■□□□ 1.79
PTPN6-216ENST00000542277 BTG4Q9NY30 223 aa26.26■■□□□ 1.79
PTPN6-216ENST00000542277 MARF1Q9Y4F3 1742 aaKnown RBP26.25■■□□□ 1.79
PTPN6-216ENST00000542277 GPRASP1Q5JY77 1395 aa26.25■■□□□ 1.79
PTPN6-216ENST00000542277 KRT27Q7Z3Y8 459 aa26.25■■□□□ 1.79
PTPN6-216ENST00000542277 NGDNQ8NEJ9 315 aaKnown RBP26.25■■□□□ 1.79
PTPN6-216ENST00000542277 PAK3O75914 559 aaPredicted RBP26.23■■□□□ 1.79
PTPN6-216ENST00000542277 USP32Q8NFA0 1604 aa26.23■■□□□ 1.79
PTPN6-216ENST00000542277 BLMP54132 1417 aaPredicted RBP26.22■■□□□ 1.79
PTPN6-216ENST00000542277 FAM98CQ17RN3 349 aaKnown RBP26.21■■□□□ 1.79
PTPN6-216ENST00000542277 NUDT16Q96DE0 195 aaKnown RBP26.21■■□□□ 1.79
PTPN6-216ENST00000542277 SF3B2Q13435 895 aaKnown RBP26.2■■□□□ 1.78
PTPN6-216ENST00000542277 A0A0G2JS52 829 aa26.19■■□□□ 1.78
PTPN6-216ENST00000542277 MYT1Q01538 1121 aa26.19■■□□□ 1.78
PTPN6-216ENST00000542277 TNKS1BP1Q9C0C2 1729 aaKnown RBP26.19■■□□□ 1.78
PTPN6-216ENST00000542277 CDK19Q9BWU1 502 aa26.18■■□□□ 1.78
PTPN6-216ENST00000542277 EIF3AQ14152 1382 aaKnown RBP26.17■■□□□ 1.78
PTPN6-216ENST00000542277 FAM182BQ5T319 152 aa26.13■■□□□ 1.77
PTPN6-216ENST00000542277 SPATA31A5Q5VU36 1347 aa26.13■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms