RNA–Protein interactions for RNA: ENST00000541589.5

LMO3-226, Transcript of LIM domain only 3, humanhuman

TSL 2

Gene LMO3, Length 1,499 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-226ENST00000541589 BRINP3Q76B58 766 aa11.98□□□□□ -0.49
LMO3-226ENST00000541589 RRP7BPQ9NSQ0 103 aa11.98□□□□□ -0.49
LMO3-226ENST00000541589 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.97□□□□□ -0.49
LMO3-226ENST00000541589 NUTM2BA6NNL0 878 aaPredicted RBP11.97□□□□□ -0.49
LMO3-226ENST00000541589 NUTM2EB1AL46 878 aaPredicted RBP11.97□□□□□ -0.49
LMO3-226ENST00000541589 RBM6P78332 1123 aaKnown RBP11.97□□□□□ -0.49
LMO3-226ENST00000541589 NUTM2AQ8IVF1 878 aaPredicted RBP11.97□□□□□ -0.49
LMO3-226ENST00000541589 BCANQ96GW7 911 aa11.97□□□□□ -0.49
LMO3-226ENST00000541589 ABCC5O15440 1437 aa11.96□□□□□ -0.49
LMO3-226ENST00000541589 QTRT2Q9H974 415 aaKnown RBP11.96□□□□□ -0.49
LMO3-226ENST00000541589 HFM1A2PYH4 1435 aa11.96□□□□□ -0.5
LMO3-226ENST00000541589 ATF3P18847 181 aa11.95□□□□□ -0.5
LMO3-226ENST00000541589 ADAMTS13Q76LX8 1427 aa11.95□□□□□ -0.5
LMO3-226ENST00000541589 RIMS2Q9UQ26 1411 aa11.95□□□□□ -0.5
LMO3-226ENST00000541589 CD44P16070 742 aaKnown RBP11.95□□□□□ -0.5
LMO3-226ENST00000541589 C14orf37Q86TY3 774 aa11.95□□□□□ -0.5
LMO3-226ENST00000541589 PIK3R4Q99570 1358 aa11.94□□□□□ -0.5
LMO3-226ENST00000541589 CROCC2H7BZ55 1655 aa11.93□□□□□ -0.5
LMO3-226ENST00000541589 POTEMA6NI47 508 aa11.93□□□□□ -0.5
LMO3-226ENST00000541589 HDGFP51858 240 aaKnown RBP11.93□□□□□ -0.5
LMO3-226ENST00000541589 NUTM2DQ5VT03 806 aaPredicted RBP11.93□□□□□ -0.5
LMO3-226ENST00000541589 ATAD2Q6PL18 1390 aa11.93□□□□□ -0.5
LMO3-226ENST00000541589 DCCP43146 1447 aa11.93□□□□□ -0.5
LMO3-226ENST00000541589 ASXL1Q8IXJ9 1541 aa11.92□□□□□ -0.5
LMO3-226ENST00000541589 PPP1R15AO75807 674 aaPredicted RBP11.92□□□□□ -0.5
LMO3-226ENST00000541589 C8orf37Q96NL8 207 aa11.92□□□□□ -0.5
LMO3-226ENST00000541589 ZRANB1Q9UGI0 708 aa11.92□□□□□ -0.5
LMO3-226ENST00000541589 RPRD2Q5VT52 1461 aaKnown RBP11.92□□□□□ -0.5
LMO3-226ENST00000541589 SETBP1Q9Y6X0 1596 aa11.92□□□□□ -0.5
LMO3-226ENST00000541589 MIER1Q8N108 512 aa11.91□□□□□ -0.5
LMO3-226ENST00000541589 LRRC59Q96AG4 307 aaKnown RBP11.91□□□□□ -0.5
LMO3-226ENST00000541589 PNPLA6Q8IY17 1366 aa11.91□□□□□ -0.5
LMO3-226ENST00000541589 DAPK1P53355 1430 aa11.91□□□□□ -0.5
LMO3-226ENST00000541589 NAIPQ13075 1403 aa11.91□□□□□ -0.5
LMO3-226ENST00000541589 TMEM131LA2VDJ0 1609 aa11.91□□□□□ -0.5
LMO3-226ENST00000541589 MST1RQ04912 1400 aa11.9□□□□□ -0.5
LMO3-226ENST00000541589 NHSL1Q5SYE7 1610 aa11.9□□□□□ -0.5
LMO3-226ENST00000541589 GCC2Q8IWJ2 1684 aa11.9□□□□□ -0.5
LMO3-226ENST00000541589 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.9□□□□□ -0.5
LMO3-226ENST00000541589 PTPRUQ92729 1446 aa11.9□□□□□ -0.5
LMO3-226ENST00000541589 NGLY1Q96IV0 654 aa11.89□□□□□ -0.51
LMO3-226ENST00000541589 MYO5BQ9ULV0 1848 aa11.89□□□□□ -0.51
LMO3-226ENST00000541589 ROCK1Q13464 1354 aa11.89□□□□□ -0.51
LMO3-226ENST00000541589 AMOTL2Q9Y2J4 779 aa11.89□□□□□ -0.51
LMO3-226ENST00000541589 ANKRD30AQ9BXX3 1397 aa11.88□□□□□ -0.51
LMO3-226ENST00000541589 EP400Q96L91 3159 aa11.87□□□□□ -0.51
LMO3-226ENST00000541589 POTEGQ6S5H5 508 aa11.86□□□□□ -0.51
LMO3-226ENST00000541589 CCDC125Q86Z20 511 aa11.86□□□□□ -0.51
LMO3-226ENST00000541589 DDX17Q92841 729 aaKnown RBP11.86□□□□□ -0.51
LMO3-226ENST00000541589 FBXO3Q9UK99 471 aa11.86□□□□□ -0.51
LMO3-226ENST00000541589 TRPM2O94759 1503 aa11.86□□□□□ -0.51
LMO3-226ENST00000541589 ACIN1Q9UKV3 1341 aaKnown RBP11.85□□□□□ -0.51
LMO3-226ENST00000541589 FNBP4Q8N3X1 1017 aaPredicted RBP11.85□□□□□ -0.51
LMO3-226ENST00000541589 USP21Q9UK80 565 aa11.84□□□□□ -0.51
LMO3-226ENST00000541589 CHIC2Q9UKJ5 165 aa11.84□□□□□ -0.51
LMO3-226ENST00000541589 TRPC5Q9UL62 973 aaPredicted RBP11.84□□□□□ -0.51
LMO3-226ENST00000541589 ADGRL2O95490 1459 aa11.84□□□□□ -0.51
LMO3-226ENST00000541589 ADAMTS2O95450 1211 aa11.83□□□□□ -0.52
LMO3-226ENST00000541589 PLCD3Q8N3E9 789 aa11.83□□□□□ -0.52
LMO3-226ENST00000541589 ATRNO75882 1429 aa11.83□□□□□ -0.52
LMO3-226ENST00000541589 XRN1Q8IZH2 1706 aaKnown RBP11.83□□□□□ -0.52
LMO3-226ENST00000541589 PLEKHG5O94827 1062 aa11.83□□□□□ -0.52
LMO3-226ENST00000541589 UNC13BO14795 1591 aa11.82□□□□□ -0.52
LMO3-226ENST00000541589 LAMC1P11047 1609 aa11.81□□□□□ -0.52
LMO3-226ENST00000541589 PTCH1Q13635 1447 aa11.81□□□□□ -0.52
LMO3-226ENST00000541589 ADGRL3Q9HAR2 1447 aa11.81□□□□□ -0.52
LMO3-226ENST00000541589 CHGAP10645 457 aaKnown RBP11.81□□□□□ -0.52
LMO3-226ENST00000541589 SOS2Q07890 1332 aaPredicted RBP11.8□□□□□ -0.52
LMO3-226ENST00000541589 NRXN3Q9Y4C0 1643 aa11.8□□□□□ -0.52
LMO3-226ENST00000541589 ZNF579Q8NAF0 562 aaKnown RBP11.8□□□□□ -0.52
LMO3-226ENST00000541589 ANKRD50Q9ULJ7 1429 aa11.79□□□□□ -0.52
LMO3-226ENST00000541589 C1orf167Q5SNV9 1468 aa11.79□□□□□ -0.52
LMO3-226ENST00000541589 OTUD5Q96G74 571 aa11.79□□□□□ -0.52
LMO3-226ENST00000541589 BCL9LQ86UU0 1499 aa11.78□□□□□ -0.52
LMO3-226ENST00000541589 METP08581 1390 aa11.78□□□□□ -0.52
LMO3-226ENST00000541589 LRP5O75197 1615 aa11.77□□□□□ -0.53
LMO3-226ENST00000541589 TIMELESSQ9UNS1 1208 aa11.76□□□□□ -0.53
LMO3-226ENST00000541589 BLMP54132 1417 aaPredicted RBP11.76□□□□□ -0.53
LMO3-226ENST00000541589 E9PCH4 1651 aa11.76□□□□□ -0.53
LMO3-226ENST00000541589 NALCNQ8IZF0 1738 aa11.76□□□□□ -0.53
LMO3-226ENST00000541589 COL22A1Q8NFW1 1626 aaPredicted RBP11.75□□□□□ -0.53
LMO3-226ENST00000541589 MYOM2P54296 1465 aa11.75□□□□□ -0.53
LMO3-226ENST00000541589 PAK3O75914 559 aaPredicted RBP11.75□□□□□ -0.53
LMO3-226ENST00000541589 GJD4Q96KN9 370 aaPredicted RBP11.75□□□□□ -0.53
LMO3-226ENST00000541589 ORAI2Q96SN7 254 aa11.75□□□□□ -0.53
LMO3-226ENST00000541589 VASPP50552 380 aaPredicted RBP11.74□□□□□ -0.53
LMO3-226ENST00000541589 DEFB132Q7Z7B7 95 aa11.73□□□□□ -0.53
LMO3-226ENST00000541589 ZNF316A6NFI3 1004 aaPredicted RBP11.72□□□□□ -0.53
LMO3-226ENST00000541589 CLCN6P51797 869 aa11.72□□□□□ -0.53
LMO3-226ENST00000541589 PCDH10Q9P2E7 1040 aa11.72□□□□□ -0.53
LMO3-226ENST00000541589 ZBTB47Q9UFB7 747 aaPredicted RBP11.72□□□□□ -0.53
LMO3-226ENST00000541589 IQGAP3Q86VI3 1631 aa11.72□□□□□ -0.53
LMO3-226ENST00000541589 RASEFQ8IZ41 740 aa11.71□□□□□ -0.53
LMO3-226ENST00000541589 PHF12Q96QT6 1004 aa11.71□□□□□ -0.53
LMO3-226ENST00000541589 SIN3AQ96ST3 1273 aa11.71□□□□□ -0.53
LMO3-226ENST00000541589 MPHOSPH9Q99550 1183 aa11.7□□□□□ -0.54
LMO3-226ENST00000541589 GLI3P10071 1580 aa11.7□□□□□ -0.54
LMO3-226ENST00000541589 NEUROD1Q13562 356 aa11.7□□□□□ -0.54
LMO3-226ENST00000541589 TSPYL2Q9H2G4 693 aaPredicted RBP11.7□□□□□ -0.54
LMO3-226ENST00000541589 RALGAPBQ86X10 1494 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms