RNA–Protein interactions for RNA: ENST00000542068.5

CNOT9-208, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CNOT9, Length 3,259 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-208ENST00000542068 INSRP06213 1382 aa19.56■□□□□ 0.72
CNOT9-208ENST00000542068 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.56■□□□□ 0.72
CNOT9-208ENST00000542068 IDI1Q13907 227 aa19.56■□□□□ 0.72
CNOT9-208ENST00000542068 RTEL1-TNFRSF6BF6WH68 1400 aa19.55■□□□□ 0.72
CNOT9-208ENST00000542068 FBLN1P23142 703 aa19.55■□□□□ 0.72
CNOT9-208ENST00000542068 ZFYVE16Q7Z3T8 1539 aa19.55■□□□□ 0.72
CNOT9-208ENST00000542068 FBXO31Q5XUX0 539 aaPredicted RBP19.55■□□□□ 0.72
CNOT9-208ENST00000542068 VGFO15240 615 aaPredicted RBP19.54■□□□□ 0.72
CNOT9-208ENST00000542068 RARSP54136 660 aaKnown RBP19.54■□□□□ 0.72
CNOT9-208ENST00000542068 PDE3AQ14432 1141 aa19.54■□□□□ 0.72
CNOT9-208ENST00000542068 CLTCL1P53675 1640 aa19.54■□□□□ 0.72
CNOT9-208ENST00000542068 SHROOM2Q13796 1616 aa19.54■□□□□ 0.72
CNOT9-208ENST00000542068 MFAP1P55081 439 aaKnown RBP19.54■□□□□ 0.72
CNOT9-208ENST00000542068 SLC24A1O60721 1099 aa19.53■□□□□ 0.72
CNOT9-208ENST00000542068 MAPK8IP3Q9UPT6 1336 aa19.53■□□□□ 0.72
CNOT9-208ENST00000542068 PIK3C2GO75747 1445 aa19.52■□□□□ 0.72
CNOT9-208ENST00000542068 TSR2Q969E8 191 aaKnown RBP19.52■□□□□ 0.72
CNOT9-208ENST00000542068 FTSJ3Q8IY81 847 aaKnown RBP19.52■□□□□ 0.71
CNOT9-208ENST00000542068 EVC2Q86UK5 1308 aa19.51■□□□□ 0.71
CNOT9-208ENST00000542068 C14orf93Q9H972 538 aaKnown RBP19.51■□□□□ 0.71
CNOT9-208ENST00000542068 PRAM1Q96QH2 718 aa19.5■□□□□ 0.71
CNOT9-208ENST00000542068 PTPRTO14522 1441 aa19.5■□□□□ 0.71
CNOT9-208ENST00000542068 TBC1D2Q9BYX2 928 aa19.49■□□□□ 0.71
CNOT9-208ENST00000542068 UHRF1BP1LA0JNW5 1464 aa19.49■□□□□ 0.71
CNOT9-208ENST00000542068 TRPM2O94759 1503 aa19.49■□□□□ 0.71
CNOT9-208ENST00000542068 RUNDC1Q96C34 613 aa19.49■□□□□ 0.71
CNOT9-208ENST00000542068 NUTM2FA1L443 756 aa19.49■□□□□ 0.71
CNOT9-208ENST00000542068 PMFBP1Q8TBY8 1022 aa19.48■□□□□ 0.71
CNOT9-208ENST00000542068 ERVK-7P63135 1459 aa19.47■□□□□ 0.71
CNOT9-208ENST00000542068 MADDQ8WXG6 1647 aa19.47■□□□□ 0.71
CNOT9-208ENST00000542068 SOX12O15370 315 aa19.47■□□□□ 0.71
CNOT9-208ENST00000542068 RWDD1Q9H446 243 aaPredicted RBP19.46■□□□□ 0.71
CNOT9-208ENST00000542068 NPATQ14207 1427 aa19.45■□□□□ 0.7
CNOT9-208ENST00000542068 FAM69CQ0P6D2 419 aa19.45■□□□□ 0.7
CNOT9-208ENST00000542068 ITPRIPQ8IWB1 547 aa19.45■□□□□ 0.7
CNOT9-208ENST00000542068 CLASP1Q7Z460 1538 aa19.45■□□□□ 0.7
CNOT9-208ENST00000542068 SMC4Q9NTJ3 1288 aa19.45■□□□□ 0.7
CNOT9-208ENST00000542068 ELL2O00472 640 aaPredicted RBP19.44■□□□□ 0.7
CNOT9-208ENST00000542068 ESF1Q9H501 851 aaKnown RBP19.43■□□□□ 0.7
CNOT9-208ENST00000542068 ZNF518AQ6AHZ1 1483 aa19.43■□□□□ 0.7
CNOT9-208ENST00000542068 WAPLQ7Z5K2 1190 aa19.42■□□□□ 0.7
CNOT9-208ENST00000542068 LAMC1P11047 1609 aa19.42■□□□□ 0.7
CNOT9-208ENST00000542068 TBC1D32Q96NH3 1257 aa19.42■□□□□ 0.7
CNOT9-208ENST00000542068 FOXD4L1Q9NU39 408 aa19.42■□□□□ 0.7
CNOT9-208ENST00000542068 CABP1Q9NZU7 370 aa19.42■□□□□ 0.7
CNOT9-208ENST00000542068 SPHKAPQ2M3C7 1700 aa19.41■□□□□ 0.7
CNOT9-208ENST00000542068 SYNMO15061 1565 aa19.4■□□□□ 0.7
CNOT9-208ENST00000542068 HMOX1P09601 288 aa19.4■□□□□ 0.7
CNOT9-208ENST00000542068 EXOSC9Q06265 439 aaKnown RBP19.4■□□□□ 0.7
CNOT9-208ENST00000542068 PANK2Q9BZ23 570 aa19.4■□□□□ 0.7
CNOT9-208ENST00000542068 RRAGDQ9NQL2 400 aaPredicted RBP19.4■□□□□ 0.7
CNOT9-208ENST00000542068 DZIP1LQ8IYY4 767 aaKnown RBP19.39■□□□□ 0.69
CNOT9-208ENST00000542068 ZKSCAN2Q63HK3 967 aa19.39■□□□□ 0.69
CNOT9-208ENST00000542068 C22orf23Q9BZE7 217 aa19.39■□□□□ 0.69
CNOT9-208ENST00000542068 MVPQ14764 893 aaKnown RBP19.38■□□□□ 0.69
CNOT9-208ENST00000542068 MYH16Q9H6N6 1097 aa19.38■□□□□ 0.69
CNOT9-208ENST00000542068 ANTXR1Q9H6X2 564 aa19.38■□□□□ 0.69
CNOT9-208ENST00000542068 TERF2IPQ9NYB0 399 aa19.38■□□□□ 0.69
CNOT9-208ENST00000542068 NPC1L1Q9UHC9 1359 aa19.37■□□□□ 0.69
CNOT9-208ENST00000542068 RIPK4P57078 832 aa19.37■□□□□ 0.69
CNOT9-208ENST00000542068 FAM43AQ8N2R8 423 aa19.37■□□□□ 0.69
CNOT9-208ENST00000542068 HDGFL2Q7Z4V5 671 aaPredicted RBP19.37■□□□□ 0.69
CNOT9-208ENST00000542068 RNF17Q9BXT8 1623 aaKnown RBP19.36■□□□□ 0.69
CNOT9-208ENST00000542068 TET3O43151 1660 aa19.36■□□□□ 0.69
CNOT9-208ENST00000542068 CDK19Q9BWU1 502 aa19.36■□□□□ 0.69
CNOT9-208ENST00000542068 GOLGA6L3A6NEY3 463 aa19.35■□□□□ 0.69
CNOT9-208ENST00000542068 THUMPD2Q9BTF0 503 aaKnown RBP19.35■□□□□ 0.69
CNOT9-208ENST00000542068 POLR3AO14802 1390 aaPredicted RBP19.35■□□□□ 0.69
CNOT9-208ENST00000542068 LNPKQ9C0E8 428 aa19.35■□□□□ 0.69
CNOT9-208ENST00000542068 IQGAP1P46940 1657 aa19.34■□□□□ 0.69
CNOT9-208ENST00000542068 PLEKHG5O94827 1062 aa19.34■□□□□ 0.69
CNOT9-208ENST00000542068 MCM4P33991 863 aa19.34■□□□□ 0.69
CNOT9-208ENST00000542068 L1TD1Q5T7N2 865 aaKnown RBP19.34■□□□□ 0.69
CNOT9-208ENST00000542068 WDR63Q8IWG1 891 aa19.34■□□□□ 0.69
CNOT9-208ENST00000542068 SSH1Q8WYL5 1049 aa19.34■□□□□ 0.69
CNOT9-208ENST00000542068 NOB1Q9ULX3 412 aaKnown RBP19.33■□□□□ 0.69
CNOT9-208ENST00000542068 XRCC6P12956 609 aaKnown RBP eCLIP19.33■□□□□ 0.68
CNOT9-208ENST00000542068 TRIM27P14373 513 aa19.33■□□□□ 0.68
CNOT9-208ENST00000542068 NGEFQ8N5V2 710 aa19.33■□□□□ 0.68
CNOT9-208ENST00000542068 KDM5AP29375 1690 aaKnown RBP19.32■□□□□ 0.68
CNOT9-208ENST00000542068 ABCA6Q8N139 1617 aa19.32■□□□□ 0.68
CNOT9-208ENST00000542068 NAP1L5Q96NT1 182 aaPredicted RBP19.32■□□□□ 0.68
CNOT9-208ENST00000542068 RPGRIP1LQ68CZ1 1315 aa19.32■□□□□ 0.68
CNOT9-208ENST00000542068 FYB1O15117 783 aa19.31■□□□□ 0.68
CNOT9-208ENST00000542068 DIAPH1O60610 1272 aaKnown RBP19.31■□□□□ 0.68
CNOT9-208ENST00000542068 NCKAP5LQ9HCH0 1330 aa19.31■□□□□ 0.68
CNOT9-208ENST00000542068 TRAK2O60296 914 aa19.31■□□□□ 0.68
CNOT9-208ENST00000542068 TXNDC2Q86VQ3 553 aa19.31■□□□□ 0.68
CNOT9-208ENST00000542068 HSCBQ8IWL3 235 aa19.31■□□□□ 0.68
CNOT9-208ENST00000542068 C1orf115Q9H7X2 142 aa19.31■□□□□ 0.68
CNOT9-208ENST00000542068 MAP3K4Q9Y6R4 1608 aa19.31■□□□□ 0.68
CNOT9-208ENST00000542068 POGZQ7Z3K3 1410 aa19.3■□□□□ 0.68
CNOT9-208ENST00000542068 YEATS2Q9ULM3 1422 aa19.3■□□□□ 0.68
CNOT9-208ENST00000542068 MYOM1P52179 1685 aa19.3■□□□□ 0.68
CNOT9-208ENST00000542068 TMEM57Q8N5G2 664 aa19.3■□□□□ 0.68
CNOT9-208ENST00000542068 HSP90AA1P07900 732 aaKnown RBP19.3■□□□□ 0.68
CNOT9-208ENST00000542068 SLC52A1Q9NWF4 448 aa19.3■□□□□ 0.68
CNOT9-208ENST00000542068 EFCAB6Q5THR3 1501 aa19.3■□□□□ 0.68
CNOT9-208ENST00000542068 NINLQ9Y2I6 1382 aa19.29■□□□□ 0.68
CNOT9-208ENST00000542068 CEP152O94986 1710 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms