RNA–Protein interactions for RNA: ENST00000540918.2

TTC39C-203, Transcript of tetratricopeptide repeat domain 39C, humanhuman

TSL 2 BASIC

Gene TTC39C, Length 4,117 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-203ENST00000540918 ZRANB1Q9UGI0 708 aa12.03□□□□□ -0.48
TTC39C-203ENST00000540918 HSP90AB1P08238 724 aaKnown RBP12.03□□□□□ -0.48
TTC39C-203ENST00000540918 CTTNBP2Q8WZ74 1663 aa12.02□□□□□ -0.48
TTC39C-203ENST00000540918 DZIP1LQ8IYY4 767 aaKnown RBP12.02□□□□□ -0.49
TTC39C-203ENST00000540918 LNPKQ9C0E8 428 aa12.01□□□□□ -0.49
TTC39C-203ENST00000540918 NUTM2BA6NNL0 878 aaPredicted RBP12.01□□□□□ -0.49
TTC39C-203ENST00000540918 NUTM2EB1AL46 878 aaPredicted RBP12.01□□□□□ -0.49
TTC39C-203ENST00000540918 HSPA2P54652 639 aa12.01□□□□□ -0.49
TTC39C-203ENST00000540918 NUTM2AQ8IVF1 878 aaPredicted RBP12.01□□□□□ -0.49
TTC39C-203ENST00000540918 CHMP4BQ9H444 224 aaKnown RBP12.01□□□□□ -0.49
TTC39C-203ENST00000540918 CEP170Q5SW79 1584 aa12.01□□□□□ -0.49
TTC39C-203ENST00000540918 PIP4K2BP78356 416 aa12.01□□□□□ -0.49
TTC39C-203ENST00000540918 C20orf194Q5TEA3 1177 aa12.01□□□□□ -0.49
TTC39C-203ENST00000540918 ABCA5Q8WWZ7 1642 aa12□□□□□ -0.49
TTC39C-203ENST00000540918 PDE4AP27815 886 aa12□□□□□ -0.49
TTC39C-203ENST00000540918 RAPGEF4Q8WZA2 1011 aa12□□□□□ -0.49
TTC39C-203ENST00000540918 WDR7Q9Y4E6 1490 aa12□□□□□ -0.49
TTC39C-203ENST00000540918 KDM5BQ9UGL1 1544 aa12□□□□□ -0.49
TTC39C-203ENST00000540918 ANP32EQ9BTT0 268 aa12□□□□□ -0.49
TTC39C-203ENST00000540918 C14orf93Q9H972 538 aaKnown RBP12□□□□□ -0.49
TTC39C-203ENST00000540918 CFAP65Q6ZU64 1925 aaKnown RBP11.99□□□□□ -0.49
TTC39C-203ENST00000540918 MCM10Q7L590 875 aa11.99□□□□□ -0.49
TTC39C-203ENST00000540918 DDX54Q8TDD1 881 aaKnown RBP11.99□□□□□ -0.49
TTC39C-203ENST00000540918 RPGRIP1LQ68CZ1 1315 aa11.99□□□□□ -0.49
TTC39C-203ENST00000540918 TARBP1Q13395 1621 aaKnown RBP11.99□□□□□ -0.49
TTC39C-203ENST00000540918 RILPL2Q969X0 211 aa11.98□□□□□ -0.49
TTC39C-203ENST00000540918 FAM177BA6PVY3 158 aa11.98□□□□□ -0.49
TTC39C-203ENST00000540918 AMER1Q5JTC6 1135 aaPredicted RBP11.98□□□□□ -0.49
TTC39C-203ENST00000540918 TTC5Q8N0Z6 440 aa11.97□□□□□ -0.49
TTC39C-203ENST00000540918 ERICH6BQ5W0A0 696 aa11.97□□□□□ -0.49
TTC39C-203ENST00000540918 GZF1Q9H116 711 aaPredicted RBP11.97□□□□□ -0.49
TTC39C-203ENST00000540918 RTN4Q9NQC3 1192 aaKnown RBP11.97□□□□□ -0.49
TTC39C-203ENST00000540918 FOXD4L5Q5VV16 416 aaPredicted RBP11.97□□□□□ -0.49
TTC39C-203ENST00000540918 AEBP2Q6ZN18 517 aaPredicted RBP11.97□□□□□ -0.49
TTC39C-203ENST00000540918 FOXD4L4Q8WXT5 416 aaPredicted RBP11.97□□□□□ -0.49
TTC39C-203ENST00000540918 TAF7LQ5H9L4 462 aa11.96□□□□□ -0.49
TTC39C-203ENST00000540918 TESK2Q96S53 571 aa11.96□□□□□ -0.49
TTC39C-203ENST00000540918 C9orf78Q9NZ63 289 aaPredicted RBP11.96□□□□□ -0.49
TTC39C-203ENST00000540918 WASLO00401 505 aaPredicted RBP11.96□□□□□ -0.5
TTC39C-203ENST00000540918 GTF2E1P29083 439 aaPredicted RBP11.96□□□□□ -0.5
TTC39C-203ENST00000540918 WWC1Q8IX03 1113 aa11.96□□□□□ -0.5
TTC39C-203ENST00000540918 GPRASP1Q5JY77 1395 aa11.96□□□□□ -0.5
TTC39C-203ENST00000540918 A2MP01023 1474 aa11.96□□□□□ -0.5
TTC39C-203ENST00000540918 GNAI1P63096 354 aa11.96□□□□□ -0.5
TTC39C-203ENST00000540918 GORABQ5T7V8 394 aa11.96□□□□□ -0.5
TTC39C-203ENST00000540918 NOB1Q9ULX3 412 aaKnown RBP11.96□□□□□ -0.5
TTC39C-203ENST00000540918 FAM83GA6ND36 823 aa11.95□□□□□ -0.5
TTC39C-203ENST00000540918 PBRM1Q86U86 1689 aa11.95□□□□□ -0.5
TTC39C-203ENST00000540918 TWISTNBQ3B726 338 aaPredicted RBP11.95□□□□□ -0.5
TTC39C-203ENST00000540918 FOXD4L6Q3SYB3 417 aaPredicted RBP11.95□□□□□ -0.5
TTC39C-203ENST00000540918 FOXD4L3Q6VB84 417 aaPredicted RBP11.95□□□□□ -0.5
TTC39C-203ENST00000540918 ANP32BQ92688 251 aaKnown RBP11.95□□□□□ -0.5
TTC39C-203ENST00000540918 HSCBQ8IWL3 235 aa11.94□□□□□ -0.5
TTC39C-203ENST00000540918 CENPQQ7L2Z9 268 aaPredicted RBP11.94□□□□□ -0.5
TTC39C-203ENST00000540918 TULP1O00294 542 aaPredicted RBP11.94□□□□□ -0.5
TTC39C-203ENST00000540918 CARD14Q9BXL6 1004 aa11.94□□□□□ -0.5
TTC39C-203ENST00000540918 SLC4A2P04920 1241 aa11.93□□□□□ -0.5
TTC39C-203ENST00000540918 PLCB2Q00722 1185 aa11.93□□□□□ -0.5
TTC39C-203ENST00000540918 ZNF692Q9BU19 519 aaPredicted RBP11.93□□□□□ -0.5
TTC39C-203ENST00000540918 ABCC2Q92887 1545 aa11.93□□□□□ -0.5
TTC39C-203ENST00000540918 TMPOP42166 694 aaKnown RBP11.93□□□□□ -0.5
TTC39C-203ENST00000540918 FAM135AQ9P2D6 1515 aa11.93□□□□□ -0.5
TTC39C-203ENST00000540918 EIF5BO60841 1220 aaKnown RBP11.93□□□□□ -0.5
TTC39C-203ENST00000540918 PRDM11Q9NQV5 511 aa11.93□□□□□ -0.5
TTC39C-203ENST00000540918 HMMRO75330 724 aa11.92□□□□□ -0.5
TTC39C-203ENST00000540918 TOM1L2Q6ZVM7 507 aa11.92□□□□□ -0.5
TTC39C-203ENST00000540918 MSH5O43196 834 aa11.92□□□□□ -0.5
TTC39C-203ENST00000540918 ZNF530Q6P9A1 599 aaPredicted RBP11.92□□□□□ -0.5
TTC39C-203ENST00000540918 PZPP20742 1482 aa11.92□□□□□ -0.5
TTC39C-203ENST00000540918 CHRNA2Q15822 529 aa11.92□□□□□ -0.5
TTC39C-203ENST00000540918 HSP90AB2PQ58FF8 381 aa11.92□□□□□ -0.5
TTC39C-203ENST00000540918 DDX19BQ9UMR2 479 aa11.92□□□□□ -0.5
TTC39C-203ENST00000540918 ERCC6L2Q5T890 1561 aa11.92□□□□□ -0.5
TTC39C-203ENST00000540918 KIAA1211Q6ZU35 1233 aa11.92□□□□□ -0.5
TTC39C-203ENST00000540918 FYB1O15117 783 aa11.91□□□□□ -0.5
TTC39C-203ENST00000540918 ACEP12821 1306 aa11.91□□□□□ -0.5
TTC39C-203ENST00000540918 MYL6BP14649 208 aa11.9□□□□□ -0.5
TTC39C-203ENST00000540918 CABLES1Q8TDN4 633 aa11.9□□□□□ -0.5
TTC39C-203ENST00000540918 RBM42Q9BTD8 480 aaKnown RBP11.9□□□□□ -0.5
TTC39C-203ENST00000540918 POGZQ7Z3K3 1410 aa11.9□□□□□ -0.5
TTC39C-203ENST00000540918 TCOF1Q13428 1488 aaKnown RBP11.9□□□□□ -0.5
TTC39C-203ENST00000540918 ATAD2Q6PL18 1390 aa11.9□□□□□ -0.5
TTC39C-203ENST00000540918 PHF8Q9UPP1 1060 aa11.9□□□□□ -0.5
TTC39C-203ENST00000540918 ADAMTS2O95450 1211 aa11.89□□□□□ -0.51
TTC39C-203ENST00000540918 IPO9Q96P70 1041 aaKnown RBP11.89□□□□□ -0.51
TTC39C-203ENST00000540918 ISY1Q9ULR0 285 aaKnown RBP11.89□□□□□ -0.51
TTC39C-203ENST00000540918 ZNF518AQ6AHZ1 1483 aa11.89□□□□□ -0.51
TTC39C-203ENST00000540918 PRAG1Q86YV5 1406 aa11.89□□□□□ -0.51
TTC39C-203ENST00000540918 RIC3Q7Z5B4 369 aa11.88□□□□□ -0.51
TTC39C-203ENST00000540918 AEBP1Q8IUX7 1158 aa11.88□□□□□ -0.51
TTC39C-203ENST00000540918 GOLGA6L22H0YM25 854 aa11.88□□□□□ -0.51
TTC39C-203ENST00000540918 PTCD1O75127 700 aaKnown RBP11.88□□□□□ -0.51
TTC39C-203ENST00000540918 HDGFL1Q5TGJ6 251 aa11.88□□□□□ -0.51
TTC39C-203ENST00000540918 SCAF11Q99590 1463 aaKnown RBP11.88□□□□□ -0.51
TTC39C-203ENST00000540918 SLFN5Q08AF3 891 aa11.88□□□□□ -0.51
TTC39C-203ENST00000540918 MPRIPQ6WCQ1 1025 aa11.88□□□□□ -0.51
TTC39C-203ENST00000540918 API5Q9BZZ5 524 aaKnown RBP11.88□□□□□ -0.51
TTC39C-203ENST00000540918 KCNA6P17658 529 aa11.88□□□□□ -0.51
TTC39C-203ENST00000540918 FAM161AQ3B820 660 aa11.88□□□□□ -0.51
TTC39C-203ENST00000540918 MEX3CQ5U5Q3 659 aaKnown RBP11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms