RNA–Protein interactions for RNA: ENST00000540128.1

TRIM65-202, Transcript of tripartite motif containing 65, humanhuman

TSL 3

Gene TRIM65, Length 886 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM65-202ENST00000540128 PRAM1Q96QH2 718 aa31.62■■■□□ 2.65
TRIM65-202ENST00000540128 NALCNQ8IZF0 1738 aa31.59■■■□□ 2.65
TRIM65-202ENST00000540128 SCAF1Q9H7N4 1312 aaKnown RBP31.58■■■□□ 2.65
TRIM65-202ENST00000540128 POGKQ9P215 609 aa31.58■■■□□ 2.65
TRIM65-202ENST00000540128 TRPM1Q7Z4N2 1603 aa31.57■■■□□ 2.64
TRIM65-202ENST00000540128 MST1RQ04912 1400 aa31.55■■■□□ 2.64
TRIM65-202ENST00000540128 GPRASP1Q5JY77 1395 aa31.55■■■□□ 2.64
TRIM65-202ENST00000540128 ROCK2O75116 1388 aaKnown RBP31.53■■■□□ 2.64
TRIM65-202ENST00000540128 CDC42BPGQ6DT37 1551 aa31.51■■■□□ 2.64
TRIM65-202ENST00000540128 SAFB2Q14151 953 aaKnown RBP eCLIP31.5■■■□□ 2.63
TRIM65-202ENST00000540128 RALGAPBQ86X10 1494 aa31.48■■■□□ 2.63
TRIM65-202ENST00000540128 HSPA1LP34931 641 aa31.48■■■□□ 2.63
TRIM65-202ENST00000540128 ARHGEF28Q8N1W1 1705 aaKnown RBP31.48■■■□□ 2.63
TRIM65-202ENST00000540128 C1orf167Q5SNV9 1468 aa31.47■■■□□ 2.63
TRIM65-202ENST00000540128 BRINP3Q76B58 766 aa31.46■■■□□ 2.63
TRIM65-202ENST00000540128 ROBO1Q9Y6N7 1651 aa31.45■■■□□ 2.63
TRIM65-202ENST00000540128 CARD11Q9BXL7 1154 aa31.42■■■□□ 2.62
TRIM65-202ENST00000540128 MINK1Q8N4C8 1332 aaPredicted RBP31.42■■■□□ 2.62
TRIM65-202ENST00000540128 ADGRB2O60241 1585 aa31.42■■■□□ 2.62
TRIM65-202ENST00000540128 CENPJQ9HC77 1338 aaPredicted RBP31.41■■■□□ 2.62
TRIM65-202ENST00000540128 HIRIP3Q9BW71 556 aaPredicted RBP31.39■■■□□ 2.62
TRIM65-202ENST00000540128 WASLO00401 505 aaPredicted RBP31.38■■■□□ 2.61
TRIM65-202ENST00000540128 ORAI2Q96SN7 254 aa31.37■■■□□ 2.61
TRIM65-202ENST00000540128 FMN2Q9NZ56 1722 aa31.36■■■□□ 2.61
TRIM65-202ENST00000540128 EIF3AQ14152 1382 aaKnown RBP31.35■■■□□ 2.61
TRIM65-202ENST00000540128 NUTM2FA1L443 756 aa31.33■■■□□ 2.61
TRIM65-202ENST00000540128 ESCO1Q5FWF5 840 aa31.33■■■□□ 2.61
TRIM65-202ENST00000540128 ANKARQ7Z5J8 1434 aa31.32■■■□□ 2.61
TRIM65-202ENST00000540128 AHDC1Q5TGY3 1603 aaPredicted RBP31.31■■■□□ 2.6
TRIM65-202ENST00000540128 CDK19Q9BWU1 502 aa31.3■■■□□ 2.6
TRIM65-202ENST00000540128 PRR36Q9H6K5 1346 aa31.26■■■□□ 2.6
TRIM65-202ENST00000540128 TULP4Q9NRJ4 1543 aa31.26■■■□□ 2.59
TRIM65-202ENST00000540128 SBNO2Q9Y2G9 1366 aa31.26■■■□□ 2.59
TRIM65-202ENST00000540128 QRICH2Q9H0J4 1663 aa31.24■■■□□ 2.59
TRIM65-202ENST00000540128 PHLPP1O60346 1717 aa31.24■■■□□ 2.59
TRIM65-202ENST00000540128 NHSL1Q5SYE7 1610 aa31.24■■■□□ 2.59
TRIM65-202ENST00000540128 DDX17Q92841 729 aaKnown RBP31.23■■■□□ 2.59
TRIM65-202ENST00000540128 NUDT16Q96DE0 195 aaKnown RBP31.23■■■□□ 2.59
TRIM65-202ENST00000540128 PHF8Q9UPP1 1060 aa31.23■■■□□ 2.59
TRIM65-202ENST00000540128 USP32Q8NFA0 1604 aa31.23■■■□□ 2.59
TRIM65-202ENST00000540128 SOS2Q07890 1332 aaPredicted RBP31.23■■■□□ 2.59
TRIM65-202ENST00000540128 COL16A1Q07092 1604 aaPredicted RBP31.22■■■□□ 2.59
TRIM65-202ENST00000540128 NPHP3Q7Z494 1330 aa31.22■■■□□ 2.59
TRIM65-202ENST00000540128 FOXO3O43524 673 aa31.21■■■□□ 2.59
TRIM65-202ENST00000540128 EVC2Q86UK5 1308 aa31.2■■■□□ 2.58
TRIM65-202ENST00000540128 RGPD8O14715 1765 aaPredicted RBP31.2■■■□□ 2.58
TRIM65-202ENST00000540128 ST20-MTHFSA0A0A6YYL1 179 aa31.18■■■□□ 2.58
TRIM65-202ENST00000540128 LRRC59Q96AG4 307 aaKnown RBP31.18■■■□□ 2.58
TRIM65-202ENST00000540128 CCDC61Q9Y6R9 512 aa31.18■■■□□ 2.58
TRIM65-202ENST00000540128 ATP7BP35670 1465 aa31.18■■■□□ 2.58
TRIM65-202ENST00000540128 USP47Q96K76 1375 aa31.17■■■□□ 2.58
TRIM65-202ENST00000540128 KIF1AQ12756 1690 aa31.16■■■□□ 2.58
TRIM65-202ENST00000540128 SRPK2P78362 688 aaKnown RBP31.16■■■□□ 2.58
TRIM65-202ENST00000540128 TESK2Q96S53 571 aa31.16■■■□□ 2.58
TRIM65-202ENST00000540128 JCADQ9P266 1359 aa31.16■■■□□ 2.58
TRIM65-202ENST00000540128 CABP2Q9NPB3 220 aa31.15■■■□□ 2.58
TRIM65-202ENST00000540128 SLC24A1O60721 1099 aa31.14■■■□□ 2.58
TRIM65-202ENST00000540128 PLEKHG3A1L390 1219 aa31.13■■■□□ 2.57
TRIM65-202ENST00000540128 PMFBP1Q8TBY8 1022 aa31.13■■■□□ 2.57
TRIM65-202ENST00000540128 PXDNQ92626 1479 aa31.13■■■□□ 2.57
TRIM65-202ENST00000540128 KRT28Q7Z3Y7 464 aa31.1■■■□□ 2.57
TRIM65-202ENST00000540128 PUS7Q96PZ0 661 aaKnown RBP31.1■■■□□ 2.57
TRIM65-202ENST00000540128 XPCQ01831 940 aaPredicted RBP31.07■■■□□ 2.56
TRIM65-202ENST00000540128 PSME1Q06323 249 aa31.07■■■□□ 2.56
TRIM65-202ENST00000540128 POLR3AO14802 1390 aaPredicted RBP31.05■■■□□ 2.56
TRIM65-202ENST00000540128 ITSN1Q15811 1721 aa31.05■■■□□ 2.56
TRIM65-202ENST00000540128 NGDNQ8NEJ9 315 aaKnown RBP31.05■■■□□ 2.56
TRIM65-202ENST00000540128 TOPAZ1Q8N9V7 1692 aa31.05■■■□□ 2.56
TRIM65-202ENST00000540128 SPATA31A6Q5VVP1 1343 aa31.04■■■□□ 2.56
TRIM65-202ENST00000540128 SBNO1A3KN83 1393 aa31.04■■■□□ 2.56
TRIM65-202ENST00000540128 ATAD2Q6PL18 1390 aa31.04■■■□□ 2.56
TRIM65-202ENST00000540128 PNPLA6Q8IY17 1366 aa31.04■■■□□ 2.56
TRIM65-202ENST00000540128 SPATA31A3Q5VYP0 1347 aa31.02■■■□□ 2.56
TRIM65-202ENST00000540128 PPIP5K1Q6PFW1 1433 aa31.02■■■□□ 2.56
TRIM65-202ENST00000540128 CABP1Q9NZU7 370 aa31.02■■■□□ 2.56
TRIM65-202ENST00000540128 SHPRHQ149N8 1683 aa31.02■■■□□ 2.56
TRIM65-202ENST00000540128 ACEP12821 1306 aa31.01■■■□□ 2.56
TRIM65-202ENST00000540128 EIF4G2P78344 907 aaKnown RBP eCLIP31■■■□□ 2.554e-13■■■■■ 71.7
TRIM65-202ENST00000540128 TMF1P82094 1093 aa30.97■■■□□ 2.55
TRIM65-202ENST00000540128 TNS3Q68CZ2 1445 aa30.95■■■□□ 2.54
TRIM65-202ENST00000540128 HSPA5P11021 654 aaKnown RBP30.94■■■□□ 2.54
TRIM65-202ENST00000540128 DISP3Q9P2K9 1392 aa30.92■■■□□ 2.54
TRIM65-202ENST00000540128 MED1Q15648 1581 aaPredicted RBP30.92■■■□□ 2.54
TRIM65-202ENST00000540128 ZNF692Q9BU19 519 aaPredicted RBP30.92■■■□□ 2.54
TRIM65-202ENST00000540128 BRD4O60885 1362 aaPredicted RBP30.92■■■□□ 2.54
TRIM65-202ENST00000540128 TRPM3Q9HCF6 1732 aaPredicted RBP30.91■■■□□ 2.54
TRIM65-202ENST00000540128 CDCA8Q53HL2 280 aa30.91■■■□□ 2.54
TRIM65-202ENST00000540128 ARHGEF10O15013 1369 aa30.91■■■□□ 2.54
TRIM65-202ENST00000540128 COL22A1Q8NFW1 1626 aaPredicted RBP30.91■■■□□ 2.54
TRIM65-202ENST00000540128 LRP6O75581 1613 aa30.88■■■□□ 2.53
TRIM65-202ENST00000540128 SLC12A5Q9H2X9 1139 aa30.88■■■□□ 2.53
TRIM65-202ENST00000540128 CPSF1Q10570 1443 aaKnown RBP30.88■■■□□ 2.53
TRIM65-202ENST00000540128 NUTM2BA6NNL0 878 aaPredicted RBP30.86■■■□□ 2.53
TRIM65-202ENST00000540128 NUTM2EB1AL46 878 aaPredicted RBP30.86■■■□□ 2.53
TRIM65-202ENST00000540128 NUTM2AQ8IVF1 878 aaPredicted RBP30.86■■■□□ 2.53
TRIM65-202ENST00000540128 NINLQ9Y2I6 1382 aa30.86■■■□□ 2.53
TRIM65-202ENST00000540128 USP6P35125 1406 aa30.86■■■□□ 2.53
TRIM65-202ENST00000540128 SSH2Q76I76 1423 aa30.85■■■□□ 2.53
TRIM65-202ENST00000540128 PAK3O75914 559 aaPredicted RBP30.85■■■□□ 2.53
TRIM65-202ENST00000540128 TMC1Q8TDI8 760 aa30.85■■■□□ 2.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms