RNA–Protein interactions for RNA: ENST00000541171.1

LEMD3-203, Transcript of LEM domain containing 3, humanhuman

TSL 2

Gene LEMD3, Length 856 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-203ENST00000541171 ESCO1Q5FWF5 840 aa35.73■■■■□ 3.31
LEMD3-203ENST00000541171 WAPLQ7Z5K2 1190 aa35.72■■■■□ 3.31
LEMD3-203ENST00000541171 ANKRD30BQ9BXX2 1392 aa35.72■■■■□ 3.31
LEMD3-203ENST00000541171 TMEM132EQ6IEE7 984 aa35.71■■■■□ 3.31
LEMD3-203ENST00000541171 LAMC1P11047 1609 aa35.7■■■■□ 3.31
LEMD3-203ENST00000541171 CDK12Q9NYV4 1490 aaPredicted RBP35.69■■■■□ 3.3
LEMD3-203ENST00000541171 NUTM2FA1L443 756 aa35.68■■■■□ 3.3
LEMD3-203ENST00000541171 RBM6P78332 1123 aaKnown RBP35.68■■■■□ 3.3
LEMD3-203ENST00000541171 LRPPRCP42704 1394 aaKnown RBP35.66■■■■□ 3.3
LEMD3-203ENST00000541171 CDC42BPGQ6DT37 1551 aa35.64■■■■□ 3.3
LEMD3-203ENST00000541171 NPHP3Q7Z494 1330 aa35.64■■■■□ 3.3
LEMD3-203ENST00000541171 XPCQ01831 940 aaPredicted RBP35.64■■■■□ 3.3
LEMD3-203ENST00000541171 FOXO3O43524 673 aa35.63■■■■□ 3.29
LEMD3-203ENST00000541171 PLEKHH1Q9ULM0 1364 aa35.62■■■■□ 3.29
LEMD3-203ENST00000541171 IFT172Q9UG01 1749 aa35.61■■■■□ 3.29
LEMD3-203ENST00000541171 TECPR2O15040 1411 aa35.61■■■■□ 3.29
LEMD3-203ENST00000541171 USP21Q9UK80 565 aa35.61■■■■□ 3.29
LEMD3-203ENST00000541171 ABCC11Q96J66 1382 aa35.61■■■■□ 3.29
LEMD3-203ENST00000541171 RGS12O14924 1447 aa35.6■■■■□ 3.29
LEMD3-203ENST00000541171 PIK3C2GO75747 1445 aa35.6■■■■□ 3.29
LEMD3-203ENST00000541171 YTHDC2Q9H6S0 1430 aaKnown RBP35.56■■■■□ 3.28
LEMD3-203ENST00000541171 PXDNQ92626 1479 aa35.54■■■■□ 3.28
LEMD3-203ENST00000541171 ACIN1Q9UKV3 1341 aaKnown RBP35.54■■■■□ 3.28
LEMD3-203ENST00000541171 TRPC5Q9UL62 973 aaPredicted RBP35.53■■■■□ 3.28
LEMD3-203ENST00000541171 FNBP4Q8N3X1 1017 aaPredicted RBP35.52■■■■□ 3.28
LEMD3-203ENST00000541171 C14orf93Q9H972 538 aaKnown RBP35.52■■■■□ 3.28
LEMD3-203ENST00000541171 COL22A1Q8NFW1 1626 aaPredicted RBP35.52■■■■□ 3.28
LEMD3-203ENST00000541171 CFAP70Q5T0N1 1121 aa35.51■■■■□ 3.28
LEMD3-203ENST00000541171 KNDC1Q76NI1 1749 aa35.5■■■■□ 3.27
LEMD3-203ENST00000541171 MYOM2P54296 1465 aa35.49■■■■□ 3.27
LEMD3-203ENST00000541171 SIRT1Q96EB6 747 aa35.46■■■■□ 3.27
LEMD3-203ENST00000541171 DHX57Q6P158 1386 aaKnown RBP35.46■■■■□ 3.27
LEMD3-203ENST00000541171 RAB3GAP2Q9H2M9 1393 aa35.44■■■■□ 3.26
LEMD3-203ENST00000541171 SAFB2Q14151 953 aaKnown RBP eCLIP35.44■■■■□ 3.26
LEMD3-203ENST00000541171 FMN2Q9NZ56 1722 aa35.43■■■■□ 3.26
LEMD3-203ENST00000541171 KRT28Q7Z3Y7 464 aa35.42■■■■□ 3.26
LEMD3-203ENST00000541171 ATRNO75882 1429 aa35.41■■■■□ 3.26
LEMD3-203ENST00000541171 NRXN1Q9ULB1 1477 aa35.41■■■■□ 3.26
LEMD3-203ENST00000541171 SPATA31A3Q5VYP0 1347 aa35.39■■■■□ 3.26
LEMD3-203ENST00000541171 PRAM1Q96QH2 718 aa35.39■■■■□ 3.26
LEMD3-203ENST00000541171 PHF8Q9UPP1 1060 aa35.37■■■■□ 3.25
LEMD3-203ENST00000541171 ATAD2Q6PL18 1390 aa35.37■■■■□ 3.25
LEMD3-203ENST00000541171 BCL9LQ86UU0 1499 aa35.36■■■■□ 3.25
LEMD3-203ENST00000541171 POGKQ9P215 609 aa35.35■■■■□ 3.25
LEMD3-203ENST00000541171 KIF1AQ12756 1690 aa35.34■■■■□ 3.25
LEMD3-203ENST00000541171 PLEKHG5O94827 1062 aa35.34■■■■□ 3.25
LEMD3-203ENST00000541171 MARF1Q9Y4F3 1742 aaKnown RBP35.32■■■■□ 3.24
LEMD3-203ENST00000541171 PSME1Q06323 249 aa35.31■■■■□ 3.24
LEMD3-203ENST00000541171 KDM2AQ9Y2K7 1162 aa35.31■■■■□ 3.24
LEMD3-203ENST00000541171 HAP1P54257 671 aaPredicted RBP35.3■■■■□ 3.24
LEMD3-203ENST00000541171 GJD4Q96KN9 370 aaPredicted RBP35.3■■■■□ 3.24
LEMD3-203ENST00000541171 RGPD8O14715 1765 aaPredicted RBP35.29■■■■□ 3.24
LEMD3-203ENST00000541171 LMOD2Q6P5Q4 547 aa35.28■■■■□ 3.24
LEMD3-203ENST00000541171 CABLES1Q8TDN4 633 aa35.27■■■■□ 3.24
LEMD3-203ENST00000541171 TRAK1Q9UPV9 953 aa35.27■■■■□ 3.24
LEMD3-203ENST00000541171 UNC5CLQ8IV45 518 aa35.26■■■■□ 3.24
LEMD3-203ENST00000541171 PMFBP1Q8TBY8 1022 aa35.26■■■■□ 3.24
LEMD3-203ENST00000541171 DCAF11Q8TEB1 546 aa35.25■■■■□ 3.23
LEMD3-203ENST00000541171 TNS3Q68CZ2 1445 aa35.24■■■■□ 3.23
LEMD3-203ENST00000541171 HIRIP3Q9BW71 556 aaPredicted RBP35.24■■■■□ 3.23
LEMD3-203ENST00000541171 DLC1Q96QB1 1528 aa35.22■■■■□ 3.23
LEMD3-203ENST00000541171 SLIT2O94813 1529 aa35.21■■■■□ 3.23
LEMD3-203ENST00000541171 MINK1Q8N4C8 1332 aaPredicted RBP35.2■■■■□ 3.23
LEMD3-203ENST00000541171 SBNO1A3KN83 1393 aa35.19■■■■□ 3.22
LEMD3-203ENST00000541171 ADGRB1O14514 1584 aa35.19■■■■□ 3.22
LEMD3-203ENST00000541171 USP32Q8NFA0 1604 aa35.18■■■■□ 3.22
LEMD3-203ENST00000541171 RALGAPBQ86X10 1494 aa35.16■■■■□ 3.22
LEMD3-203ENST00000541171 ANKARQ7Z5J8 1434 aa35.16■■■■□ 3.22
LEMD3-203ENST00000541171 TNKS1BP1Q9C0C2 1729 aaKnown RBP35.15■■■■□ 3.22
LEMD3-203ENST00000541171 ARHGEF10O15013 1369 aa35.14■■■■□ 3.22
LEMD3-203ENST00000541171 GLI3P10071 1580 aa35.13■■■■□ 3.21
LEMD3-203ENST00000541171 CCDC9Q9Y3X0 531 aaKnown RBP35.12■■■■□ 3.21
LEMD3-203ENST00000541171 ADGRB2O60241 1585 aa35.1■■■■□ 3.21
LEMD3-203ENST00000541171 PRR36Q9H6K5 1346 aa35.09■■■■□ 3.21
LEMD3-203ENST00000541171 CCDC125Q86Z20 511 aa35.09■■■■□ 3.21
LEMD3-203ENST00000541171 WASLO00401 505 aaPredicted RBP35.08■■■■□ 3.21
LEMD3-203ENST00000541171 HRCP23327 699 aa35.08■■■■□ 3.21
LEMD3-203ENST00000541171 VPS72Q15906 364 aa35.08■■■■□ 3.21
LEMD3-203ENST00000541171 STAC3Q96MF2 364 aa35.07■■■■□ 3.2
LEMD3-203ENST00000541171 GPRASP1Q5JY77 1395 aa35.07■■■■□ 3.2
LEMD3-203ENST00000541171 EIF3AQ14152 1382 aaKnown RBP35.06■■■■□ 3.2
LEMD3-203ENST00000541171 FAM83GA6ND36 823 aa35.06■■■■□ 3.2
LEMD3-203ENST00000541171 SEPT12Q8IYM1 358 aa35.06■■■■□ 3.2
LEMD3-203ENST00000541171 NGDNQ8NEJ9 315 aaKnown RBP35.03■■■■□ 3.2
LEMD3-203ENST00000541171 ZRANB1Q9UGI0 708 aa35.03■■■■□ 3.2
LEMD3-203ENST00000541171 EP400Q96L91 3159 aa35.03■■■■□ 3.2
LEMD3-203ENST00000541171 TULP4Q9NRJ4 1543 aa35.02■■■■□ 3.2
LEMD3-203ENST00000541171 PLCH1Q4KWH8 1693 aa35.01■■■■□ 3.2
LEMD3-203ENST00000541171 ABCA3Q99758 1704 aa35.01■■■■□ 3.2
LEMD3-203ENST00000541171 PAK3O75914 559 aaPredicted RBP35■■■■□ 3.19
LEMD3-203ENST00000541171 TRPM3Q9HCF6 1732 aaPredicted RBP34.98■■■■□ 3.19
LEMD3-203ENST00000541171 NWD2Q9ULI1 1742 aa34.97■■■■□ 3.19
LEMD3-203ENST00000541171 A0A0G2JS52 829 aa34.96■■■■□ 3.19
LEMD3-203ENST00000541171 MYT1Q01538 1121 aa34.96■■■■□ 3.19
LEMD3-203ENST00000541171 BTG4Q9NY30 223 aa34.96■■■■□ 3.19
LEMD3-203ENST00000541171 BRWD3Q6RI45 1802 aa34.95■■■■□ 3.19
LEMD3-203ENST00000541171 BLMP54132 1417 aaPredicted RBP34.95■■■■□ 3.19
LEMD3-203ENST00000541171 ONECUT3O60422 494 aaPredicted RBP34.94■■■■□ 3.18
LEMD3-203ENST00000541171 KRT27Q7Z3Y8 459 aa34.93■■■■□ 3.18
LEMD3-203ENST00000541171 NUDT16Q96DE0 195 aaKnown RBP34.93■■■■□ 3.18
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms