RNA–Protein interactions for RNA: ENST00000540357.5

DNMT1-203, Transcript of DNA methyltransferase 1, humanhuman

TSL 5 BASIC

Gene DNMT1, Length 4,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-203ENST00000540357 RABEP1Q15276 862 aa16■□□□□ 0.15
DNMT1-203ENST00000540357 KDM2BQ8NHM5 1336 aa16■□□□□ 0.15
DNMT1-203ENST00000540357 K7ELQ4 463 aaPredicted RBP15.99■□□□□ 0.15
DNMT1-203ENST00000540357 IGHDP01880 384 aa15.99■□□□□ 0.15
DNMT1-203ENST00000540357 PZPP20742 1482 aa15.99■□□□□ 0.15
DNMT1-203ENST00000540357 VGFO15240 615 aaPredicted RBP15.99■□□□□ 0.15
DNMT1-203ENST00000540357 EXOSC9Q06265 439 aaKnown RBP15.99■□□□□ 0.15
DNMT1-203ENST00000540357 R3HCC1Q9Y3T6 440 aaKnown RBP15.99■□□□□ 0.15
DNMT1-203ENST00000540357 GPATCH8Q9UKJ3 1502 aaKnown RBP15.99■□□□□ 0.15
DNMT1-203ENST00000540357 TRIM6-TRIM34B2RNG4 842 aa15.98■□□□□ 0.15
DNMT1-203ENST00000540357 CFAP70Q5T0N1 1121 aa15.98■□□□□ 0.15
DNMT1-203ENST00000540357 ATF7IPQ6VMQ6 1270 aa15.98■□□□□ 0.15
DNMT1-203ENST00000540357 FOXD4L5Q5VV16 416 aaPredicted RBP15.98■□□□□ 0.15
DNMT1-203ENST00000540357 PRAG1Q86YV5 1406 aa15.98■□□□□ 0.15
DNMT1-203ENST00000540357 FOXD4L4Q8WXT5 416 aaPredicted RBP15.98■□□□□ 0.15
DNMT1-203ENST00000540357 ATP6V1DQ9Y5K8 247 aa15.98■□□□□ 0.15
DNMT1-203ENST00000540357 SAMD9Q5K651 1589 aa15.97■□□□□ 0.15
DNMT1-203ENST00000540357 CLCN1P35523 988 aa15.97■□□□□ 0.15
DNMT1-203ENST00000540357 GPRASP1Q5JY77 1395 aa15.97■□□□□ 0.15
DNMT1-203ENST00000540357 GNAI1P63096 354 aa15.97■□□□□ 0.15
DNMT1-203ENST00000540357 NOB1Q9ULX3 412 aaKnown RBP15.97■□□□□ 0.15
DNMT1-203ENST00000540357 NUP160Q12769 1436 aa15.96■□□□□ 0.15
DNMT1-203ENST00000540357 WDR62O43379 1518 aa15.96■□□□□ 0.15
DNMT1-203ENST00000540357 CWC22Q9HCG8 908 aaKnown RBP15.96■□□□□ 0.15
DNMT1-203ENST00000540357 ZMYM4Q5VZL5 1548 aa15.96■□□□□ 0.15
DNMT1-203ENST00000540357 CAVIN1Q6NZI2 390 aaKnown RBP15.96■□□□□ 0.15
DNMT1-203ENST00000540357 STK31Q9BXU1 1019 aa15.96■□□□□ 0.15
DNMT1-203ENST00000540357 ARHGEF11O15085 1522 aa15.96■□□□□ 0.14
DNMT1-203ENST00000540357 HTATSF1O43719 755 aaKnown RBP15.96■□□□□ 0.14
DNMT1-203ENST00000540357 MBD3O95983 291 aa15.96■□□□□ 0.14
DNMT1-203ENST00000540357 ZSCAN30Q86W11 494 aa15.95■□□□□ 0.14
DNMT1-203ENST00000540357 CHD1LQ86WJ1 897 aa15.95■□□□□ 0.14
DNMT1-203ENST00000540357 RAPGEF6Q8TEU7 1601 aa15.95■□□□□ 0.14
DNMT1-203ENST00000540357 ELL2O00472 640 aaPredicted RBP15.94■□□□□ 0.14
DNMT1-203ENST00000540357 NOL8Q76FK4 1167 aaKnown RBP15.94■□□□□ 0.14
DNMT1-203ENST00000540357 BLMP54132 1417 aaPredicted RBP15.94■□□□□ 0.14
DNMT1-203ENST00000540357 PER1O15534 1290 aaPredicted RBP15.94■□□□□ 0.14
DNMT1-203ENST00000540357 SCAF11Q99590 1463 aaKnown RBP15.93■□□□□ 0.14
DNMT1-203ENST00000540357 PLB1Q6P1J6 1458 aa15.93■□□□□ 0.14
DNMT1-203ENST00000540357 XRCC6P12956 609 aaKnown RBP eCLIP15.92■□□□□ 0.14
DNMT1-203ENST00000540357 TSR2Q969E8 191 aaKnown RBP15.92■□□□□ 0.14
DNMT1-203ENST00000540357 ASXL1Q8IXJ9 1541 aa15.92■□□□□ 0.14
DNMT1-203ENST00000540357 EIF2AK4Q9P2K8 1649 aaKnown RBP15.92■□□□□ 0.14
DNMT1-203ENST00000540357 FGD1P98174 961 aa15.91■□□□□ 0.14
DNMT1-203ENST00000540357 SLC4A10Q6U841 1118 aa15.91■□□□□ 0.14
DNMT1-203ENST00000540357 NUP153P49790 1475 aaKnown RBP15.91■□□□□ 0.14
DNMT1-203ENST00000540357 PLEKHH1Q9ULM0 1364 aa15.91■□□□□ 0.14
DNMT1-203ENST00000540357 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.91■□□□□ 0.14
DNMT1-203ENST00000540357 COL17A1Q9UMD9 1497 aaPredicted RBP15.9■□□□□ 0.14
DNMT1-203ENST00000540357 ZNF428Q96B54 188 aa15.9■□□□□ 0.14
DNMT1-203ENST00000540357 MCM2P49736 904 aa15.9■□□□□ 0.14
DNMT1-203ENST00000540357 NUTM2DQ5VT03 806 aaPredicted RBP15.9■□□□□ 0.14
DNMT1-203ENST00000540357 AMER1Q5JTC6 1135 aaPredicted RBP15.9■□□□□ 0.14
DNMT1-203ENST00000540357 CHMP4AQ9BY43 222 aa15.9■□□□□ 0.14
DNMT1-203ENST00000540357 ADGRL2O95490 1459 aa15.9■□□□□ 0.14
DNMT1-203ENST00000540357 PIK3C2GO75747 1445 aa15.89■□□□□ 0.14
DNMT1-203ENST00000540357 SHANK2Q9UPX8 1470 aa15.89■□□□□ 0.13
DNMT1-203ENST00000540357 PRPF40AO75400 957 aaKnown RBP15.89■□□□□ 0.13
DNMT1-203ENST00000540357 HDGFP51858 240 aaKnown RBP15.89■□□□□ 0.13
DNMT1-203ENST00000540357 TNPO1Q92973 898 aaKnown RBP15.89■□□□□ 0.13
DNMT1-203ENST00000540357 NSD3Q9BZ95 1437 aa15.89■□□□□ 0.13
DNMT1-203ENST00000540357 SLC12A5Q9H2X9 1139 aa15.89■□□□□ 0.13
DNMT1-203ENST00000540357 RILPL2Q969X0 211 aa15.88■□□□□ 0.13
DNMT1-203ENST00000540357 TESK2Q96S53 571 aa15.88■□□□□ 0.13
DNMT1-203ENST00000540357 GRIN2AQ12879 1464 aa15.88■□□□□ 0.13
DNMT1-203ENST00000540357 HMGN5P82970 282 aaKnown RBP15.88■□□□□ 0.13
DNMT1-203ENST00000540357 PDCL3Q9H2J4 239 aa15.87■□□□□ 0.13
DNMT1-203ENST00000540357 TSPY26PQ9H489 355 aa15.87■□□□□ 0.13
DNMT1-203ENST00000540357 GPATCH3Q96I76 525 aa15.87■□□□□ 0.13
DNMT1-203ENST00000540357 LETM1O95202 739 aaPredicted RBP15.87■□□□□ 0.13
DNMT1-203ENST00000540357 GGNBP2Q9H3C7 697 aa15.87■□□□□ 0.13
DNMT1-203ENST00000540357 TPM3P06753 285 aa15.86■□□□□ 0.13
DNMT1-203ENST00000540357 FAM135AQ9P2D6 1515 aa15.86■□□□□ 0.13
DNMT1-203ENST00000540357 KDM5CP41229 1560 aa15.86■□□□□ 0.13
DNMT1-203ENST00000540357 RBM10P98175 930 aaKnown RBP15.86■□□□□ 0.13
DNMT1-203ENST00000540357 MAGI3Q5TCQ9 1506 aa15.85■□□□□ 0.13
DNMT1-203ENST00000540357 TMEM57Q8N5G2 664 aa15.85■□□□□ 0.13
DNMT1-203ENST00000540357 DIAPH3Q9NSV4 1193 aa15.85■□□□□ 0.13
DNMT1-203ENST00000540357 HDAC1Q13547 482 aaPredicted RBP15.85■□□□□ 0.13
DNMT1-203ENST00000540357 ABCC11Q96J66 1382 aa15.85■□□□□ 0.13
DNMT1-203ENST00000540357 C14orf37Q86TY3 774 aa15.84■□□□□ 0.13
DNMT1-203ENST00000540357 CABP2Q9NPB3 220 aa15.84■□□□□ 0.13
DNMT1-203ENST00000540357 MINK1Q8N4C8 1332 aaPredicted RBP15.84■□□□□ 0.13
DNMT1-203ENST00000540357 HDAC5Q9UQL6 1122 aa15.84■□□□□ 0.13
DNMT1-203ENST00000540357 ABCA5Q8WWZ7 1642 aa15.84■□□□□ 0.13
DNMT1-203ENST00000540357 UQCRHLA0A096LP55 91 aa15.84■□□□□ 0.13
DNMT1-203ENST00000540357 UQCRHP07919 91 aa15.84■□□□□ 0.13
DNMT1-203ENST00000540357 COG3Q96JB2 828 aa15.84■□□□□ 0.13
DNMT1-203ENST00000540357 KDM6BO15054 1643 aa15.84■□□□□ 0.13
DNMT1-203ENST00000540357 ALDH1L2Q3SY69 923 aa15.84■□□□□ 0.13
DNMT1-203ENST00000540357 FOXD4L6Q3SYB3 417 aaPredicted RBP15.84■□□□□ 0.13
DNMT1-203ENST00000540357 FOXD4L3Q6VB84 417 aaPredicted RBP15.84■□□□□ 0.13
DNMT1-203ENST00000540357 RNF214Q8ND24 703 aa15.83■□□□□ 0.13
DNMT1-203ENST00000540357 ANO2Q9NQ90 1003 aa15.83■□□□□ 0.13
DNMT1-203ENST00000540357 PCDHB15Q9Y5E8 787 aa15.83■□□□□ 0.12
DNMT1-203ENST00000540357 SNX21Q969T3 373 aa15.83■□□□□ 0.12
DNMT1-203ENST00000540357 TMPOP42166 694 aaKnown RBP15.82■□□□□ 0.12
DNMT1-203ENST00000540357 TMEM132EQ6IEE7 984 aa15.82■□□□□ 0.12
DNMT1-203ENST00000540357 C1orf115Q9H7X2 142 aa15.82■□□□□ 0.12
DNMT1-203ENST00000540357 KIAA0556O60303 1618 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms