RNA–Protein interactions for RNA: ENST00000540159.3

BNIP3-202, Transcript of BCL2 interacting protein 3, humanhuman

TSL 1 (best)

Gene BNIP3, Length 3,066 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BNIP3-202ENST00000540159 CD109Q6YHK3 1445 aa17.65■□□□□ 0.42
BNIP3-202ENST00000540159 SEC24BO95487 1268 aa17.65■□□□□ 0.42
BNIP3-202ENST00000540159 DEPDC5O75140 1603 aa17.64■□□□□ 0.41
BNIP3-202ENST00000540159 KIF1BO60333 1816 aa17.64■□□□□ 0.41
BNIP3-202ENST00000540159 IDI1Q13907 227 aa17.63■□□□□ 0.41
BNIP3-202ENST00000540159 RUNDC1Q96C34 613 aa17.63■□□□□ 0.41
BNIP3-202ENST00000540159 ABCA9Q8IUA7 1624 aa17.63■□□□□ 0.41
BNIP3-202ENST00000540159 KIDINS220Q9ULH0 1771 aa17.63■□□□□ 0.41
BNIP3-202ENST00000540159 EFCAB6Q5THR3 1501 aa17.62■□□□□ 0.41
BNIP3-202ENST00000540159 INSRP06213 1382 aa17.62■□□□□ 0.41
BNIP3-202ENST00000540159 CGNL1Q0VF96 1302 aa17.62■□□□□ 0.41
BNIP3-202ENST00000540159 IL27Q8NEV9 243 aa17.61■□□□□ 0.41
BNIP3-202ENST00000540159 FBXO31Q5XUX0 539 aaPredicted RBP17.61■□□□□ 0.41
BNIP3-202ENST00000540159 RARSP54136 660 aaKnown RBP17.61■□□□□ 0.41
BNIP3-202ENST00000540159 NPC1L1Q9UHC9 1359 aa17.6■□□□□ 0.41
BNIP3-202ENST00000540159 MLECQ14165 292 aa17.6■□□□□ 0.41
BNIP3-202ENST00000540159 DDRGK1Q96HY6 314 aa17.6■□□□□ 0.41
BNIP3-202ENST00000540159 PCDHB15Q9Y5E8 787 aa17.6■□□□□ 0.41
BNIP3-202ENST00000540159 ZNF518AQ6AHZ1 1483 aa17.6■□□□□ 0.41
BNIP3-202ENST00000540159 CFAP53Q96M91 514 aa17.6■□□□□ 0.41
BNIP3-202ENST00000540159 VWDEQ8N2E2 1590 aa17.6■□□□□ 0.41
BNIP3-202ENST00000540159 NFKBIBQ15653 356 aa17.59■□□□□ 0.41
BNIP3-202ENST00000540159 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.59■□□□□ 0.41
BNIP3-202ENST00000540159 OSCARQ8IYS5 282 aa17.59■□□□□ 0.41
BNIP3-202ENST00000540159 POGKQ9P215 609 aa17.59■□□□□ 0.41
BNIP3-202ENST00000540159 SPRYD3Q8NCJ5 442 aa17.58■□□□□ 0.41
BNIP3-202ENST00000540159 STAG3Q9UJ98 1225 aa17.58■□□□□ 0.41
BNIP3-202ENST00000540159 MYOM2P54296 1465 aa17.58■□□□□ 0.4
BNIP3-202ENST00000540159 EVC2Q86UK5 1308 aa17.58■□□□□ 0.4
BNIP3-202ENST00000540159 PRAM1Q96QH2 718 aa17.58■□□□□ 0.4
BNIP3-202ENST00000540159 SLKQ9H2G2 1235 aaPredicted RBP17.58■□□□□ 0.4
BNIP3-202ENST00000540159 POLR3AO14802 1390 aaPredicted RBP17.57■□□□□ 0.4
BNIP3-202ENST00000540159 VGFO15240 615 aaPredicted RBP17.56■□□□□ 0.4
BNIP3-202ENST00000540159 ARAP3Q8WWN8 1544 aa17.55■□□□□ 0.4
BNIP3-202ENST00000540159 FRAT2O75474 233 aaPredicted RBP17.55■□□□□ 0.4
BNIP3-202ENST00000540159 FTSJ3Q8IY81 847 aaKnown RBP17.55■□□□□ 0.4
BNIP3-202ENST00000540159 SLC24A1O60721 1099 aa17.54■□□□□ 0.4
BNIP3-202ENST00000540159 CYB5RLQ6IPT4 315 aa17.54■□□□□ 0.4
BNIP3-202ENST00000540159 EXOSC9Q06265 439 aaKnown RBP17.54■□□□□ 0.4
BNIP3-202ENST00000540159 ARXQ96QS3 562 aa17.53■□□□□ 0.4
BNIP3-202ENST00000540159 SMC4Q9NTJ3 1288 aa17.53■□□□□ 0.4
BNIP3-202ENST00000540159 PDE3AQ14432 1141 aa17.53■□□□□ 0.4
BNIP3-202ENST00000540159 POGZQ7Z3K3 1410 aa17.52■□□□□ 0.4
BNIP3-202ENST00000540159 ADGRB3O60242 1522 aa17.52■□□□□ 0.39
BNIP3-202ENST00000540159 QRICH2Q9H0J4 1663 aa17.52■□□□□ 0.39
BNIP3-202ENST00000540159 WAPLQ7Z5K2 1190 aa17.51■□□□□ 0.39
BNIP3-202ENST00000540159 PDZRN3Q9UPQ7 1066 aa17.51■□□□□ 0.39
BNIP3-202ENST00000540159 A0A1W2PP64 1363 aa17.51■□□□□ 0.39
BNIP3-202ENST00000540159 ELL2O00472 640 aaPredicted RBP17.51■□□□□ 0.39
BNIP3-202ENST00000540159 ITPRIPQ8IWB1 547 aa17.51■□□□□ 0.39
BNIP3-202ENST00000540159 THUMPD2Q9BTF0 503 aaKnown RBP17.51■□□□□ 0.39
BNIP3-202ENST00000540159 FRMPD1Q5SYB0 1578 aa17.5■□□□□ 0.39
BNIP3-202ENST00000540159 CABP1Q9NZU7 370 aa17.5■□□□□ 0.39
BNIP3-202ENST00000540159 MAPK8IP3Q9UPT6 1336 aa17.5■□□□□ 0.39
BNIP3-202ENST00000540159 HMOX1P09601 288 aa17.5■□□□□ 0.39
BNIP3-202ENST00000540159 YEATS2Q9ULM3 1422 aa17.49■□□□□ 0.39
BNIP3-202ENST00000540159 KIAA1210Q9ULL0 1709 aa17.49■□□□□ 0.39
BNIP3-202ENST00000540159 ADGRB1O14514 1584 aa17.48■□□□□ 0.39
BNIP3-202ENST00000540159 FYB1O15117 783 aa17.48■□□□□ 0.39
BNIP3-202ENST00000540159 RIPK4P57078 832 aa17.48■□□□□ 0.39
BNIP3-202ENST00000540159 SBNO2Q9Y2G9 1366 aa17.48■□□□□ 0.39
BNIP3-202ENST00000540159 BRPF3Q9ULD4 1205 aa17.48■□□□□ 0.39
BNIP3-202ENST00000540159 MYH16Q9H6N6 1097 aa17.47■□□□□ 0.39
BNIP3-202ENST00000540159 NRXN1Q9ULB1 1477 aa17.47■□□□□ 0.39
BNIP3-202ENST00000540159 PLPPR3Q6T4P5 718 aa17.47■□□□□ 0.39
BNIP3-202ENST00000540159 SSH1Q8WYL5 1049 aa17.47■□□□□ 0.39
BNIP3-202ENST00000540159 IFT172Q9UG01 1749 aa17.47■□□□□ 0.39
BNIP3-202ENST00000540159 TMPOP42166 694 aaKnown RBP17.46■□□□□ 0.39
BNIP3-202ENST00000540159 USP19O94966 1318 aa17.46■□□□□ 0.39
BNIP3-202ENST00000540159 TULP4Q9NRJ4 1543 aa17.46■□□□□ 0.39
BNIP3-202ENST00000540159 NUTM2FA1L443 756 aa17.46■□□□□ 0.39
BNIP3-202ENST00000540159 NCKAP5LQ9HCH0 1330 aa17.46■□□□□ 0.39
BNIP3-202ENST00000540159 ANKRD36BQ8N2N9 1353 aa17.46■□□□□ 0.39
BNIP3-202ENST00000540159 ABCC3O15438 1527 aa17.46■□□□□ 0.39
BNIP3-202ENST00000540159 WDR63Q8IWG1 891 aa17.45■□□□□ 0.38
BNIP3-202ENST00000540159 CDK19Q9BWU1 502 aa17.45■□□□□ 0.38
BNIP3-202ENST00000540159 SHPRHQ149N8 1683 aa17.45■□□□□ 0.38
BNIP3-202ENST00000540159 DZIP1LQ8IYY4 767 aaKnown RBP17.45■□□□□ 0.38
BNIP3-202ENST00000540159 ZRANB1Q9UGI0 708 aa17.45■□□□□ 0.38
BNIP3-202ENST00000540159 GLI2P10070 1586 aa17.44■□□□□ 0.38
BNIP3-202ENST00000540159 TRIM27P14373 513 aa17.44■□□□□ 0.38
BNIP3-202ENST00000540159 ZKSCAN2Q63HK3 967 aa17.44■□□□□ 0.38
BNIP3-202ENST00000540159 NOB1Q9ULX3 412 aaKnown RBP17.44■□□□□ 0.38
BNIP3-202ENST00000540159 SIGLEC1Q9BZZ2 1709 aa17.44■□□□□ 0.38
BNIP3-202ENST00000540159 TRIM35Q9UPQ4 493 aa17.44■□□□□ 0.38
BNIP3-202ENST00000540159 PPLO60437 1756 aa17.44■□□□□ 0.38
BNIP3-202ENST00000540159 RPGRIP1LQ68CZ1 1315 aa17.43■□□□□ 0.38
BNIP3-202ENST00000540159 SOX12O15370 315 aa17.43■□□□□ 0.38
BNIP3-202ENST00000540159 MFAP1P55081 439 aaKnown RBP17.43■□□□□ 0.38
BNIP3-202ENST00000540159 MVPQ14764 893 aaKnown RBP17.43■□□□□ 0.38
BNIP3-202ENST00000540159 GSE1Q14687 1217 aa17.42■□□□□ 0.38
BNIP3-202ENST00000540159 PMFBP1Q8TBY8 1022 aa17.42■□□□□ 0.38
BNIP3-202ENST00000540159 C1orf115Q9H7X2 142 aa17.42■□□□□ 0.38
BNIP3-202ENST00000540159 HECW2Q9P2P5 1572 aa17.42■□□□□ 0.38
BNIP3-202ENST00000540159 PHF23Q9BUL5 403 aaPredicted RBP17.41■□□□□ 0.38
BNIP3-202ENST00000540159 TERF2IPQ9NYB0 399 aa17.41■□□□□ 0.38
BNIP3-202ENST00000540159 USP35Q9P2H5 1018 aa17.41■□□□□ 0.38
BNIP3-202ENST00000540159 DIAPH1O60610 1272 aaKnown RBP17.41■□□□□ 0.38
BNIP3-202ENST00000540159 PRKAR2BP31323 418 aa17.41■□□□□ 0.38
BNIP3-202ENST00000540159 RWDD1Q9H446 243 aaPredicted RBP17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms