RNA–Protein interactions for RNA: ENST00000541600.5

EPHA4-214, Transcript of EPH receptor A4, humanhuman

TSL 2

Gene EPHA4, Length 558 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-214ENST00000541600 DDRGK1Q96HY6 314 aa9.34□□□□□ -0.91
EPHA4-214ENST00000541600 PZPP20742 1482 aa9.34□□□□□ -0.91
EPHA4-214ENST00000541600 MINK1Q8N4C8 1332 aaPredicted RBP9.33□□□□□ -0.92
EPHA4-214ENST00000541600 ARHGEF5Q12774 1597 aa9.33□□□□□ -0.92
EPHA4-214ENST00000541600 KDM5DQ9BY66 1539 aa9.33□□□□□ -0.92
EPHA4-214ENST00000541600 FLIIQ13045 1269 aa9.33□□□□□ -0.92
EPHA4-214ENST00000541600 CHIC2Q9UKJ5 165 aa9.33□□□□□ -0.92
EPHA4-214ENST00000541600 SPATA31E1Q6ZUB1 1445 aa9.32□□□□□ -0.92
EPHA4-214ENST00000541600 SCAPERQ9BY12 1400 aa9.32□□□□□ -0.92
EPHA4-214ENST00000541600 POLR1AO95602 1720 aaPredicted RBP9.32□□□□□ -0.92
EPHA4-214ENST00000541600 EIF4G2P78344 907 aaKnown RBP eCLIP9.32□□□□□ -0.92
EPHA4-214ENST00000541600 RSPH4AQ5TD94 716 aa9.32□□□□□ -0.92
EPHA4-214ENST00000541600 TRIM52Q96A61 297 aa9.32□□□□□ -0.92
EPHA4-214ENST00000541600 CFDP1Q9UEE9 299 aaPredicted RBP9.32□□□□□ -0.92
EPHA4-214ENST00000541600 SUPT16HQ9Y5B9 1047 aaKnown RBP9.32□□□□□ -0.92
EPHA4-214ENST00000541600 ANKRD30AQ9BXX3 1397 aa9.32□□□□□ -0.92
EPHA4-214ENST00000541600 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.31□□□□□ -0.92
EPHA4-214ENST00000541600 CDC42BPAQ5VT25 1732 aa9.31□□□□□ -0.92
EPHA4-214ENST00000541600 PLEKHD1A6NEE1 506 aa9.31□□□□□ -0.92
EPHA4-214ENST00000541600 FXR2P51116 673 aaKnown RBP eCLIP9.31□□□□□ -0.92
EPHA4-214ENST00000541600 L3MBTL2Q969R5 705 aa9.31□□□□□ -0.92
EPHA4-214ENST00000541600 TMEM106CQ9BVX2 250 aa9.31□□□□□ -0.92
EPHA4-214ENST00000541600 MBD5Q9P267 1494 aa9.31□□□□□ -0.92
EPHA4-214ENST00000541600 KIF14Q15058 1648 aa9.31□□□□□ -0.92
EPHA4-214ENST00000541600 KIAA1107Q9UPP5 1409 aa9.31□□□□□ -0.92
EPHA4-214ENST00000541600 HSPA5P11021 654 aaKnown RBP9.3□□□□□ -0.92
EPHA4-214ENST00000541600 MAP2K5Q13163 448 aa9.3□□□□□ -0.92
EPHA4-214ENST00000541600 AMHR2Q16671 573 aa9.3□□□□□ -0.92
EPHA4-214ENST00000541600 AFAP1Q8N556 730 aa9.3□□□□□ -0.92
EPHA4-214ENST00000541600 ZNF644Q9H582 1327 aaPredicted RBP9.3□□□□□ -0.92
EPHA4-214ENST00000541600 APBB1O00213 710 aa9.29□□□□□ -0.92
EPHA4-214ENST00000541600 WASHC2AQ641Q2 1341 aa9.29□□□□□ -0.92
EPHA4-214ENST00000541600 IRF6O14896 467 aa9.28□□□□□ -0.92
EPHA4-214ENST00000541600 PARP9Q8IXQ6 854 aa9.28□□□□□ -0.92
EPHA4-214ENST00000541600 CCDC102AQ96A19 550 aa9.28□□□□□ -0.92
EPHA4-214ENST00000541600 CCDC7Q96M83 1385 aa9.27□□□□□ -0.93
EPHA4-214ENST00000541600 DSG2Q14126 1118 aa9.27□□□□□ -0.93
EPHA4-214ENST00000541600 GOPCQ9HD26 462 aa9.27□□□□□ -0.93
EPHA4-214ENST00000541600 CNTLNQ9NXG0 1405 aa9.27□□□□□ -0.93
EPHA4-214ENST00000541600 ANKRD50Q9ULJ7 1429 aa9.27□□□□□ -0.93
EPHA4-214ENST00000541600 MAST1Q9Y2H9 1570 aa9.27□□□□□ -0.93
EPHA4-214ENST00000541600 PLA2R1Q13018 1463 aa9.27□□□□□ -0.93
EPHA4-214ENST00000541600 VWDEQ8N2E2 1590 aa9.26□□□□□ -0.93
EPHA4-214ENST00000541600 ONECUT3O60422 494 aaPredicted RBP9.26□□□□□ -0.93
EPHA4-214ENST00000541600 NBPF8Q3BBV2 869 aa9.25□□□□□ -0.93
EPHA4-214ENST00000541600 ZRANB1Q9UGI0 708 aa9.25□□□□□ -0.93
EPHA4-214ENST00000541600 ZMYM3Q14202 1370 aa9.24□□□□□ -0.93
EPHA4-214ENST00000541600 NEURL4Q96JN8 1562 aa9.24□□□□□ -0.93
EPHA4-214ENST00000541600 DIP2CQ9Y2E4 1556 aa9.24□□□□□ -0.93
EPHA4-214ENST00000541600 PREX2Q70Z35 1606 aa9.24□□□□□ -0.93
EPHA4-214ENST00000541600 ERICH6BQ5W0A0 696 aa9.24□□□□□ -0.93
EPHA4-214ENST00000541600 PHF12Q96QT6 1004 aa9.24□□□□□ -0.93
EPHA4-214ENST00000541600 CPS1P31327 1500 aa9.24□□□□□ -0.93
EPHA4-214ENST00000541600 PLCH2O75038 1416 aa9.23□□□□□ -0.93
EPHA4-214ENST00000541600 NPATQ14207 1427 aa9.23□□□□□ -0.93
EPHA4-214ENST00000541600 PLEKHH2Q8IVE3 1493 aa9.23□□□□□ -0.93
EPHA4-214ENST00000541600 NUTM2FA1L443 756 aa9.23□□□□□ -0.93
EPHA4-214ENST00000541600 FOXK1P85037 733 aa9.23□□□□□ -0.93
EPHA4-214ENST00000541600 NPM2Q86SE8 214 aaKnown RBP9.23□□□□□ -0.93
EPHA4-214ENST00000541600 HIRIP3Q9BW71 556 aaPredicted RBP9.23□□□□□ -0.93
EPHA4-214ENST00000541600 CDC42BPBQ9Y5S2 1711 aa9.22□□□□□ -0.93
EPHA4-214ENST00000541600 STRCP1A6NGW2 1772 aa9.22□□□□□ -0.93
EPHA4-214ENST00000541600 A6NJR5 290 aa9.22□□□□□ -0.93
EPHA4-214ENST00000541600 GNPATO15228 680 aa9.22□□□□□ -0.93
EPHA4-214ENST00000541600 TSPY4P0CV99 314 aa9.22□□□□□ -0.93
EPHA4-214ENST00000541600 TSPY10P0CW01 314 aa9.22□□□□□ -0.93
EPHA4-214ENST00000541600 CCDC141Q6ZP82 1450 aa9.21□□□□□ -0.93
EPHA4-214ENST00000541600 RALGAPBQ86X10 1494 aa9.21□□□□□ -0.93
EPHA4-214ENST00000541600 AGLP35573 1532 aa9.21□□□□□ -0.93
EPHA4-214ENST00000541600 LRRC7Q96NW7 1537 aa9.21□□□□□ -0.93
EPHA4-214ENST00000541600 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.21□□□□□ -0.94
EPHA4-214ENST00000541600 TRPC6Q9Y210 931 aa9.21□□□□□ -0.94
EPHA4-214ENST00000541600 SAMD9LQ8IVG5 1584 aa9.2□□□□□ -0.94
EPHA4-214ENST00000541600 REREQ9P2R6 1566 aa9.2□□□□□ -0.94
EPHA4-214ENST00000541600 ABCA6Q8N139 1617 aa9.2□□□□□ -0.94
EPHA4-214ENST00000541600 GRXCR2A6NFK2 248 aa9.2□□□□□ -0.94
EPHA4-214ENST00000541600 C11orf95C9JLR9 678 aaPredicted RBP9.2□□□□□ -0.94
EPHA4-214ENST00000541600 HIC1Q14526 733 aa9.2□□□□□ -0.94
EPHA4-214ENST00000541600 PRKRIP1Q9H875 184 aaPredicted RBP9.2□□□□□ -0.94
EPHA4-214ENST00000541600 ROCK2O75116 1388 aaKnown RBP9.2□□□□□ -0.94
EPHA4-214ENST00000541600 UNC13BO14795 1591 aa9.2□□□□□ -0.94
EPHA4-214ENST00000541600 PLXNC1O60486 1568 aa9.2□□□□□ -0.94
EPHA4-214ENST00000541600 KDM5CP41229 1560 aa9.2□□□□□ -0.94
EPHA4-214ENST00000541600 CEP170BQ9Y4F5 1589 aaPredicted RBP9.2□□□□□ -0.94
EPHA4-214ENST00000541600 PDIA4P13667 645 aaKnown RBP9.19□□□□□ -0.94
EPHA4-214ENST00000541600 OSBPP22059 807 aa9.19□□□□□ -0.94
EPHA4-214ENST00000541600 TMC2Q8TDI7 906 aa9.19□□□□□ -0.94
EPHA4-214ENST00000541600 CFAP74Q9C0B2 1584 aa9.19□□□□□ -0.94
EPHA4-214ENST00000541600 TRAK2O60296 914 aa9.18□□□□□ -0.94
EPHA4-214ENST00000541600 NUP155O75694 1391 aa9.18□□□□□ -0.94
EPHA4-214ENST00000541600 ZNF142P52746 1687 aaPredicted RBP9.18□□□□□ -0.94
EPHA4-214ENST00000541600 KIF7Q2M1P5 1343 aa9.18□□□□□ -0.94
EPHA4-214ENST00000541600 KTN1Q86UP2 1357 aaKnown RBP9.18□□□□□ -0.94
EPHA4-214ENST00000541600 MYO3AQ8NEV4 1616 aa9.18□□□□□ -0.94
EPHA4-214ENST00000541600 KIF15Q9NS87 1388 aa9.18□□□□□ -0.94
EPHA4-214ENST00000541600 FCHSD2O94868 740 aa9.17□□□□□ -0.94
EPHA4-214ENST00000541600 CD44P16070 742 aaKnown RBP9.17□□□□□ -0.94
EPHA4-214ENST00000541600 FECHP22830 423 aa9.17□□□□□ -0.94
EPHA4-214ENST00000541600 TTLL12Q14166 644 aaPredicted RBP9.17□□□□□ -0.94
EPHA4-214ENST00000541600 PLPP6Q8IY26 295 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms