RNA–Protein interactions for RNA: ENST00000541591.5

SUDS3-203, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

TSL 3

Gene SUDS3, Length 561 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-203ENST00000541591 SPATA31A6Q5VVP1 1343 aa20.78■□□□□ 0.92
SUDS3-203ENST00000541591 NUTM2FA1L443 756 aa20.77■□□□□ 0.92
SUDS3-203ENST00000541591 MARF1Q9Y4F3 1742 aaKnown RBP20.76■□□□□ 0.91
SUDS3-203ENST00000541591 MYOM2P54296 1465 aa20.75■□□□□ 0.91
SUDS3-203ENST00000541591 LRPPRCP42704 1394 aaKnown RBP20.74■□□□□ 0.91
SUDS3-203ENST00000541591 PNPLA6Q8IY17 1366 aa20.74■□□□□ 0.91
SUDS3-203ENST00000541591 YTHDC2Q9H6S0 1430 aaKnown RBP20.74■□□□□ 0.91
SUDS3-203ENST00000541591 TECPR2O15040 1411 aa20.73■□□□□ 0.91
SUDS3-203ENST00000541591 NRXN1Q9ULB1 1477 aa20.73■□□□□ 0.91
SUDS3-203ENST00000541591 CFAP70Q5T0N1 1121 aa20.71■□□□□ 0.91
SUDS3-203ENST00000541591 COL22A1Q8NFW1 1626 aaPredicted RBP20.71■□□□□ 0.91
SUDS3-203ENST00000541591 XPCQ01831 940 aaPredicted RBP20.7■□□□□ 0.9
SUDS3-203ENST00000541591 KIF1AQ12756 1690 aa20.7■□□□□ 0.9
SUDS3-203ENST00000541591 LRRC59Q96AG4 307 aaKnown RBP20.69■□□□□ 0.9
SUDS3-203ENST00000541591 SAFB2Q14151 953 aaKnown RBP eCLIP20.68■□□□□ 0.9
SUDS3-203ENST00000541591 ESCO1Q5FWF5 840 aa20.68■□□□□ 0.9
SUDS3-203ENST00000541591 AFF2P51816 1311 aa20.68■□□□□ 0.9
SUDS3-203ENST00000541591 USP32Q8NFA0 1604 aa20.67■□□□□ 0.9
SUDS3-203ENST00000541591 ARHGEF28Q8N1W1 1705 aaKnown RBP20.67■□□□□ 0.9
SUDS3-203ENST00000541591 C8orf37Q96NL8 207 aa20.67■□□□□ 0.9
SUDS3-203ENST00000541591 KDM2AQ9Y2K7 1162 aa20.67■□□□□ 0.9
SUDS3-203ENST00000541591 ABCC11Q96J66 1382 aa20.67■□□□□ 0.9
SUDS3-203ENST00000541591 PXDNQ92626 1479 aa20.67■□□□□ 0.9
SUDS3-203ENST00000541591 ADAMTS2O95450 1211 aa20.66■□□□□ 0.9
SUDS3-203ENST00000541591 ADGRB1O14514 1584 aa20.65■□□□□ 0.9
SUDS3-203ENST00000541591 C14orf93Q9H972 538 aaKnown RBP20.65■□□□□ 0.9
SUDS3-203ENST00000541591 SOS2Q07890 1332 aaPredicted RBP20.64■□□□□ 0.89
SUDS3-203ENST00000541591 ABCA3Q99758 1704 aa20.64■□□□□ 0.89
SUDS3-203ENST00000541591 ZNF772Q68DY9 489 aaPredicted RBP20.63■□□□□ 0.89
SUDS3-203ENST00000541591 DHX57Q6P158 1386 aaKnown RBP20.62■□□□□ 0.89
SUDS3-203ENST00000541591 ACIN1Q9UKV3 1341 aaKnown RBP20.62■□□□□ 0.89
SUDS3-203ENST00000541591 FOXO3O43524 673 aa20.61■□□□□ 0.89
SUDS3-203ENST00000541591 DCAF11Q8TEB1 546 aa20.61■□□□□ 0.89
SUDS3-203ENST00000541591 DLC1Q96QB1 1528 aa20.6■□□□□ 0.89
SUDS3-203ENST00000541591 PRAM1Q96QH2 718 aa20.6■□□□□ 0.89
SUDS3-203ENST00000541591 PLEKHG5O94827 1062 aa20.59■□□□□ 0.89
SUDS3-203ENST00000541591 ADGRB2O60241 1585 aa20.59■□□□□ 0.89
SUDS3-203ENST00000541591 TRAK1Q9UPV9 953 aa20.58■□□□□ 0.89
SUDS3-203ENST00000541591 NPHP3Q7Z494 1330 aa20.57■□□□□ 0.88
SUDS3-203ENST00000541591 NGLY1Q96IV0 654 aa20.56■□□□□ 0.88
SUDS3-203ENST00000541591 HIRIP3Q9BW71 556 aaPredicted RBP20.56■□□□□ 0.88
SUDS3-203ENST00000541591 TRPM3Q9HCF6 1732 aaPredicted RBP20.56■□□□□ 0.88
SUDS3-203ENST00000541591 PLCH1Q4KWH8 1693 aa20.55■□□□□ 0.88
SUDS3-203ENST00000541591 RGS12O14924 1447 aa20.55■□□□□ 0.88
SUDS3-203ENST00000541591 RXRBP28702 533 aa20.55■□□□□ 0.88
SUDS3-203ENST00000541591 POGKQ9P215 609 aa20.55■□□□□ 0.88
SUDS3-203ENST00000541591 ITSN1Q15811 1721 aa20.55■□□□□ 0.88
SUDS3-203ENST00000541591 MINK1Q8N4C8 1332 aaPredicted RBP20.53■□□□□ 0.88
SUDS3-203ENST00000541591 KIAA1210Q9ULL0 1709 aa20.53■□□□□ 0.88
SUDS3-203ENST00000541591 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.53■□□□□ 0.88
SUDS3-203ENST00000541591 QTRT2Q9H974 415 aaKnown RBP20.52■□□□□ 0.88
SUDS3-203ENST00000541591 BRWD3Q6RI45 1802 aa20.51■□□□□ 0.87
SUDS3-203ENST00000541591 PMFBP1Q8TBY8 1022 aa20.5■□□□□ 0.87
SUDS3-203ENST00000541591 USP21Q9UK80 565 aa20.5■□□□□ 0.87
SUDS3-203ENST00000541591 PHF8Q9UPP1 1060 aa20.5■□□□□ 0.87
SUDS3-203ENST00000541591 ALS2Q96Q42 1657 aa20.49■□□□□ 0.87
SUDS3-203ENST00000541591 HRCP23327 699 aa20.49■□□□□ 0.87
SUDS3-203ENST00000541591 KRT28Q7Z3Y7 464 aa20.49■□□□□ 0.87
SUDS3-203ENST00000541591 SIRT1Q96EB6 747 aa20.49■□□□□ 0.87
SUDS3-203ENST00000541591 CDK12Q9NYV4 1490 aaPredicted RBP20.49■□□□□ 0.87
SUDS3-203ENST00000541591 CRYBG1Q9Y4K1 1723 aa20.48■□□□□ 0.87
SUDS3-203ENST00000541591 TULP4Q9NRJ4 1543 aa20.48■□□□□ 0.87
SUDS3-203ENST00000541591 TNS3Q68CZ2 1445 aa20.47■□□□□ 0.87
SUDS3-203ENST00000541591 QRICH2Q9H0J4 1663 aa20.47■□□□□ 0.87
SUDS3-203ENST00000541591 SPATA31A3Q5VYP0 1347 aa20.47■□□□□ 0.87
SUDS3-203ENST00000541591 TOPAZ1Q8N9V7 1692 aa20.46■□□□□ 0.87
SUDS3-203ENST00000541591 LMOD2Q6P5Q4 547 aa20.46■□□□□ 0.87
SUDS3-203ENST00000541591 CABLES1Q8TDN4 633 aa20.46■□□□□ 0.87
SUDS3-203ENST00000541591 PRR36Q9H6K5 1346 aa20.46■□□□□ 0.87
SUDS3-203ENST00000541591 RBM6P78332 1123 aaKnown RBP20.45■□□□□ 0.86
SUDS3-203ENST00000541591 UPF1Q92900 1129 aaKnown RBP eCLIP20.45■□□□□ 0.86
SUDS3-203ENST00000541591 ATRNO75882 1429 aa20.44■□□□□ 0.86
SUDS3-203ENST00000541591 ANKARQ7Z5J8 1434 aa20.44■□□□□ 0.86
SUDS3-203ENST00000541591 BCL9LQ86UU0 1499 aa20.43■□□□□ 0.86
SUDS3-203ENST00000541591 GLI3P10071 1580 aa20.43■□□□□ 0.86
SUDS3-203ENST00000541591 NWD2Q9ULI1 1742 aa20.43■□□□□ 0.86
SUDS3-203ENST00000541591 NRAPQ86VF7 1730 aa20.42■□□□□ 0.86
SUDS3-203ENST00000541591 PSME1Q06323 249 aa20.41■□□□□ 0.86
SUDS3-203ENST00000541591 FNBP4Q8N3X1 1017 aaPredicted RBP20.41■□□□□ 0.86
SUDS3-203ENST00000541591 TRPM1Q7Z4N2 1603 aa20.41■□□□□ 0.86
SUDS3-203ENST00000541591 ATP7BP35670 1465 aa20.4■□□□□ 0.86
SUDS3-203ENST00000541591 HAP1P54257 671 aaPredicted RBP20.4■□□□□ 0.86
SUDS3-203ENST00000541591 PHRF1Q9P1Y6 1649 aaKnown RBP20.4■□□□□ 0.86
SUDS3-203ENST00000541591 TRPC5Q9UL62 973 aaPredicted RBP20.4■□□□□ 0.86
SUDS3-203ENST00000541591 NBPF1Q3BBV0 1214 aa20.39■□□□□ 0.85
SUDS3-203ENST00000541591 WASLO00401 505 aaPredicted RBP20.38■□□□□ 0.85
SUDS3-203ENST00000541591 SIN3AQ96ST3 1273 aa20.38■□□□□ 0.85
SUDS3-203ENST00000541591 SLIT2O94813 1529 aa20.37■□□□□ 0.85
SUDS3-203ENST00000541591 SBNO1A3KN83 1393 aa20.37■□□□□ 0.85
SUDS3-203ENST00000541591 COL14A1Q05707 1796 aaKnown RBP20.35■□□□□ 0.85
SUDS3-203ENST00000541591 RALGAPBQ86X10 1494 aa20.34■□□□□ 0.85
SUDS3-203ENST00000541591 EIF3AQ14152 1382 aaKnown RBP20.34■□□□□ 0.85
SUDS3-203ENST00000541591 NEUROD1Q13562 356 aa20.33■□□□□ 0.85
SUDS3-203ENST00000541591 ARHGEF10O15013 1369 aa20.33■□□□□ 0.84
SUDS3-203ENST00000541591 PAK3O75914 559 aaPredicted RBP20.32■□□□□ 0.84
SUDS3-203ENST00000541591 NGDNQ8NEJ9 315 aaKnown RBP20.32■□□□□ 0.84
SUDS3-203ENST00000541591 STAC3Q96MF2 364 aa20.32■□□□□ 0.84
SUDS3-203ENST00000541591 EP400Q96L91 3159 aa20.32■□□□□ 0.84
SUDS3-203ENST00000541591 GPRASP1Q5JY77 1395 aa20.32■□□□□ 0.84
SUDS3-203ENST00000541591 NUDT16Q96DE0 195 aaKnown RBP20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms