RNA–Protein interactions for RNA: ENST00000540103.1

NPIPB4-212, Transcript of nuclear pore complex interacting protein family member B4, humanhuman

TSL 5

Gene NPIPB4, Length 631 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4-212ENST00000540103 PIK3C2GO75747 1445 aa11.87□□□□□ -0.51
NPIPB4-212ENST00000540103 HRCP23327 699 aa11.87□□□□□ -0.51
NPIPB4-212ENST00000540103 SIRT1Q96EB6 747 aa11.87□□□□□ -0.51
NPIPB4-212ENST00000540103 PNPLA6Q8IY17 1366 aa11.86□□□□□ -0.51
NPIPB4-212ENST00000540103 NRXN1Q9ULB1 1477 aa11.86□□□□□ -0.51
NPIPB4-212ENST00000540103 PLEKHH1Q9ULM0 1364 aa11.85□□□□□ -0.51
NPIPB4-212ENST00000540103 STK26Q9P289 416 aa11.85□□□□□ -0.51
NPIPB4-212ENST00000540103 NUTM2BA6NNL0 878 aaPredicted RBP11.84□□□□□ -0.51
NPIPB4-212ENST00000540103 NUTM2EB1AL46 878 aaPredicted RBP11.84□□□□□ -0.51
NPIPB4-212ENST00000540103 CFAP70Q5T0N1 1121 aa11.84□□□□□ -0.51
NPIPB4-212ENST00000540103 NUTM2AQ8IVF1 878 aaPredicted RBP11.84□□□□□ -0.51
NPIPB4-212ENST00000540103 ZNF772Q68DY9 489 aaPredicted RBP11.83□□□□□ -0.52
NPIPB4-212ENST00000540103 YTHDC2Q9H6S0 1430 aaKnown RBP11.83□□□□□ -0.52
NPIPB4-212ENST00000540103 KNDC1Q76NI1 1749 aa11.82□□□□□ -0.52
NPIPB4-212ENST00000540103 CDC42BPGQ6DT37 1551 aa11.81□□□□□ -0.52
NPIPB4-212ENST00000540103 MEX3CQ5U5Q3 659 aaKnown RBP11.81□□□□□ -0.52
NPIPB4-212ENST00000540103 MYOM2P54296 1465 aa11.81□□□□□ -0.52
NPIPB4-212ENST00000540103 ESCO1Q5FWF5 840 aa11.8□□□□□ -0.52
NPIPB4-212ENST00000540103 AFF2P51816 1311 aa11.8□□□□□ -0.52
NPIPB4-212ENST00000540103 PXDNQ92626 1479 aa11.79□□□□□ -0.52
NPIPB4-212ENST00000540103 FOXO3O43524 673 aa11.79□□□□□ -0.52
NPIPB4-212ENST00000540103 DHX57Q6P158 1386 aaKnown RBP11.79□□□□□ -0.52
NPIPB4-212ENST00000540103 NUTM2FA1L443 756 aa11.78□□□□□ -0.52
NPIPB4-212ENST00000540103 RXRBP28702 533 aa11.78□□□□□ -0.52
NPIPB4-212ENST00000540103 NPHP3Q7Z494 1330 aa11.78□□□□□ -0.52
NPIPB4-212ENST00000540103 ADGRB1O14514 1584 aa11.77□□□□□ -0.53
NPIPB4-212ENST00000540103 FNBP4Q8N3X1 1017 aaPredicted RBP11.77□□□□□ -0.53
NPIPB4-212ENST00000540103 C8orf37Q96NL8 207 aa11.77□□□□□ -0.53
NPIPB4-212ENST00000540103 QTRT2Q9H974 415 aaKnown RBP11.77□□□□□ -0.53
NPIPB4-212ENST00000540103 COL22A1Q8NFW1 1626 aaPredicted RBP11.76□□□□□ -0.53
NPIPB4-212ENST00000540103 ADAMTS2O95450 1211 aa11.76□□□□□ -0.53
NPIPB4-212ENST00000540103 UPF1Q92900 1129 aaKnown RBP eCLIP11.76□□□□□ -0.53
NPIPB4-212ENST00000540103 STAC3Q96MF2 364 aa11.76□□□□□ -0.53
NPIPB4-212ENST00000540103 PRAM1Q96QH2 718 aa11.76□□□□□ -0.53
NPIPB4-212ENST00000540103 FMN2Q9NZ56 1722 aa11.76□□□□□ -0.53
NPIPB4-212ENST00000540103 CDK12Q9NYV4 1490 aaPredicted RBP11.76□□□□□ -0.53
NPIPB4-212ENST00000540103 RGPD8O14715 1765 aaPredicted RBP11.75□□□□□ -0.53
NPIPB4-212ENST00000540103 XPCQ01831 940 aaPredicted RBP11.75□□□□□ -0.53
NPIPB4-212ENST00000540103 TRIM26Q12899 539 aaPredicted RBP11.75□□□□□ -0.53
NPIPB4-212ENST00000540103 KDM2AQ9Y2K7 1162 aa11.75□□□□□ -0.53
NPIPB4-212ENST00000540103 DLC1Q96QB1 1528 aa11.75□□□□□ -0.53
NPIPB4-212ENST00000540103 RBM6P78332 1123 aaKnown RBP11.74□□□□□ -0.53
NPIPB4-212ENST00000540103 DCAF11Q8TEB1 546 aa11.74□□□□□ -0.53
NPIPB4-212ENST00000540103 NGLY1Q96IV0 654 aa11.74□□□□□ -0.53
NPIPB4-212ENST00000540103 SPATA31A3Q5VYP0 1347 aa11.74□□□□□ -0.53
NPIPB4-212ENST00000540103 KRT28Q7Z3Y7 464 aa11.73□□□□□ -0.53
NPIPB4-212ENST00000540103 PHF8Q9UPP1 1060 aa11.73□□□□□ -0.53
NPIPB4-212ENST00000540103 SAFB2Q14151 953 aaKnown RBP eCLIP11.72□□□□□ -0.53
NPIPB4-212ENST00000540103 TRAK1Q9UPV9 953 aa11.72□□□□□ -0.53
NPIPB4-212ENST00000540103 BCL9LQ86UU0 1499 aa11.71□□□□□ -0.53
NPIPB4-212ENST00000540103 ATRNO75882 1429 aa11.71□□□□□ -0.53
NPIPB4-212ENST00000540103 USP21Q9UK80 565 aa11.71□□□□□ -0.53
NPIPB4-212ENST00000540103 USP32Q8NFA0 1604 aa11.71□□□□□ -0.54
NPIPB4-212ENST00000540103 RGS12O14924 1447 aa11.7□□□□□ -0.54
NPIPB4-212ENST00000540103 PRR36Q9H6K5 1346 aa11.7□□□□□ -0.54
NPIPB4-212ENST00000540103 POGKQ9P215 609 aa11.7□□□□□ -0.54
NPIPB4-212ENST00000540103 KIF1AQ12756 1690 aa11.69□□□□□ -0.54
NPIPB4-212ENST00000540103 TRPC5Q9UL62 973 aaPredicted RBP11.69□□□□□ -0.54
NPIPB4-212ENST00000540103 ADGRB2O60241 1585 aa11.69□□□□□ -0.54
NPIPB4-212ENST00000540103 MARF1Q9Y4F3 1742 aaKnown RBP11.69□□□□□ -0.54
NPIPB4-212ENST00000540103 ANKARQ7Z5J8 1434 aa11.69□□□□□ -0.54
NPIPB4-212ENST00000540103 SBNO1A3KN83 1393 aa11.68□□□□□ -0.54
NPIPB4-212ENST00000540103 WASLO00401 505 aaPredicted RBP11.68□□□□□ -0.54
NPIPB4-212ENST00000540103 HIRIP3Q9BW71 556 aaPredicted RBP11.68□□□□□ -0.54
NPIPB4-212ENST00000540103 SLIT2O94813 1529 aa11.67□□□□□ -0.54
NPIPB4-212ENST00000540103 PSME1Q06323 249 aa11.67□□□□□ -0.54
NPIPB4-212ENST00000540103 PMFBP1Q8TBY8 1022 aa11.67□□□□□ -0.54
NPIPB4-212ENST00000540103 MINK1Q8N4C8 1332 aaPredicted RBP11.66□□□□□ -0.54
NPIPB4-212ENST00000540103 NBPF1Q3BBV0 1214 aa11.66□□□□□ -0.54
NPIPB4-212ENST00000540103 CABLES1Q8TDN4 633 aa11.66□□□□□ -0.54
NPIPB4-212ENST00000540103 TNS3Q68CZ2 1445 aa11.66□□□□□ -0.54
NPIPB4-212ENST00000540103 UNC5CLQ8IV45 518 aa11.65□□□□□ -0.54
NPIPB4-212ENST00000540103 GJD4Q96KN9 370 aaPredicted RBP11.65□□□□□ -0.54
NPIPB4-212ENST00000540103 PCGF6Q9BYE7 350 aa11.65□□□□□ -0.54
NPIPB4-212ENST00000540103 ARHGEF28Q8N1W1 1705 aaKnown RBP11.63□□□□□ -0.55
NPIPB4-212ENST00000540103 TRPM3Q9HCF6 1732 aaPredicted RBP11.63□□□□□ -0.55
NPIPB4-212ENST00000540103 FAM83GA6ND36 823 aa11.63□□□□□ -0.55
NPIPB4-212ENST00000540103 TULP4Q9NRJ4 1543 aa11.63□□□□□ -0.55
NPIPB4-212ENST00000540103 ONECUT3O60422 494 aaPredicted RBP11.62□□□□□ -0.55
NPIPB4-212ENST00000540103 NUDT16Q96DE0 195 aaKnown RBP11.62□□□□□ -0.55
NPIPB4-212ENST00000540103 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.62□□□□□ -0.55
NPIPB4-212ENST00000540103 KIAA1210Q9ULL0 1709 aa11.62□□□□□ -0.55
NPIPB4-212ENST00000540103 L3MBTL2Q969R5 705 aa11.61□□□□□ -0.55
NPIPB4-212ENST00000540103 SIN3AQ96ST3 1273 aa11.61□□□□□ -0.55
NPIPB4-212ENST00000540103 CDK19Q9BWU1 502 aa11.61□□□□□ -0.55
NPIPB4-212ENST00000540103 ARHGEF10O15013 1369 aa11.61□□□□□ -0.55
NPIPB4-212ENST00000540103 GLI3P10071 1580 aa11.61□□□□□ -0.55
NPIPB4-212ENST00000540103 ALS2Q96Q42 1657 aa11.61□□□□□ -0.55
NPIPB4-212ENST00000540103 ATP7BP35670 1465 aa11.6□□□□□ -0.55
NPIPB4-212ENST00000540103 RALGAPBQ86X10 1494 aa11.6□□□□□ -0.55
NPIPB4-212ENST00000540103 EIF3AQ14152 1382 aaKnown RBP11.6□□□□□ -0.55
NPIPB4-212ENST00000540103 PLEKHG3A1L390 1219 aa11.6□□□□□ -0.55
NPIPB4-212ENST00000540103 VPS72Q15906 364 aa11.6□□□□□ -0.55
NPIPB4-212ENST00000540103 ABCA3Q99758 1704 aa11.6□□□□□ -0.55
NPIPB4-212ENST00000540103 POLR3AO14802 1390 aaPredicted RBP11.58□□□□□ -0.56
NPIPB4-212ENST00000540103 GPRASP1Q5JY77 1395 aa11.58□□□□□ -0.56
NPIPB4-212ENST00000540103 LMOD2Q6P5Q4 547 aa11.58□□□□□ -0.56
NPIPB4-212ENST00000540103 NGDNQ8NEJ9 315 aaKnown RBP11.58□□□□□ -0.56
NPIPB4-212ENST00000540103 CCDC61Q9Y6R9 512 aa11.58□□□□□ -0.56
NPIPB4-212ENST00000540103 NWD2Q9ULI1 1742 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms