RNA–Protein interactions for RNA: ENST00000540550.6

TSFM-207, Transcript of Ts translation elongation factor, mitochondrial, humanhuman

TSL 2 BASIC

Gene TSFM, Length 1,935 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSFM-207ENST00000540550 HDGFP51858 240 aaKnown RBP19.86■□□□□ 0.77
TSFM-207ENST00000540550 PRAM1Q96QH2 718 aa19.86■□□□□ 0.77
TSFM-207ENST00000540550 DLC1Q96QB1 1528 aa19.86■□□□□ 0.77
TSFM-207ENST00000540550 NINLQ9Y2I6 1382 aa19.85■□□□□ 0.77
TSFM-207ENST00000540550 NRXN3Q9Y4C0 1643 aa19.85■□□□□ 0.77
TSFM-207ENST00000540550 FER1L4A9Z1Z3 1794 aa19.84■□□□□ 0.77
TSFM-207ENST00000540550 CABP2Q9NPB3 220 aa19.84■□□□□ 0.77
TSFM-207ENST00000540550 ANKRD36BQ8N2N9 1353 aa19.84■□□□□ 0.77
TSFM-207ENST00000540550 SRPK2P78362 688 aaKnown RBP19.84■□□□□ 0.77
TSFM-207ENST00000540550 MINK1Q8N4C8 1332 aaPredicted RBP19.83■□□□□ 0.77
TSFM-207ENST00000540550 ATAD2Q6PL18 1390 aa19.82■□□□□ 0.76
TSFM-207ENST00000540550 IRX6P78412 446 aaPredicted RBP19.82■□□□□ 0.76
TSFM-207ENST00000540550 ERICH6BQ5W0A0 696 aa19.82■□□□□ 0.76
TSFM-207ENST00000540550 CGNL1Q0VF96 1302 aa19.82■□□□□ 0.76
TSFM-207ENST00000540550 C3P01024 1663 aa19.81■□□□□ 0.76
TSFM-207ENST00000540550 PDE3BQ13370 1112 aa19.81■□□□□ 0.76
TSFM-207ENST00000540550 MORC1Q86VD1 984 aa19.81■□□□□ 0.76
TSFM-207ENST00000540550 ADAMTS8Q9UP79 889 aa19.8■□□□□ 0.76
TSFM-207ENST00000540550 NLRP1Q9C000 1473 aa19.8■□□□□ 0.76
TSFM-207ENST00000540550 SALL2Q9Y467 1007 aaPredicted RBP19.8■□□□□ 0.76
TSFM-207ENST00000540550 NSD2O96028 1365 aa19.79■□□□□ 0.76
TSFM-207ENST00000540550 KNDC1Q76NI1 1749 aa19.79■□□□□ 0.76
TSFM-207ENST00000540550 TMEM2Q9UHN6 1383 aa19.78■□□□□ 0.76
TSFM-207ENST00000540550 ABCC11Q96J66 1382 aa19.78■□□□□ 0.76
TSFM-207ENST00000540550 CDK19Q9BWU1 502 aa19.74■□□□□ 0.75
TSFM-207ENST00000540550 TERF2IPQ9NYB0 399 aa19.74■□□□□ 0.75
TSFM-207ENST00000540550 A0A1W2PP64 1363 aa19.74■□□□□ 0.75
TSFM-207ENST00000540550 POLR3AO14802 1390 aaPredicted RBP19.74■□□□□ 0.75
TSFM-207ENST00000540550 METP08581 1390 aa19.73■□□□□ 0.75
TSFM-207ENST00000540550 ANKRD26Q9UPS8 1709 aa19.73■□□□□ 0.75
TSFM-207ENST00000540550 CEBPAP49715 358 aaPredicted RBP19.72■□□□□ 0.75
TSFM-207ENST00000540550 WAPLQ7Z5K2 1190 aa19.72■□□□□ 0.75
TSFM-207ENST00000540550 PLEKHH1Q9ULM0 1364 aa19.71■□□□□ 0.75
TSFM-207ENST00000540550 CPS1P31327 1500 aa19.71■□□□□ 0.75
TSFM-207ENST00000540550 TNNT2P45379 298 aaPredicted RBP19.71■□□□□ 0.75
TSFM-207ENST00000540550 HDGFL2Q7Z4V5 671 aaPredicted RBP19.7■□□□□ 0.74
TSFM-207ENST00000540550 PPP4R2Q9NY27 417 aa19.7■□□□□ 0.74
TSFM-207ENST00000540550 RNF123Q5XPI4 1314 aa19.7■□□□□ 0.74
TSFM-207ENST00000540550 TECPR2O15040 1411 aa19.7■□□□□ 0.74
TSFM-207ENST00000540550 KIF20BQ96Q89 1820 aa19.7■□□□□ 0.74
TSFM-207ENST00000540550 SHPRHQ149N8 1683 aa19.7■□□□□ 0.74
TSFM-207ENST00000540550 FAM135BQ49AJ0 1406 aa19.69■□□□□ 0.74
TSFM-207ENST00000540550 PLEKHG1Q9ULL1 1385 aa19.69■□□□□ 0.74
TSFM-207ENST00000540550 PLPPR3Q6T4P5 718 aa19.68■□□□□ 0.74
TSFM-207ENST00000540550 CD163L1Q9NR16 1453 aa19.68■□□□□ 0.74
TSFM-207ENST00000540550 SIRT1Q96EB6 747 aa19.68■□□□□ 0.74
TSFM-207ENST00000540550 CFAP53Q96M91 514 aa19.68■□□□□ 0.74
TSFM-207ENST00000540550 EID1Q9Y6B2 187 aa19.67■□□□□ 0.74
TSFM-207ENST00000540550 ATP7BP35670 1465 aa19.67■□□□□ 0.74
TSFM-207ENST00000540550 TXNDC2Q86VQ3 553 aa19.66■□□□□ 0.74
TSFM-207ENST00000540550 CDCA7LQ96GN5 454 aa19.66■□□□□ 0.74
TSFM-207ENST00000540550 SLIT1O75093 1534 aa19.66■□□□□ 0.74
TSFM-207ENST00000540550 CCDC146Q8IYE0 955 aa19.66■□□□□ 0.74
TSFM-207ENST00000540550 RCAN3Q9UKA8 241 aa19.66■□□□□ 0.74
TSFM-207ENST00000540550 ADAMTS13Q76LX8 1427 aa19.66■□□□□ 0.74
TSFM-207ENST00000540550 CABP1Q9NZU7 370 aa19.65■□□□□ 0.74
TSFM-207ENST00000540550 MED14O60244 1454 aa19.65■□□□□ 0.74
TSFM-207ENST00000540550 MTHFSP49914 203 aa19.64■□□□□ 0.73
TSFM-207ENST00000540550 ARHGAP23Q9P227 1491 aa19.63■□□□□ 0.73
TSFM-207ENST00000540550 WASLO00401 505 aaPredicted RBP19.63■□□□□ 0.73
TSFM-207ENST00000540550 LTKP29376 864 aa19.63■□□□□ 0.73
TSFM-207ENST00000540550 RIMS1Q86UR5 1692 aaKnown RBP19.62■□□□□ 0.73
TSFM-207ENST00000540550 NGEFQ8N5V2 710 aa19.61■□□□□ 0.73
TSFM-207ENST00000540550 GGNBP2Q9H3C7 697 aa19.61■□□□□ 0.73
TSFM-207ENST00000540550 APAF1O14727 1248 aa19.6■□□□□ 0.73
TSFM-207ENST00000540550 RRP1P56182 461 aaKnown RBP19.6■□□□□ 0.73
TSFM-207ENST00000540550 GOLGA2Q08379 1002 aa19.6■□□□□ 0.73
TSFM-207ENST00000540550 THEMISQ8N1K5 641 aaPredicted RBP19.6■□□□□ 0.73
TSFM-207ENST00000540550 ZNF521Q96K83 1311 aa19.6■□□□□ 0.73
TSFM-207ENST00000540550 PPIP5K1Q6PFW1 1433 aa19.6■□□□□ 0.73
TSFM-207ENST00000540550 ITSN1Q15811 1721 aa19.6■□□□□ 0.73
TSFM-207ENST00000540550 FYB1O15117 783 aa19.59■□□□□ 0.73
TSFM-207ENST00000540550 ADGRB2O60241 1585 aa19.59■□□□□ 0.73
TSFM-207ENST00000540550 DIP2AQ14689 1571 aa19.59■□□□□ 0.73
TSFM-207ENST00000540550 ROBO2Q9HCK4 1378 aa19.59■□□□□ 0.73
TSFM-207ENST00000540550 CDC42BPGQ6DT37 1551 aa19.58■□□□□ 0.72
TSFM-207ENST00000540550 MON2Q7Z3U7 1717 aa19.56■□□□□ 0.72
TSFM-207ENST00000540550 CEP170BQ9Y4F5 1589 aaPredicted RBP19.56■□□□□ 0.72
TSFM-207ENST00000540550 NUDT16Q96DE0 195 aaKnown RBP19.56■□□□□ 0.72
TSFM-207ENST00000540550 AKAP12Q02952 1782 aa19.56■□□□□ 0.72
TSFM-207ENST00000540550 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.55■□□□□ 0.72
TSFM-207ENST00000540550 RUNDC1Q96C34 613 aa19.55■□□□□ 0.72
TSFM-207ENST00000540550 SLC26A8Q96RN1 970 aa19.55■□□□□ 0.72
TSFM-207ENST00000540550 EDC4Q6P2E9 1401 aaKnown RBP19.55■□□□□ 0.72
TSFM-207ENST00000540550 CPSF1Q10570 1443 aaKnown RBP19.54■□□□□ 0.72
TSFM-207ENST00000540550 ADAMTSL3P82987 1691 aa19.54■□□□□ 0.72
TSFM-207ENST00000540550 B4GALNT3Q6L9W6 998 aa19.54■□□□□ 0.72
TSFM-207ENST00000540550 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.53■□□□□ 0.72
TSFM-207ENST00000540550 TSHZ2Q9NRE2 1034 aa19.53■□□□□ 0.72
TSFM-207ENST00000540550 TBX22Q9Y458 520 aa19.53■□□□□ 0.72
TSFM-207ENST00000540550 CCDC61Q9Y6R9 512 aa19.53■□□□□ 0.72
TSFM-207ENST00000540550 PTPRUQ92729 1446 aa19.53■□□□□ 0.72
TSFM-207ENST00000540550 SLFN5Q08AF3 891 aa19.53■□□□□ 0.72
TSFM-207ENST00000540550 DUSP27Q5VZP5 1158 aa19.53■□□□□ 0.72
TSFM-207ENST00000540550 IQSEC2Q5JU85 1478 aa19.52■□□□□ 0.72
TSFM-207ENST00000540550 U2AF1L5P0DN76 240 aaPredicted RBP19.51■□□□□ 0.71
TSFM-207ENST00000540550 U2AF1Q01081 240 aaKnown RBP eCLIP19.51■□□□□ 0.71
TSFM-207ENST00000540550 COL3A1P02461 1466 aaPredicted RBP19.51■□□□□ 0.71
TSFM-207ENST00000540550 TOPAZ1Q8N9V7 1692 aa19.51■□□□□ 0.71
TSFM-207ENST00000540550 ZNF142P52746 1687 aaPredicted RBP19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms