RNA–Protein interactions for RNA: ENST00000540699.1

ATL3-204, Transcript of atlastin GTPase 3, humanhuman

TSL 3

Gene ATL3, Length 714 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-204ENST00000540699 POTEAQ6S8J7 498 aa15.13■□□□□ 0.01
ATL3-204ENST00000540699 ARHGEF28Q8N1W1 1705 aaKnown RBP15.13■□□□□ 0.01
ATL3-204ENST00000540699 SIRT1Q96EB6 747 aa15.13■□□□□ 0.01
ATL3-204ENST00000540699 SLAIN2Q9P270 581 aa15.13■□□□□ 0.01
ATL3-204ENST00000540699 RALGAPBQ86X10 1494 aa15.11■□□□□ 0.01
ATL3-204ENST00000540699 ADGRL3Q9HAR2 1447 aa15.1■□□□□ 0.01
ATL3-204ENST00000540699 NBPF8Q3BBV2 869 aa15.1■□□□□ 0.01
ATL3-204ENST00000540699 GPRASP1Q5JY77 1395 aa15.1■□□□□ 0.01
ATL3-204ENST00000540699 DCCP43146 1447 aa15.09■□□□□ 0.01
ATL3-204ENST00000540699 NBPF1Q3BBV0 1214 aa15.09■□□□□ 0.01
ATL3-204ENST00000540699 AHDC1Q5TGY3 1603 aaPredicted RBP15.09■□□□□ 0.01
ATL3-204ENST00000540699 STK26Q9P289 416 aa15.08■□□□□ 0
ATL3-204ENST00000540699 JCADQ9P266 1359 aa15.08■□□□□ 0
ATL3-204ENST00000540699 CDC42BPGQ6DT37 1551 aa15.07■□□□□ 0
ATL3-204ENST00000540699 SHPRHQ149N8 1683 aa15.07■□□□□ 0
ATL3-204ENST00000540699 ADGRB2O60241 1585 aa15.07■□□□□ 0
ATL3-204ENST00000540699 C19orf44Q9H6X5 657 aa15.06■□□□□ 0
ATL3-204ENST00000540699 PLEKHH1Q9ULM0 1364 aa15.06■□□□□ 0
ATL3-204ENST00000540699 C14orf37Q86TY3 774 aa15.05■□□□□ -0
ATL3-204ENST00000540699 ROCK2O75116 1388 aaKnown RBP15.04■□□□□ -0
ATL3-204ENST00000540699 WAPLQ7Z5K2 1190 aa15.04■□□□□ -0
ATL3-204ENST00000540699 CADPS2Q86UW7 1296 aa15.04■□□□□ -0
ATL3-204ENST00000540699 FMN2Q9NZ56 1722 aa15.03■□□□□ -0
ATL3-204ENST00000540699 LRP6O75581 1613 aa15.03■□□□□ -0
ATL3-204ENST00000540699 TRAK1Q9UPV9 953 aa15.03■□□□□ -0
ATL3-204ENST00000540699 NHSL1Q5SYE7 1610 aa15.03■□□□□ -0
ATL3-204ENST00000540699 ZNF316A6NFI3 1004 aaPredicted RBP15.02■□□□□ -0
ATL3-204ENST00000540699 ATF3P18847 181 aa15.02■□□□□ -0
ATL3-204ENST00000540699 PRAM1Q96QH2 718 aa15.02■□□□□ -0
ATL3-204ENST00000540699 QRICH2Q9H0J4 1663 aa15.02□□□□□ -0.01
ATL3-204ENST00000540699 MST1RQ04912 1400 aa15□□□□□ -0.01
ATL3-204ENST00000540699 SPATA31A6Q5VVP1 1343 aa14.99□□□□□ -0.01
ATL3-204ENST00000540699 BRINP3Q76B58 766 aa14.99□□□□□ -0.01
ATL3-204ENST00000540699 POGKQ9P215 609 aa14.99□□□□□ -0.01
ATL3-204ENST00000540699 RGPD8O14715 1765 aaPredicted RBP14.98□□□□□ -0.01
ATL3-204ENST00000540699 USP32Q8NFA0 1604 aa14.97□□□□□ -0.01
ATL3-204ENST00000540699 CARD11Q9BXL7 1154 aa14.97□□□□□ -0.01
ATL3-204ENST00000540699 EIF3AQ14152 1382 aaKnown RBP14.97□□□□□ -0.01
ATL3-204ENST00000540699 CENPJQ9HC77 1338 aaPredicted RBP14.96□□□□□ -0.01
ATL3-204ENST00000540699 C1orf167Q5SNV9 1468 aa14.96□□□□□ -0.01
ATL3-204ENST00000540699 SBNO2Q9Y2G9 1366 aa14.96□□□□□ -0.02
ATL3-204ENST00000540699 SAFB2Q14151 953 aaKnown RBP eCLIP14.95□□□□□ -0.02
ATL3-204ENST00000540699 ANKARQ7Z5J8 1434 aa14.94□□□□□ -0.02
ATL3-204ENST00000540699 TULP4Q9NRJ4 1543 aa14.94□□□□□ -0.02
ATL3-204ENST00000540699 MINK1Q8N4C8 1332 aaPredicted RBP14.93□□□□□ -0.02
ATL3-204ENST00000540699 ITSN1Q15811 1721 aa14.93□□□□□ -0.02
ATL3-204ENST00000540699 MEX3CQ5U5Q3 659 aaKnown RBP14.93□□□□□ -0.02
ATL3-204ENST00000540699 ZNF772Q68DY9 489 aaPredicted RBP14.93□□□□□ -0.02
ATL3-204ENST00000540699 KIF1AQ12756 1690 aa14.93□□□□□ -0.02
ATL3-204ENST00000540699 TOPAZ1Q8N9V7 1692 aa14.93□□□□□ -0.02
ATL3-204ENST00000540699 WASLO00401 505 aaPredicted RBP14.92□□□□□ -0.02
ATL3-204ENST00000540699 UPF1Q92900 1129 aaKnown RBP eCLIP14.92□□□□□ -0.02
ATL3-204ENST00000540699 ATP7BP35670 1465 aa14.9□□□□□ -0.02
ATL3-204ENST00000540699 USP47Q96K76 1375 aa14.9□□□□□ -0.02
ATL3-204ENST00000540699 HIRIP3Q9BW71 556 aaPredicted RBP14.9□□□□□ -0.02
ATL3-204ENST00000540699 PRR36Q9H6K5 1346 aa14.88□□□□□ -0.03
ATL3-204ENST00000540699 PNPLA6Q8IY17 1366 aa14.87□□□□□ -0.03
ATL3-204ENST00000540699 NUTM2BA6NNL0 878 aaPredicted RBP14.87□□□□□ -0.03
ATL3-204ENST00000540699 NUTM2EB1AL46 878 aaPredicted RBP14.87□□□□□ -0.03
ATL3-204ENST00000540699 RXRBP28702 533 aa14.87□□□□□ -0.03
ATL3-204ENST00000540699 NUTM2AQ8IVF1 878 aaPredicted RBP14.87□□□□□ -0.03
ATL3-204ENST00000540699 DDX17Q92841 729 aaKnown RBP14.87□□□□□ -0.03
ATL3-204ENST00000540699 TESK2Q96S53 571 aa14.87□□□□□ -0.03
ATL3-204ENST00000540699 ORAI2Q96SN7 254 aa14.87□□□□□ -0.03
ATL3-204ENST00000540699 LRRC59Q96AG4 307 aaKnown RBP14.86□□□□□ -0.03
ATL3-204ENST00000540699 CDK19Q9BWU1 502 aa14.86□□□□□ -0.03
ATL3-204ENST00000540699 CDK12Q9NYV4 1490 aaPredicted RBP14.85□□□□□ -0.03
ATL3-204ENST00000540699 ST20-MTHFSA0A0A6YYL1 179 aa14.85□□□□□ -0.03
ATL3-204ENST00000540699 HSPA5P11021 654 aaKnown RBP14.85□□□□□ -0.03
ATL3-204ENST00000540699 EVC2Q86UK5 1308 aa14.85□□□□□ -0.03
ATL3-204ENST00000540699 NUTM2FA1L443 756 aa14.84□□□□□ -0.03
ATL3-204ENST00000540699 EIF4G2P78344 907 aaKnown RBP eCLIP14.84□□□□□ -0.03
ATL3-204ENST00000540699 ESCO1Q5FWF5 840 aa14.84□□□□□ -0.03
ATL3-204ENST00000540699 AFF2P51816 1311 aa14.84□□□□□ -0.03
ATL3-204ENST00000540699 PXDNQ92626 1479 aa14.83□□□□□ -0.03
ATL3-204ENST00000540699 SLC24A1O60721 1099 aa14.83□□□□□ -0.04
ATL3-204ENST00000540699 NUDT16Q96DE0 195 aaKnown RBP14.83□□□□□ -0.04
ATL3-204ENST00000540699 COL22A1Q8NFW1 1626 aaPredicted RBP14.83□□□□□ -0.04
ATL3-204ENST00000540699 PUS7Q96PZ0 661 aaKnown RBP14.82□□□□□ -0.04
ATL3-204ENST00000540699 PHF8Q9UPP1 1060 aa14.82□□□□□ -0.04
ATL3-204ENST00000540699 SOS2Q07890 1332 aaPredicted RBP14.82□□□□□ -0.04
ATL3-204ENST00000540699 TRPM3Q9HCF6 1732 aaPredicted RBP14.81□□□□□ -0.04
ATL3-204ENST00000540699 CCDC61Q9Y6R9 512 aa14.81□□□□□ -0.04
ATL3-204ENST00000540699 NPHP3Q7Z494 1330 aa14.81□□□□□ -0.04
ATL3-204ENST00000540699 AKAP12Q02952 1782 aa14.8□□□□□ -0.04
ATL3-204ENST00000540699 PLEKHG3A1L390 1219 aa14.8□□□□□ -0.04
ATL3-204ENST00000540699 SRPK2P78362 688 aaKnown RBP14.8□□□□□ -0.04
ATL3-204ENST00000540699 DIEXFQ68CQ4 756 aaKnown RBP14.8□□□□□ -0.04
ATL3-204ENST00000540699 CABP2Q9NPB3 220 aa14.8□□□□□ -0.04
ATL3-204ENST00000540699 POLR3AO14802 1390 aaPredicted RBP14.8□□□□□ -0.04
ATL3-204ENST00000540699 RGS12O14924 1447 aa14.79□□□□□ -0.04
ATL3-204ENST00000540699 PPIP5K1Q6PFW1 1433 aa14.79□□□□□ -0.04
ATL3-204ENST00000540699 ATAD2Q6PL18 1390 aa14.79□□□□□ -0.04
ATL3-204ENST00000540699 C8orf37Q96NL8 207 aa14.79□□□□□ -0.04
ATL3-204ENST00000540699 MARF1Q9Y4F3 1742 aaKnown RBP14.79□□□□□ -0.04
ATL3-204ENST00000540699 FOXO3O43524 673 aa14.78□□□□□ -0.04
ATL3-204ENST00000540699 ALS2Q96Q42 1657 aa14.77□□□□□ -0.04
ATL3-204ENST00000540699 MON2Q7Z3U7 1717 aa14.77□□□□□ -0.05
ATL3-204ENST00000540699 TMF1P82094 1093 aa14.76□□□□□ -0.05
ATL3-204ENST00000540699 PMFBP1Q8TBY8 1022 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms