RNA–Protein interactions for RNA: ENST00000541871.1

CACNA1C-IT2-201, CACNA1C intronic transcript 2, humanhuman

TSL 2 BASIC

Gene CACNA1C-IT2, Length 589 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-IT2-201ENST00000541871 DACH1Q9UI36 760 aa6.93□□□□□ -1.3
CACNA1C-IT2-201ENST00000541871 TTC24A2A3L6 582 aaPredicted RBP6.92□□□□□ -1.3
CACNA1C-IT2-201ENST00000541871 C11orf95C9JLR9 678 aaPredicted RBP6.92□□□□□ -1.3
CACNA1C-IT2-201ENST00000541871 PRDM9Q9NQV7 894 aa6.92□□□□□ -1.3
CACNA1C-IT2-201ENST00000541871 GMPR2Q9P2T1 348 aaKnown RBP6.92□□□□□ -1.3
CACNA1C-IT2-201ENST00000541871 WFS1O76024 890 aa6.91□□□□□ -1.3
CACNA1C-IT2-201ENST00000541871 NLRP7Q8WX94 980 aa6.91□□□□□ -1.3
CACNA1C-IT2-201ENST00000541871 WNT7AO00755 349 aa6.9□□□□□ -1.3
CACNA1C-IT2-201ENST00000541871 Q3C1V9 767 aa6.9□□□□□ -1.3
CACNA1C-IT2-201ENST00000541871 RNF19BQ6ZMZ0 732 aa6.9□□□□□ -1.3
CACNA1C-IT2-201ENST00000541871 PHOX2BQ99453 314 aa6.9□□□□□ -1.3
CACNA1C-IT2-201ENST00000541871 SNIP1Q8TAD8 396 aaKnown RBP6.89□□□□□ -1.31
CACNA1C-IT2-201ENST00000541871 MMP16P51512 607 aa6.88□□□□□ -1.31
CACNA1C-IT2-201ENST00000541871 HOMEZQ8IX15 550 aa6.88□□□□□ -1.31
CACNA1C-IT2-201ENST00000541871 SMPD1P17405 629 aa6.87□□□□□ -1.31
CACNA1C-IT2-201ENST00000541871 TRIM32Q13049 653 aa6.87□□□□□ -1.31
CACNA1C-IT2-201ENST00000541871 TIMELESSQ9UNS1 1208 aa6.87□□□□□ -1.31
CACNA1C-IT2-201ENST00000541871 NFX1Q12986 1120 aaKnown RBP6.86□□□□□ -1.31
CACNA1C-IT2-201ENST00000541871 GPIHBP1Q8IV16 184 aa6.86□□□□□ -1.31
CACNA1C-IT2-201ENST00000541871 REPIN1Q9BWE0 567 aaKnown RBP6.86□□□□□ -1.31
CACNA1C-IT2-201ENST00000541871 WIPF1O43516 503 aa6.85□□□□□ -1.31
CACNA1C-IT2-201ENST00000541871 CD46P15529 392 aa6.85□□□□□ -1.31
CACNA1C-IT2-201ENST00000541871 MRGPRX2Q96LB1 330 aa6.85□□□□□ -1.31
CACNA1C-IT2-201ENST00000541871 USB1Q9BQ65 265 aaKnown RBP6.85□□□□□ -1.31
CACNA1C-IT2-201ENST00000541871 SENP2Q9HC62 589 aa6.85□□□□□ -1.31
CACNA1C-IT2-201ENST00000541871 ATP13A2Q9NQ11 1180 aa6.85□□□□□ -1.31
CACNA1C-IT2-201ENST00000541871 KDM4AO75164 1064 aa6.84□□□□□ -1.31
CACNA1C-IT2-201ENST00000541871 DXOO77932 396 aaKnown RBP6.84□□□□□ -1.31
CACNA1C-IT2-201ENST00000541871 INSM1Q01101 510 aaPredicted RBP6.84□□□□□ -1.31
CACNA1C-IT2-201ENST00000541871 STK17AQ9UEE5 414 aa6.84□□□□□ -1.31
CACNA1C-IT2-201ENST00000541871 J3QL48 77 aa6.83□□□□□ -1.32
CACNA1C-IT2-201ENST00000541871 USP46P62068 366 aa6.83□□□□□ -1.32
CACNA1C-IT2-201ENST00000541871 TRIM47Q96LD4 638 aa6.83□□□□□ -1.32
CACNA1C-IT2-201ENST00000541871 KIFC2Q96AC6 838 aa6.82□□□□□ -1.32
CACNA1C-IT2-201ENST00000541871 WNT7BP56706 349 aa6.81□□□□□ -1.32
CACNA1C-IT2-201ENST00000541871 MAP2K5Q13163 448 aa6.81□□□□□ -1.32
CACNA1C-IT2-201ENST00000541871 BCANQ96GW7 911 aa6.81□□□□□ -1.32
CACNA1C-IT2-201ENST00000541871 TULP1O00294 542 aaPredicted RBP6.8□□□□□ -1.32
CACNA1C-IT2-201ENST00000541871 TERTO14746 1132 aaKnown RBP6.8□□□□□ -1.32
CACNA1C-IT2-201ENST00000541871 SNRPBP14678 240 aaKnown RBP6.8□□□□□ -1.32
CACNA1C-IT2-201ENST00000541871 PLCB2Q00722 1185 aa6.8□□□□□ -1.32
CACNA1C-IT2-201ENST00000541871 RC3H1Q5TC82 1133 aaKnown RBP6.8□□□□□ -1.32
CACNA1C-IT2-201ENST00000541871 CCDC24Q8N4L8 307 aa6.8□□□□□ -1.32
CACNA1C-IT2-201ENST00000541871 HPS1Q92902 700 aa6.8□□□□□ -1.32
CACNA1C-IT2-201ENST00000541871 HOXA2O43364 376 aa6.78□□□□□ -1.32
CACNA1C-IT2-201ENST00000541871 SKOR1P84550 965 aa6.78□□□□□ -1.32
CACNA1C-IT2-201ENST00000541871 IRF6O14896 467 aa6.77□□□□□ -1.33
CACNA1C-IT2-201ENST00000541871 JUNDP17535 347 aa6.77□□□□□ -1.33
CACNA1C-IT2-201ENST00000541871 MDM2Q00987 491 aaPredicted RBP6.77□□□□□ -1.33
CACNA1C-IT2-201ENST00000541871 MINK1Q8N4C8 1332 aaPredicted RBP6.76□□□□□ -1.33
CACNA1C-IT2-201ENST00000541871 HLA-CQ95604 372 aa6.76□□□□□ -1.33
CACNA1C-IT2-201ENST00000541871 ALDH1A1P00352 501 aa6.75□□□□□ -1.33
CACNA1C-IT2-201ENST00000541871 LCE2CQ5TA81 110 aa6.75□□□□□ -1.33
CACNA1C-IT2-201ENST00000541871 EIF5BO60841 1220 aaKnown RBP6.74□□□□□ -1.33
CACNA1C-IT2-201ENST00000541871 RETREG3Q86VR2 466 aa6.74□□□□□ -1.33
CACNA1C-IT2-201ENST00000541871 SLC16A10Q8TF71 515 aa6.74□□□□□ -1.33
CACNA1C-IT2-201ENST00000541871 NUDT12Q9BQG2 462 aa6.74□□□□□ -1.33
CACNA1C-IT2-201ENST00000541871 SIAH2O43255 324 aa6.73□□□□□ -1.33
CACNA1C-IT2-201ENST00000541871 CLCN1P35523 988 aa6.73□□□□□ -1.33
CACNA1C-IT2-201ENST00000541871 GPCPD1Q9NPB8 672 aa6.73□□□□□ -1.33
CACNA1C-IT2-201ENST00000541871 GUCA2AQ02747 115 aa6.72□□□□□ -1.33
CACNA1C-IT2-201ENST00000541871 NUTM1Q86Y26 1132 aa6.72□□□□□ -1.33
CACNA1C-IT2-201ENST00000541871 NPAS3Q8IXF0 933 aa6.72□□□□□ -1.33
CACNA1C-IT2-201ENST00000541871 EHBP1Q8NDI1 1231 aa6.72□□□□□ -1.33
CACNA1C-IT2-201ENST00000541871 FAM217BQ9NTX9 383 aaPredicted RBP6.72□□□□□ -1.33
CACNA1C-IT2-201ENST00000541871 NXF1Q9UBU9 619 aaKnown RBP6.72□□□□□ -1.33
CACNA1C-IT2-201ENST00000541871 FAM181BA6NEQ2 426 aa6.71□□□□□ -1.34
CACNA1C-IT2-201ENST00000541871 SYMPKQ92797 1274 aaKnown RBP6.71□□□□□ -1.34
CACNA1C-IT2-201ENST00000541871 CCDC102AQ96A19 550 aa6.71□□□□□ -1.34
CACNA1C-IT2-201ENST00000541871 WASF2Q9Y6W5 498 aa6.71□□□□□ -1.34
CACNA1C-IT2-201ENST00000541871 CAPN5O15484 640 aaPredicted RBP6.7□□□□□ -1.34
CACNA1C-IT2-201ENST00000541871 PTCRAQ6ISU1 281 aaPredicted RBP6.7□□□□□ -1.34
CACNA1C-IT2-201ENST00000541871 FDX1P10109 184 aa6.69□□□□□ -1.34
CACNA1C-IT2-201ENST00000541871 TPRNQ4KMQ1 711 aa6.69□□□□□ -1.34
CACNA1C-IT2-201ENST00000541871 TRIM46Q7Z4K8 759 aa6.69□□□□□ -1.34
CACNA1C-IT2-201ENST00000541871 KRI1Q8N9T8 703 aaKnown RBP6.69□□□□□ -1.34
CACNA1C-IT2-201ENST00000541871 CCNYL3P0C7X3 344 aa6.68□□□□□ -1.34
CACNA1C-IT2-201ENST00000541871 MS4A1P11836 297 aa6.68□□□□□ -1.34
CACNA1C-IT2-201ENST00000541871 SH3BP2P78314 561 aa6.68□□□□□ -1.34
CACNA1C-IT2-201ENST00000541871 IRF7Q92985 503 aa6.68□□□□□ -1.34
CACNA1C-IT2-201ENST00000541871 C6orf229H3BNL8 230 aa6.67□□□□□ -1.34
CACNA1C-IT2-201ENST00000541871 BMP1P13497 986 aa6.67□□□□□ -1.34
CACNA1C-IT2-201ENST00000541871 HAP1P54257 671 aaPredicted RBP6.67□□□□□ -1.34
CACNA1C-IT2-201ENST00000541871 PTPRNQ16849 979 aa6.67□□□□□ -1.34
CACNA1C-IT2-201ENST00000541871 PODXL2Q9NZ53 605 aa6.67□□□□□ -1.34
CACNA1C-IT2-201ENST00000541871 GMPRP36959 345 aa6.66□□□□□ -1.34
CACNA1C-IT2-201ENST00000541871 UNC93B1Q9H1C4 597 aa6.66□□□□□ -1.34
CACNA1C-IT2-201ENST00000541871 EVA1BQ9NVM1 165 aa6.66□□□□□ -1.34
CACNA1C-IT2-201ENST00000541871 PCDHGC3Q9UN70 934 aa6.66□□□□□ -1.34
CACNA1C-IT2-201ENST00000541871 KDM2AQ9Y2K7 1162 aa6.66□□□□□ -1.34
CACNA1C-IT2-201ENST00000541871 PLEKHG3A1L390 1219 aa6.65□□□□□ -1.34
CACNA1C-IT2-201ENST00000541871 MPNDQ8N594 471 aa6.65□□□□□ -1.34
CACNA1C-IT2-201ENST00000541871 ZSCAN1Q8NBB4 408 aa6.65□□□□□ -1.34
CACNA1C-IT2-201ENST00000541871 GTF3C3Q9Y5Q9 886 aa6.65□□□□□ -1.34
CACNA1C-IT2-201ENST00000541871 H3BM21 787 aa6.64□□□□□ -1.35
CACNA1C-IT2-201ENST00000541871 VARSP26640 1264 aaKnown RBP6.64□□□□□ -1.35
CACNA1C-IT2-201ENST00000541871 KCNH2Q12809 1159 aa6.64□□□□□ -1.35
CACNA1C-IT2-201ENST00000541871 SPDYE5A6NIY4 337 aa6.63□□□□□ -1.35
CACNA1C-IT2-201ENST00000541871 SSTR3P32745 418 aaPredicted RBP6.63□□□□□ -1.35
CACNA1C-IT2-201ENST00000541871 DESI1Q6ICB0 168 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms