RNA–Protein interactions for RNA: ENST00000542155.5

GTDC1-219, Transcript of glycosyltransferase like domain containing 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GTDC1, Length 2,677 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTDC1-219ENST00000542155 FAM135BQ49AJ0 1406 aa23.92■■□□□ 1.42
GTDC1-219ENST00000542155 PIK3R4Q99570 1358 aa23.91■■□□□ 1.42
GTDC1-219ENST00000542155 CABP2Q9NPB3 220 aa23.88■■□□□ 1.41
GTDC1-219ENST00000542155 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.88■■□□□ 1.41
GTDC1-219ENST00000542155 RBM33Q96EV2 1170 aaKnown RBP23.87■■□□□ 1.41
GTDC1-219ENST00000542155 EVC2Q86UK5 1308 aa23.86■■□□□ 1.41
GTDC1-219ENST00000542155 PTCH1Q13635 1447 aa23.86■■□□□ 1.41
GTDC1-219ENST00000542155 SLC24A1O60721 1099 aa23.86■■□□□ 1.41
GTDC1-219ENST00000542155 MIER1Q8N108 512 aa23.86■■□□□ 1.41
GTDC1-219ENST00000542155 CDCA8Q53HL2 280 aa23.85■■□□□ 1.41
GTDC1-219ENST00000542155 CDK19Q9BWU1 502 aa23.85■■□□□ 1.41
GTDC1-219ENST00000542155 MYOM1P52179 1685 aa23.84■■□□□ 1.41
GTDC1-219ENST00000542155 SRPK2P78362 688 aaKnown RBP23.82■■□□□ 1.4
GTDC1-219ENST00000542155 STRCP1A6NGW2 1772 aa23.81■■□□□ 1.4
GTDC1-219ENST00000542155 PANK3Q9H999 370 aa23.81■■□□□ 1.4
GTDC1-219ENST00000542155 SLC12A5Q9H2X9 1139 aa23.8■■□□□ 1.4
GTDC1-219ENST00000542155 WASLO00401 505 aaPredicted RBP23.8■■□□□ 1.4
GTDC1-219ENST00000542155 NWD1Q149M9 1564 aa23.78■■□□□ 1.4
GTDC1-219ENST00000542155 PER1O15534 1290 aaPredicted RBP23.77■■□□□ 1.4
GTDC1-219ENST00000542155 TMC1Q8TDI8 760 aa23.77■■□□□ 1.39
GTDC1-219ENST00000542155 PUS7Q96PZ0 661 aaKnown RBP23.76■■□□□ 1.39
GTDC1-219ENST00000542155 NUTM2FA1L443 756 aa23.74■■□□□ 1.39
GTDC1-219ENST00000542155 CNGB1Q14028 1251 aaPredicted RBP23.74■■□□□ 1.39
GTDC1-219ENST00000542155 ADGRB2O60241 1585 aa23.74■■□□□ 1.39
GTDC1-219ENST00000542155 PRR36Q9H6K5 1346 aa23.73■■□□□ 1.39
GTDC1-219ENST00000542155 CARD14Q9BXL6 1004 aa23.73■■□□□ 1.39
GTDC1-219ENST00000542155 NALCNQ8IZF0 1738 aa23.72■■□□□ 1.39
GTDC1-219ENST00000542155 PROSER2Q86WR7 435 aaPredicted RBP23.71■■□□□ 1.39
GTDC1-219ENST00000542155 ZNF335Q9H4Z2 1342 aaPredicted RBP23.71■■□□□ 1.39
GTDC1-219ENST00000542155 NUDT16Q96DE0 195 aaKnown RBP23.7■■□□□ 1.39
GTDC1-219ENST00000542155 CABP1Q9NZU7 370 aa23.7■■□□□ 1.39
GTDC1-219ENST00000542155 ATAD2Q6PL18 1390 aa23.69■■□□□ 1.38
GTDC1-219ENST00000542155 ATP7BP35670 1465 aa23.67■■□□□ 1.38
GTDC1-219ENST00000542155 NKTRP30414 1462 aaKnown RBP23.67■■□□□ 1.38
GTDC1-219ENST00000542155 ANP32CO43423 234 aa23.67■■□□□ 1.38
GTDC1-219ENST00000542155 CD163L1Q9NR16 1453 aa23.67■■□□□ 1.38
GTDC1-219ENST00000542155 USP32Q8NFA0 1604 aa23.66■■□□□ 1.38
GTDC1-219ENST00000542155 RGPD8O14715 1765 aaPredicted RBP23.65■■□□□ 1.38
GTDC1-219ENST00000542155 ADGRL3Q9HAR2 1447 aa23.65■■□□□ 1.38
GTDC1-219ENST00000542155 PRKRIP1Q9H875 184 aaPredicted RBP23.65■■□□□ 1.38
GTDC1-219ENST00000542155 TMEM94Q12767 1356 aa23.65■■□□□ 1.38
GTDC1-219ENST00000542155 CCDC61Q9Y6R9 512 aa23.64■■□□□ 1.37
GTDC1-219ENST00000542155 PPIP5K1Q6PFW1 1433 aa23.63■■□□□ 1.37
GTDC1-219ENST00000542155 C14orf37Q86TY3 774 aa23.63■■□□□ 1.37
GTDC1-219ENST00000542155 A0A1W2PP64 1363 aa23.63■■□□□ 1.37
GTDC1-219ENST00000542155 DMRT2Q9Y5R5 561 aa23.63■■□□□ 1.37
GTDC1-219ENST00000542155 ANKRD36BQ8N2N9 1353 aa23.62■■□□□ 1.37
GTDC1-219ENST00000542155 AMER1Q5JTC6 1135 aaPredicted RBP23.62■■□□□ 1.37
GTDC1-219ENST00000542155 CC2D1BQ5T0F9 858 aaKnown RBP23.61■■□□□ 1.37
GTDC1-219ENST00000542155 KNSTRNQ9Y448 316 aa23.61■■□□□ 1.37
GTDC1-219ENST00000542155 FMN2Q9NZ56 1722 aa23.61■■□□□ 1.37
GTDC1-219ENST00000542155 XIRP1Q702N8 1843 aaKnown RBP23.6■■□□□ 1.37
GTDC1-219ENST00000542155 NINLQ9Y2I6 1382 aa23.6■■□□□ 1.37
GTDC1-219ENST00000542155 NSD3Q9BZ95 1437 aa23.6■■□□□ 1.37
GTDC1-219ENST00000542155 CDC42BPGQ6DT37 1551 aa23.59■■□□□ 1.37
GTDC1-219ENST00000542155 TOPAZ1Q8N9V7 1692 aa23.59■■□□□ 1.37
GTDC1-219ENST00000542155 AEBP2Q6ZN18 517 aaPredicted RBP23.58■■□□□ 1.37
GTDC1-219ENST00000542155 LRRC7Q96NW7 1537 aa23.58■■□□□ 1.36
GTDC1-219ENST00000542155 PMFBP1Q8TBY8 1022 aa23.56■■□□□ 1.36
GTDC1-219ENST00000542155 C19orf44Q9H6X5 657 aa23.56■■□□□ 1.36
GTDC1-219ENST00000542155 TERF2IPQ9NYB0 399 aa23.56■■□□□ 1.36
GTDC1-219ENST00000542155 CPSF1Q10570 1443 aaKnown RBP23.56■■□□□ 1.36
GTDC1-219ENST00000542155 PLEKHG3A1L390 1219 aa23.55■■□□□ 1.36
GTDC1-219ENST00000542155 CCDC184Q52MB2 194 aa23.55■■□□□ 1.36
GTDC1-219ENST00000542155 ACEP12821 1306 aa23.53■■□□□ 1.36
GTDC1-219ENST00000542155 HDGFL2Q7Z4V5 671 aaPredicted RBP23.53■■□□□ 1.36
GTDC1-219ENST00000542155 ANKARQ7Z5J8 1434 aa23.52■■□□□ 1.36
GTDC1-219ENST00000542155 KTN1Q86UP2 1357 aaKnown RBP23.52■■□□□ 1.36
GTDC1-219ENST00000542155 PARD3Q8TEW0 1356 aa23.52■■□□□ 1.36
GTDC1-219ENST00000542155 NCOA3Q9Y6Q9 1424 aa23.52■■□□□ 1.35
GTDC1-219ENST00000542155 AKAP12Q02952 1782 aa23.5■■□□□ 1.35
GTDC1-219ENST00000542155 ORAI2Q96SN7 254 aa23.5■■□□□ 1.35
GTDC1-219ENST00000542155 ITSN1Q15811 1721 aa23.49■■□□□ 1.35
GTDC1-219ENST00000542155 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.48■■□□□ 1.35
GTDC1-219ENST00000542155 NPC1L1Q9UHC9 1359 aa23.48■■□□□ 1.35
GTDC1-219ENST00000542155 ESCO1Q5FWF5 840 aa23.47■■□□□ 1.35
GTDC1-219ENST00000542155 FYB1O15117 783 aa23.47■■□□□ 1.35
GTDC1-219ENST00000542155 RALBP1Q15311 655 aa23.47■■□□□ 1.35
GTDC1-219ENST00000542155 MON2Q7Z3U7 1717 aa23.47■■□□□ 1.35
GTDC1-219ENST00000542155 ATF3P18847 181 aa23.46■■□□□ 1.35
GTDC1-219ENST00000542155 CGNL1Q0VF96 1302 aa23.46■■□□□ 1.35
GTDC1-219ENST00000542155 POLR3AO14802 1390 aaPredicted RBP23.46■■□□□ 1.35
GTDC1-219ENST00000542155 C1orf167Q5SNV9 1468 aa23.46■■□□□ 1.35
GTDC1-219ENST00000542155 CCER2I3L3R5 266 aa23.46■■□□□ 1.35
GTDC1-219ENST00000542155 NGDNQ8NEJ9 315 aaKnown RBP23.46■■□□□ 1.35
GTDC1-219ENST00000542155 GGNBP2Q9H3C7 697 aa23.46■■□□□ 1.35
GTDC1-219ENST00000542155 PHF8Q9UPP1 1060 aa23.46■■□□□ 1.35
GTDC1-219ENST00000542155 MST1RQ04912 1400 aa23.45■■□□□ 1.34
GTDC1-219ENST00000542155 MSH6P52701 1360 aa23.45■■□□□ 1.34
GTDC1-219ENST00000542155 ZNF692Q9BU19 519 aaPredicted RBP23.45■■□□□ 1.34
GTDC1-219ENST00000542155 LTBP4Q8N2S1 1624 aa23.45■■□□□ 1.34
GTDC1-219ENST00000542155 ZRANB1Q9UGI0 708 aa23.44■■□□□ 1.34
GTDC1-219ENST00000542155 DCCP43146 1447 aa23.43■■□□□ 1.34
GTDC1-219ENST00000542155 USP6P35125 1406 aa23.43■■□□□ 1.34
GTDC1-219ENST00000542155 EDC4Q6P2E9 1401 aaKnown RBP23.43■■□□□ 1.34
GTDC1-219ENST00000542155 CADPS2Q86UW7 1296 aa23.42■■□□□ 1.34
GTDC1-219ENST00000542155 NME9Q86XW9 330 aa23.42■■□□□ 1.34
GTDC1-219ENST00000542155 MYBBP1AQ9BQG0 1328 aaKnown RBP23.42■■□□□ 1.34
GTDC1-219ENST00000542155 SSH2Q76I76 1423 aa23.41■■□□□ 1.34
GTDC1-219ENST00000542155 TNNT2P45379 298 aaPredicted RBP23.41■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms