RNA–Protein interactions for RNA: ENST00000539934.5

DDX55-206, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 2,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-206ENST00000539934 EFCAB6Q5THR3 1501 aa16.89■□□□□ 0.29
DDX55-206ENST00000539934 MSH6P52701 1360 aa16.89■□□□□ 0.29
DDX55-206ENST00000539934 ARHGAP31Q2M1Z3 1444 aa16.88■□□□□ 0.29
DDX55-206ENST00000539934 PRDM15P57071 1507 aaPredicted RBP16.88■□□□□ 0.29
DDX55-206ENST00000539934 JCADQ9P266 1359 aa16.88■□□□□ 0.29
DDX55-206ENST00000539934 LRP6O75581 1613 aa16.87■□□□□ 0.29
DDX55-206ENST00000539934 TET3O43151 1660 aa16.87■□□□□ 0.29
DDX55-206ENST00000539934 RRP9O43818 475 aaKnown RBP16.87■□□□□ 0.29
DDX55-206ENST00000539934 NUTM2BA6NNL0 878 aaPredicted RBP16.86■□□□□ 0.29
DDX55-206ENST00000539934 NUTM2EB1AL46 878 aaPredicted RBP16.86■□□□□ 0.29
DDX55-206ENST00000539934 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.86■□□□□ 0.29
DDX55-206ENST00000539934 NUTM2AQ8IVF1 878 aaPredicted RBP16.86■□□□□ 0.29
DDX55-206ENST00000539934 ZFP91Q96JP5 570 aaPredicted RBP16.86■□□□□ 0.29
DDX55-206ENST00000539934 UNC13BO14795 1591 aa16.86■□□□□ 0.29
DDX55-206ENST00000539934 BBXQ8WY36 941 aaPredicted RBP16.85■□□□□ 0.29
DDX55-206ENST00000539934 L3MBTL2Q969R5 705 aa16.85■□□□□ 0.29
DDX55-206ENST00000539934 CHMP4BQ9H444 224 aaKnown RBP16.85■□□□□ 0.29
DDX55-206ENST00000539934 KANK1Q14678 1352 aa16.84■□□□□ 0.29
DDX55-206ENST00000539934 MIER1Q8N108 512 aa16.84■□□□□ 0.29
DDX55-206ENST00000539934 ERBINQ96RT1 1412 aa16.83■□□□□ 0.29
DDX55-206ENST00000539934 CHGAP10645 457 aaKnown RBP16.83■□□□□ 0.28
DDX55-206ENST00000539934 TMEM132AQ24JP5 1023 aa16.82■□□□□ 0.28
DDX55-206ENST00000539934 EP400Q96L91 3159 aa16.81■□□□□ 0.28
DDX55-206ENST00000539934 GTF2E1P29083 439 aaPredicted RBP16.81■□□□□ 0.28
DDX55-206ENST00000539934 COL16A1Q07092 1604 aaPredicted RBP16.8■□□□□ 0.28
DDX55-206ENST00000539934 HIRIP3Q9BW71 556 aaPredicted RBP16.8■□□□□ 0.28
DDX55-206ENST00000539934 IQGAP3Q86VI3 1631 aa16.8■□□□□ 0.28
DDX55-206ENST00000539934 NKTRP30414 1462 aaKnown RBP16.79■□□□□ 0.28
DDX55-206ENST00000539934 ZNF772Q68DY9 489 aaPredicted RBP16.79■□□□□ 0.28
DDX55-206ENST00000539934 MYO5BQ9ULV0 1848 aa16.79■□□□□ 0.28
DDX55-206ENST00000539934 RXRBP28702 533 aa16.78■□□□□ 0.28
DDX55-206ENST00000539934 FTSJ3Q8IY81 847 aaKnown RBP16.78■□□□□ 0.28
DDX55-206ENST00000539934 NWD1Q149M9 1564 aa16.77■□□□□ 0.28
DDX55-206ENST00000539934 ADGRB3O60242 1522 aa16.77■□□□□ 0.28
DDX55-206ENST00000539934 NOS1P29475 1434 aa16.77■□□□□ 0.27
DDX55-206ENST00000539934 DDX17Q92841 729 aaKnown RBP16.76■□□□□ 0.27
DDX55-206ENST00000539934 SPATA31A6Q5VVP1 1343 aa16.76■□□□□ 0.27
DDX55-206ENST00000539934 ATF3P18847 181 aa16.76■□□□□ 0.27
DDX55-206ENST00000539934 CHD2O14647 1828 aaKnown RBP16.75■□□□□ 0.27
DDX55-206ENST00000539934 IRX6P78412 446 aaPredicted RBP16.75■□□□□ 0.27
DDX55-206ENST00000539934 SLC52A1Q9NWF4 448 aa16.75■□□□□ 0.27
DDX55-206ENST00000539934 RIMS2Q9UQ26 1411 aa16.75■□□□□ 0.27
DDX55-206ENST00000539934 PRDM4Q9UKN5 801 aa16.74■□□□□ 0.27
DDX55-206ENST00000539934 AFF2P51816 1311 aa16.74■□□□□ 0.27
DDX55-206ENST00000539934 CANXP27824 592 aaKnown RBP16.73■□□□□ 0.27
DDX55-206ENST00000539934 HSP90AA2PQ14568 343 aaPredicted RBP16.73■□□□□ 0.27
DDX55-206ENST00000539934 BRINP3Q76B58 766 aa16.73■□□□□ 0.27
DDX55-206ENST00000539934 KDM5AP29375 1690 aaKnown RBP16.73■□□□□ 0.27
DDX55-206ENST00000539934 ZFYVE9O95405 1425 aa16.73■□□□□ 0.27
DDX55-206ENST00000539934 PLEKHG1Q9ULL1 1385 aa16.73■□□□□ 0.27
DDX55-206ENST00000539934 CALD1Q05682 793 aaKnown RBP16.73■□□□□ 0.27
DDX55-206ENST00000539934 HMGB1P09429 215 aaKnown RBP16.72■□□□□ 0.27
DDX55-206ENST00000539934 NBPF8Q3BBV2 869 aa16.72■□□□□ 0.27
DDX55-206ENST00000539934 SECISBP2LQ93073 1101 aaKnown RBP16.72■□□□□ 0.27
DDX55-206ENST00000539934 C8orf37Q96NL8 207 aa16.72■□□□□ 0.27
DDX55-206ENST00000539934 C19orf44Q9H6X5 657 aa16.72■□□□□ 0.27
DDX55-206ENST00000539934 DDX10Q13206 875 aaKnown RBP16.72■□□□□ 0.27
DDX55-206ENST00000539934 CADPS2Q86UW7 1296 aa16.72■□□□□ 0.27
DDX55-206ENST00000539934 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.71■□□□□ 0.27
DDX55-206ENST00000539934 LMTK2Q8IWU2 1503 aa16.71■□□□□ 0.27
DDX55-206ENST00000539934 EIF4G2P78344 907 aaKnown RBP eCLIP16.71■□□□□ 0.27
DDX55-206ENST00000539934 RTL5Q5HYW3 569 aaPredicted RBP16.71■□□□□ 0.27
DDX55-206ENST00000539934 STAC3Q96MF2 364 aa16.7■□□□□ 0.26
DDX55-206ENST00000539934 CCDC144AA2RUR9 1427 aa16.7■□□□□ 0.26
DDX55-206ENST00000539934 NCLP19338 710 aaKnown RBP16.7■□□□□ 0.26
DDX55-206ENST00000539934 AMOTL2Q9Y2J4 779 aa16.7■□□□□ 0.26
DDX55-206ENST00000539934 TBX22Q9Y458 520 aa16.7■□□□□ 0.26
DDX55-206ENST00000539934 HSPA5P11021 654 aaKnown RBP16.69■□□□□ 0.26
DDX55-206ENST00000539934 RNF216Q9NWF9 866 aaPredicted RBP16.69■□□□□ 0.26
DDX55-206ENST00000539934 ADAMTS13Q76LX8 1427 aa16.68■□□□□ 0.26
DDX55-206ENST00000539934 CNGB1Q14028 1251 aaPredicted RBP16.68■□□□□ 0.26
DDX55-206ENST00000539934 QTRT2Q9H974 415 aaKnown RBP16.68■□□□□ 0.26
DDX55-206ENST00000539934 ADAMTS2O95450 1211 aa16.67■□□□□ 0.26
DDX55-206ENST00000539934 HDGFP51858 240 aaKnown RBP16.66■□□□□ 0.26
DDX55-206ENST00000539934 TMEM131LA2VDJ0 1609 aa16.66■□□□□ 0.26
DDX55-206ENST00000539934 SHPRHQ149N8 1683 aa16.65■□□□□ 0.26
DDX55-206ENST00000539934 PTPRUQ92729 1446 aa16.65■□□□□ 0.26
DDX55-206ENST00000539934 CCDC9Q9Y3X0 531 aaKnown RBP16.65■□□□□ 0.26
DDX55-206ENST00000539934 AHDC1Q5TGY3 1603 aaPredicted RBP16.65■□□□□ 0.26
DDX55-206ENST00000539934 RGS12O14924 1447 aa16.65■□□□□ 0.26
DDX55-206ENST00000539934 CENPJQ9HC77 1338 aaPredicted RBP16.65■□□□□ 0.26
DDX55-206ENST00000539934 E9PCH4 1651 aa16.65■□□□□ 0.26
DDX55-206ENST00000539934 FAM43AQ8N2R8 423 aa16.64■□□□□ 0.25
DDX55-206ENST00000539934 POLR3GLQ9BT43 218 aa16.64■□□□□ 0.25
DDX55-206ENST00000539934 WASHC2AQ641Q2 1341 aa16.64■□□□□ 0.25
DDX55-206ENST00000539934 DIP2AQ14689 1571 aa16.63■□□□□ 0.25
DDX55-206ENST00000539934 TICAM2Q86XR7 235 aa16.63■□□□□ 0.25
DDX55-206ENST00000539934 DCAF11Q8TEB1 546 aa16.62■□□□□ 0.25
DDX55-206ENST00000539934 CNPY4Q8N129 248 aa16.62■□□□□ 0.25
DDX55-206ENST00000539934 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.62■□□□□ 0.25
DDX55-206ENST00000539934 KDM2AQ9Y2K7 1162 aa16.62■□□□□ 0.25
DDX55-206ENST00000539934 NGLY1Q96IV0 654 aa16.61■□□□□ 0.25
DDX55-206ENST00000539934 SPHKAPQ2M3C7 1700 aa16.6■□□□□ 0.25
DDX55-206ENST00000539934 RBM6P78332 1123 aaKnown RBP16.6■□□□□ 0.25
DDX55-206ENST00000539934 ASXL1Q8IXJ9 1541 aa16.6■□□□□ 0.25
DDX55-206ENST00000539934 NCOA3Q9Y6Q9 1424 aa16.6■□□□□ 0.25
DDX55-206ENST00000539934 RALGAPBQ86X10 1494 aa16.59■□□□□ 0.25
DDX55-206ENST00000539934 RGL3Q3MIN7 710 aa16.59■□□□□ 0.25
DDX55-206ENST00000539934 LRRC59Q96AG4 307 aaKnown RBP16.59■□□□□ 0.25
DDX55-206ENST00000539934 NOP58Q9Y2X3 529 aaKnown RBP16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms