RNA–Protein interactions for RNA: ENST00000539739.5

DDB1-216, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 1,624 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-216ENST00000539739 LTBP4Q8N2S1 1624 aa21.65■■□□□ 1.06
DDB1-216ENST00000539739 LRRC7Q96NW7 1537 aa21.65■■□□□ 1.06
DDB1-216ENST00000539739 SLC24A1O60721 1099 aa21.65■■□□□ 1.06
DDB1-216ENST00000539739 MINK1Q8N4C8 1332 aaPredicted RBP21.63■■□□□ 1.05
DDB1-216ENST00000539739 SBNO2Q9Y2G9 1366 aa21.61■■□□□ 1.05
DDB1-216ENST00000539739 ADGRL3Q9HAR2 1447 aa21.6■■□□□ 1.05
DDB1-216ENST00000539739 HIRIP3Q9BW71 556 aaPredicted RBP21.6■■□□□ 1.05
DDB1-216ENST00000539739 C19orf44Q9H6X5 657 aa21.6■■□□□ 1.05
DDB1-216ENST00000539739 QRICH2Q9H0J4 1663 aa21.59■■□□□ 1.05
DDB1-216ENST00000539739 MSH6P52701 1360 aa21.59■■□□□ 1.05
DDB1-216ENST00000539739 TESK2Q96S53 571 aa21.58■■□□□ 1.05
DDB1-216ENST00000539739 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.57■■□□□ 1.04
DDB1-216ENST00000539739 EVC2Q86UK5 1308 aa21.57■■□□□ 1.04
DDB1-216ENST00000539739 TMF1P82094 1093 aa21.57■■□□□ 1.04
DDB1-216ENST00000539739 WASLO00401 505 aaPredicted RBP21.55■■□□□ 1.04
DDB1-216ENST00000539739 ATF3P18847 181 aa21.55■■□□□ 1.04
DDB1-216ENST00000539739 CADPS2Q86UW7 1296 aa21.54■■□□□ 1.04
DDB1-216ENST00000539739 NALCNQ8IZF0 1738 aa21.53■■□□□ 1.04
DDB1-216ENST00000539739 ADGRB2O60241 1585 aa21.53■■□□□ 1.04
DDB1-216ENST00000539739 DCCP43146 1447 aa21.53■■□□□ 1.04
DDB1-216ENST00000539739 CDK19Q9BWU1 502 aa21.53■■□□□ 1.04
DDB1-216ENST00000539739 XIRP1Q702N8 1843 aaKnown RBP21.53■■□□□ 1.04
DDB1-216ENST00000539739 SRPK2P78362 688 aaKnown RBP21.52■■□□□ 1.04
DDB1-216ENST00000539739 CDCA8Q53HL2 280 aa21.52■■□□□ 1.04
DDB1-216ENST00000539739 CERKQ8TCT0 537 aa21.52■■□□□ 1.04
DDB1-216ENST00000539739 CDC42BPGQ6DT37 1551 aa21.51■■□□□ 1.03
DDB1-216ENST00000539739 IQSEC2Q5JU85 1478 aa21.49■■□□□ 1.03
DDB1-216ENST00000539739 PUS7Q96PZ0 661 aaKnown RBP21.48■■□□□ 1.03
DDB1-216ENST00000539739 CABP2Q9NPB3 220 aa21.48■■□□□ 1.03
DDB1-216ENST00000539739 TULP4Q9NRJ4 1543 aa21.48■■□□□ 1.03
DDB1-216ENST00000539739 DISP3Q9P2K9 1392 aa21.47■■□□□ 1.03
DDB1-216ENST00000539739 NUTM2FA1L443 756 aa21.47■■□□□ 1.03
DDB1-216ENST00000539739 TOM1O60784 492 aa21.45■■□□□ 1.02
DDB1-216ENST00000539739 NUDT16Q96DE0 195 aaKnown RBP21.44■■□□□ 1.02
DDB1-216ENST00000539739 ATAD2Q6PL18 1390 aa21.44■■□□□ 1.02
DDB1-216ENST00000539739 ANKARQ7Z5J8 1434 aa21.44■■□□□ 1.02
DDB1-216ENST00000539739 POLR3GLQ9BT43 218 aa21.44■■□□□ 1.02
DDB1-216ENST00000539739 SLAIN2Q9P270 581 aa21.44■■□□□ 1.02
DDB1-216ENST00000539739 FMN2Q9NZ56 1722 aa21.43■■□□□ 1.02
DDB1-216ENST00000539739 CCDC61Q9Y6R9 512 aa21.43■■□□□ 1.02
DDB1-216ENST00000539739 C11orf95C9JLR9 678 aaPredicted RBP21.42■■□□□ 1.02
DDB1-216ENST00000539739 MST1RQ04912 1400 aa21.42■■□□□ 1.02
DDB1-216ENST00000539739 C1orf167Q5SNV9 1468 aa21.4■■□□□ 1.02
DDB1-216ENST00000539739 PRR36Q9H6K5 1346 aa21.4■■□□□ 1.02
DDB1-216ENST00000539739 UBAP1LF5GYI3 381 aa21.4■■□□□ 1.02
DDB1-216ENST00000539739 KIF7Q2M1P5 1343 aa21.4■■□□□ 1.02
DDB1-216ENST00000539739 ZNF316A6NFI3 1004 aaPredicted RBP21.4■■□□□ 1.02
DDB1-216ENST00000539739 ESCO1Q5FWF5 840 aa21.4■■□□□ 1.02
DDB1-216ENST00000539739 ATP7BP35670 1465 aa21.39■■□□□ 1.01
DDB1-216ENST00000539739 TMC1Q8TDI8 760 aa21.38■■□□□ 1.01
DDB1-216ENST00000539739 CCDC7Q96M83 1385 aa21.37■■□□□ 1.01
DDB1-216ENST00000539739 WASHC2AQ641Q2 1341 aa21.37■■□□□ 1.01
DDB1-216ENST00000539739 CABP1Q9NZU7 370 aa21.37■■□□□ 1.01
DDB1-216ENST00000539739 NINLQ9Y2I6 1382 aa21.36■■□□□ 1.01
DDB1-216ENST00000539739 ORAI2Q96SN7 254 aa21.36■■□□□ 1.01
DDB1-216ENST00000539739 PHF8Q9UPP1 1060 aa21.36■■□□□ 1.01
DDB1-216ENST00000539739 PPIP5K1Q6PFW1 1433 aa21.36■■□□□ 1.01
DDB1-216ENST00000539739 USP32Q8NFA0 1604 aa21.35■■□□□ 1.01
DDB1-216ENST00000539739 PLEKHG3A1L390 1219 aa21.34■■□□□ 1.01
DDB1-216ENST00000539739 PMFBP1Q8TBY8 1022 aa21.34■■□□□ 1.01
DDB1-216ENST00000539739 SLC12A5Q9H2X9 1139 aa21.33■■□□□ 1.01
DDB1-216ENST00000539739 ITSN1Q15811 1721 aa21.33■■□□□ 1.01
DDB1-216ENST00000539739 BRINP3Q76B58 766 aa21.33■■□□□ 1
DDB1-216ENST00000539739 NGDNQ8NEJ9 315 aaKnown RBP21.33■■□□□ 1
DDB1-216ENST00000539739 SCAF1Q9H7N4 1312 aaKnown RBP21.32■■□□□ 1
DDB1-216ENST00000539739 RGPD8O14715 1765 aaPredicted RBP21.32■■□□□ 1
DDB1-216ENST00000539739 PIP4K2BP78356 416 aa21.32■■□□□ 1
DDB1-216ENST00000539739 TERF2IPQ9NYB0 399 aa21.31■■□□□ 1
DDB1-216ENST00000539739 HDGFL2Q7Z4V5 671 aaPredicted RBP21.3■■□□□ 1
DDB1-216ENST00000539739 TOPAZ1Q8N9V7 1692 aa21.3■■□□□ 1
DDB1-216ENST00000539739 ACEP12821 1306 aa21.29■■□□□ 1
DDB1-216ENST00000539739 ZNF692Q9BU19 519 aaPredicted RBP21.29■■□□□ 1
DDB1-216ENST00000539739 FOXO3O43524 673 aa21.28■■□□□ 1
DDB1-216ENST00000539739 KIF1AQ12756 1690 aa21.27■■□□□ 1
DDB1-216ENST00000539739 POLR3AO14802 1390 aaPredicted RBP21.27■■□□□ 1
DDB1-216ENST00000539739 PSME1Q06323 249 aa21.27■■□□□ 1
DDB1-216ENST00000539739 NPHP3Q7Z494 1330 aa21.27■■□□□ 1
DDB1-216ENST00000539739 ANKRD36BQ8N2N9 1353 aa21.26■□□□□ 0.99
DDB1-216ENST00000539739 ROBO1Q9Y6N7 1651 aa21.24■□□□□ 0.99
DDB1-216ENST00000539739 PANK3Q9H999 370 aa21.24■□□□□ 0.99
DDB1-216ENST00000539739 CPSF1Q10570 1443 aaKnown RBP21.24■□□□□ 0.99
DDB1-216ENST00000539739 MYOM1P52179 1685 aa21.23■□□□□ 0.99
DDB1-216ENST00000539739 A0A1W2PP64 1363 aa21.23■□□□□ 0.99
DDB1-216ENST00000539739 KTN1Q86UP2 1357 aaKnown RBP21.23■□□□□ 0.99
DDB1-216ENST00000539739 KRT28Q7Z3Y7 464 aa21.22■□□□□ 0.99
DDB1-216ENST00000539739 CD163L1Q9NR16 1453 aa21.22■□□□□ 0.99
DDB1-216ENST00000539739 DDX17Q92841 729 aaKnown RBP21.22■□□□□ 0.99
DDB1-216ENST00000539739 DDX10Q13206 875 aaKnown RBP21.21■□□□□ 0.99
DDB1-216ENST00000539739 BRD4O60885 1362 aaPredicted RBP21.2■□□□□ 0.98
DDB1-216ENST00000539739 USP6P35125 1406 aa21.19■□□□□ 0.98
DDB1-216ENST00000539739 XPCQ01831 940 aaPredicted RBP21.19■□□□□ 0.98
DDB1-216ENST00000539739 SOS2Q07890 1332 aaPredicted RBP21.18■□□□□ 0.98
DDB1-216ENST00000539739 PAK3O75914 559 aaPredicted RBP21.18■□□□□ 0.98
DDB1-216ENST00000539739 EDC4Q6P2E9 1401 aaKnown RBP21.17■□□□□ 0.98
DDB1-216ENST00000539739 CARD14Q9BXL6 1004 aa21.17■□□□□ 0.98
DDB1-216ENST00000539739 KNSTRNQ9Y448 316 aa21.17■□□□□ 0.98
DDB1-216ENST00000539739 AKAP12Q02952 1782 aa21.17■□□□□ 0.98
DDB1-216ENST00000539739 AHDC1Q5TGY3 1603 aaPredicted RBP21.17■□□□□ 0.98
DDB1-216ENST00000539739 NHSL1Q5SYE7 1610 aa21.16■□□□□ 0.98
DDB1-216ENST00000539739 TTC21BQ7Z4L5 1316 aa21.16■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms