RNA–Protein interactions for RNA: ENST00000541640.5

PRKAB1-206, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKAB1, Length 2,303 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-206ENST00000541640 APAF1O14727 1248 aa17.4■□□□□ 0.38
PRKAB1-206ENST00000541640 MS4A1P11836 297 aa17.4■□□□□ 0.38
PRKAB1-206ENST00000541640 TULP4Q9NRJ4 1543 aa17.4■□□□□ 0.38
PRKAB1-206ENST00000541640 SLC12A5Q9H2X9 1139 aa17.39■□□□□ 0.38
PRKAB1-206ENST00000541640 PREX1Q8TCU6 1659 aa17.39■□□□□ 0.38
PRKAB1-206ENST00000541640 NKTRP30414 1462 aaKnown RBP17.39■□□□□ 0.37
PRKAB1-206ENST00000541640 C20orf194Q5TEA3 1177 aa17.38■□□□□ 0.37
PRKAB1-206ENST00000541640 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.38■□□□□ 0.37
PRKAB1-206ENST00000541640 SLC52A1Q9NWF4 448 aa17.38■□□□□ 0.37
PRKAB1-206ENST00000541640 ANP32AP39687 249 aaKnown RBP17.38■□□□□ 0.37
PRKAB1-206ENST00000541640 MORC1Q86VD1 984 aa17.38■□□□□ 0.37
PRKAB1-206ENST00000541640 EVC2Q86UK5 1308 aa17.37■□□□□ 0.37
PRKAB1-206ENST00000541640 MYO5BQ9ULV0 1848 aa17.37■□□□□ 0.37
PRKAB1-206ENST00000541640 TMEM131LA2VDJ0 1609 aa17.37■□□□□ 0.37
PRKAB1-206ENST00000541640 E9PSI1 815 aa17.37■□□□□ 0.37
PRKAB1-206ENST00000541640 IDI1Q13907 227 aa17.37■□□□□ 0.37
PRKAB1-206ENST00000541640 NOP58Q9Y2X3 529 aaKnown RBP17.37■□□□□ 0.37
PRKAB1-206ENST00000541640 SPINK5Q9NQ38 1064 aaPredicted RBP17.36■□□□□ 0.37
PRKAB1-206ENST00000541640 IPO9Q96P70 1041 aaKnown RBP17.35■□□□□ 0.37
PRKAB1-206ENST00000541640 CGNL1Q0VF96 1302 aa17.35■□□□□ 0.37
PRKAB1-206ENST00000541640 ANKRD36BQ8N2N9 1353 aa17.35■□□□□ 0.37
PRKAB1-206ENST00000541640 NSD2O96028 1365 aa17.35■□□□□ 0.37
PRKAB1-206ENST00000541640 KDM2BQ8NHM5 1336 aa17.34■□□□□ 0.37
PRKAB1-206ENST00000541640 NUTM2DQ5VT03 806 aaPredicted RBP17.33■□□□□ 0.37
PRKAB1-206ENST00000541640 PDE4AP27815 886 aa17.33■□□□□ 0.36
PRKAB1-206ENST00000541640 BACH2Q9BYV9 841 aa17.32■□□□□ 0.36
PRKAB1-206ENST00000541640 IQSEC2Q5JU85 1478 aa17.32■□□□□ 0.36
PRKAB1-206ENST00000541640 NINLQ9Y2I6 1382 aa17.31■□□□□ 0.36
PRKAB1-206ENST00000541640 ARHGEF40Q8TER5 1519 aa17.31■□□□□ 0.36
PRKAB1-206ENST00000541640 CENPQQ7L2Z9 268 aaPredicted RBP17.3■□□□□ 0.36
PRKAB1-206ENST00000541640 WWC1Q8IX03 1113 aa17.3■□□□□ 0.36
PRKAB1-206ENST00000541640 RUNDC1Q96C34 613 aa17.3■□□□□ 0.36
PRKAB1-206ENST00000541640 DMRT2Q9Y5R5 561 aa17.3■□□□□ 0.36
PRKAB1-206ENST00000541640 CLTCQ00610 1675 aaKnown RBP17.29■□□□□ 0.36
PRKAB1-206ENST00000541640 REREQ9P2R6 1566 aa17.29■□□□□ 0.36
PRKAB1-206ENST00000541640 PTPRMP28827 1452 aa17.29■□□□□ 0.36
PRKAB1-206ENST00000541640 PAK3O75914 559 aaPredicted RBP17.28■□□□□ 0.36
PRKAB1-206ENST00000541640 TNNT2P45379 298 aaPredicted RBP17.28■□□□□ 0.36
PRKAB1-206ENST00000541640 CFAP53Q96M91 514 aa17.28■□□□□ 0.36
PRKAB1-206ENST00000541640 MTHFSP49914 203 aa17.27■□□□□ 0.36
PRKAB1-206ENST00000541640 PHF23Q9BUL5 403 aaPredicted RBP17.27■□□□□ 0.35
PRKAB1-206ENST00000541640 CABP2Q9NPB3 220 aa17.27■□□□□ 0.35
PRKAB1-206ENST00000541640 NCBP3Q53F19 620 aaKnown RBP17.26■□□□□ 0.35
PRKAB1-206ENST00000541640 ABCC11Q96J66 1382 aa17.26■□□□□ 0.35
PRKAB1-206ENST00000541640 AGLP35573 1532 aa17.26■□□□□ 0.35
PRKAB1-206ENST00000541640 ANKRD26Q9UPS8 1709 aa17.25■□□□□ 0.35
PRKAB1-206ENST00000541640 BCAR3O75815 825 aa17.25■□□□□ 0.35
PRKAB1-206ENST00000541640 ZBTB47Q9UFB7 747 aaPredicted RBP17.25■□□□□ 0.35
PRKAB1-206ENST00000541640 YTHDC2Q9H6S0 1430 aaKnown RBP17.25■□□□□ 0.35
PRKAB1-206ENST00000541640 A0A1W2PP64 1363 aa17.24■□□□□ 0.35
PRKAB1-206ENST00000541640 ATAD2Q6PL18 1390 aa17.24■□□□□ 0.35
PRKAB1-206ENST00000541640 CCDC27Q2M243 656 aa17.24■□□□□ 0.35
PRKAB1-206ENST00000541640 TCP11L2Q8N4U5 519 aa17.24■□□□□ 0.35
PRKAB1-206ENST00000541640 ALKQ9UM73 1620 aa17.24■□□□□ 0.35
PRKAB1-206ENST00000541640 WDR63Q8IWG1 891 aa17.24■□□□□ 0.35
PRKAB1-206ENST00000541640 PDE3AQ14432 1141 aa17.23■□□□□ 0.35
PRKAB1-206ENST00000541640 PPP6R1Q9UPN7 881 aa17.23■□□□□ 0.35
PRKAB1-206ENST00000541640 ADGRB2O60241 1585 aa17.23■□□□□ 0.35
PRKAB1-206ENST00000541640 MLECQ14165 292 aa17.22■□□□□ 0.35
PRKAB1-206ENST00000541640 STK26Q9P289 416 aa17.22■□□□□ 0.35
PRKAB1-206ENST00000541640 MED14O60244 1454 aa17.22■□□□□ 0.35
PRKAB1-206ENST00000541640 SAFB2Q14151 953 aaKnown RBP eCLIP17.22■□□□□ 0.35
PRKAB1-206ENST00000541640 FBXO31Q5XUX0 539 aaPredicted RBP17.21■□□□□ 0.35
PRKAB1-206ENST00000541640 SKAP1Q86WV1 359 aa17.21■□□□□ 0.35
PRKAB1-206ENST00000541640 SRPK2P78362 688 aaKnown RBP17.21■□□□□ 0.35
PRKAB1-206ENST00000541640 CD163L1Q9NR16 1453 aa17.2■□□□□ 0.34
PRKAB1-206ENST00000541640 NPM2Q86SE8 214 aaKnown RBP17.19■□□□□ 0.34
PRKAB1-206ENST00000541640 PRAM1Q96QH2 718 aa17.19■□□□□ 0.34
PRKAB1-206ENST00000541640 RRP7AQ9Y3A4 280 aaKnown RBP17.19■□□□□ 0.34
PRKAB1-206ENST00000541640 SPATA31D1Q6ZQQ2 1576 aa17.19■□□□□ 0.34
PRKAB1-206ENST00000541640 NEUROD2Q15784 382 aa17.19■□□□□ 0.34
PRKAB1-206ENST00000541640 COL3A1P02461 1466 aaPredicted RBP17.18■□□□□ 0.34
PRKAB1-206ENST00000541640 TERF2IPQ9NYB0 399 aa17.18■□□□□ 0.34
PRKAB1-206ENST00000541640 NLRP1Q9C000 1473 aa17.18■□□□□ 0.34
PRKAB1-206ENST00000541640 POGKQ9P215 609 aa17.18■□□□□ 0.34
PRKAB1-206ENST00000541640 DLC1Q96QB1 1528 aa17.17■□□□□ 0.34
PRKAB1-206ENST00000541640 MINK1Q8N4C8 1332 aaPredicted RBP17.17■□□□□ 0.34
PRKAB1-206ENST00000541640 SETD1AO15047 1707 aaKnown RBP17.17■□□□□ 0.34
PRKAB1-206ENST00000541640 KIF20BQ96Q89 1820 aa17.16■□□□□ 0.34
PRKAB1-206ENST00000541640 A2ML1A8K2U0 1454 aa17.16■□□□□ 0.34
PRKAB1-206ENST00000541640 U2AF1L5P0DN76 240 aaPredicted RBP17.16■□□□□ 0.34
PRKAB1-206ENST00000541640 RARSP54136 660 aaKnown RBP17.16■□□□□ 0.34
PRKAB1-206ENST00000541640 U2AF1Q01081 240 aaKnown RBP eCLIP17.16■□□□□ 0.34
PRKAB1-206ENST00000541640 FYB1O15117 783 aa17.14■□□□□ 0.33
PRKAB1-206ENST00000541640 STAG3Q9UJ98 1225 aa17.14■□□□□ 0.33
PRKAB1-206ENST00000541640 CANXP27824 592 aaKnown RBP17.14■□□□□ 0.33
PRKAB1-206ENST00000541640 AAMPQ13685 434 aa17.14■□□□□ 0.33
PRKAB1-206ENST00000541640 FAM161AQ3B820 660 aa17.14■□□□□ 0.33
PRKAB1-206ENST00000541640 GGNBP2Q9H3C7 697 aa17.14■□□□□ 0.33
PRKAB1-206ENST00000541640 MYH16Q9H6N6 1097 aa17.14■□□□□ 0.33
PRKAB1-206ENST00000541640 SENP3Q9H4L4 574 aaPredicted RBP17.13■□□□□ 0.33
PRKAB1-206ENST00000541640 HDGFL2Q7Z4V5 671 aaPredicted RBP17.13■□□□□ 0.33
PRKAB1-206ENST00000541640 CLUAP1Q96AJ1 413 aa17.13■□□□□ 0.33
PRKAB1-206ENST00000541640 CDK19Q9BWU1 502 aa17.13■□□□□ 0.33
PRKAB1-206ENST00000541640 ESF1Q9H501 851 aaKnown RBP17.13■□□□□ 0.33
PRKAB1-206ENST00000541640 PLEKHF1Q96S99 279 aa17.12■□□□□ 0.33
PRKAB1-206ENST00000541640 C8orf34Q49A92 452 aa17.12■□□□□ 0.33
PRKAB1-206ENST00000541640 PANK1Q8TE04 598 aa17.12■□□□□ 0.33
PRKAB1-206ENST00000541640 RIMS2Q9UQ26 1411 aa17.11■□□□□ 0.33
PRKAB1-206ENST00000541640 DDRGK1Q96HY6 314 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms