RNA–Protein interactions for RNA: ENST00000539721.5

TRAF3-204, Transcript of TNF receptor associated factor 3, humanhuman

TSL 2 BASIC

Gene TRAF3, Length 1,786 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-204ENST00000539721 TULP4Q9NRJ4 1543 aa22.38■■□□□ 1.17
TRAF3-204ENST00000539721 MINK1Q8N4C8 1332 aaPredicted RBP22.37■■□□□ 1.17
TRAF3-204ENST00000539721 EVC2Q86UK5 1308 aa22.36■■□□□ 1.17
TRAF3-204ENST00000539721 PTCH1Q13635 1447 aa22.36■■□□□ 1.17
TRAF3-204ENST00000539721 STRCQ7RTU9 1775 aa22.36■■□□□ 1.17
TRAF3-204ENST00000539721 MYOM1P52179 1685 aa22.34■■□□□ 1.17
TRAF3-204ENST00000539721 KCNA6P17658 529 aa22.31■■□□□ 1.16
TRAF3-204ENST00000539721 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.31■■□□□ 1.16
TRAF3-204ENST00000539721 NWD1Q149M9 1564 aa22.3■■□□□ 1.16
TRAF3-204ENST00000539721 ADGRB2O60241 1585 aa22.28■■□□□ 1.16
TRAF3-204ENST00000539721 SRPK2P78362 688 aaKnown RBP22.28■■□□□ 1.16
TRAF3-204ENST00000539721 PUS7Q96PZ0 661 aaKnown RBP22.28■■□□□ 1.16
TRAF3-204ENST00000539721 CABP2Q9NPB3 220 aa22.27■■□□□ 1.16
TRAF3-204ENST00000539721 CDK19Q9BWU1 502 aa22.26■■□□□ 1.15
TRAF3-204ENST00000539721 MIER1Q8N108 512 aa22.25■■□□□ 1.15
TRAF3-204ENST00000539721 WASLO00401 505 aaPredicted RBP22.24■■□□□ 1.15
TRAF3-204ENST00000539721 ATAD2Q6PL18 1390 aa22.23■■□□□ 1.15
TRAF3-204ENST00000539721 PANK3Q9H999 370 aa22.23■■□□□ 1.15
TRAF3-204ENST00000539721 ANP32CO43423 234 aa22.22■■□□□ 1.15
TRAF3-204ENST00000539721 TMC1Q8TDI8 760 aa22.22■■□□□ 1.15
TRAF3-204ENST00000539721 NKTRP30414 1462 aaKnown RBP22.21■■□□□ 1.15
TRAF3-204ENST00000539721 STRCP1A6NGW2 1772 aa22.21■■□□□ 1.15
TRAF3-204ENST00000539721 NALCNQ8IZF0 1738 aa22.2■■□□□ 1.14
TRAF3-204ENST00000539721 NINLQ9Y2I6 1382 aa22.19■■□□□ 1.14
TRAF3-204ENST00000539721 SLC12A5Q9H2X9 1139 aa22.17■■□□□ 1.14
TRAF3-204ENST00000539721 PROSER2Q86WR7 435 aaPredicted RBP22.15■■□□□ 1.14
TRAF3-204ENST00000539721 DMRT2Q9Y5R5 561 aa22.15■■□□□ 1.14
TRAF3-204ENST00000539721 PER1O15534 1290 aaPredicted RBP22.15■■□□□ 1.14
TRAF3-204ENST00000539721 RBM33Q96EV2 1170 aaKnown RBP22.15■■□□□ 1.14
TRAF3-204ENST00000539721 CDC42BPGQ6DT37 1551 aa22.14■■□□□ 1.14
TRAF3-204ENST00000539721 ATP7BP35670 1465 aa22.14■■□□□ 1.14
TRAF3-204ENST00000539721 ADGRL3Q9HAR2 1447 aa22.14■■□□□ 1.13
TRAF3-204ENST00000539721 FMN2Q9NZ56 1722 aa22.14■■□□□ 1.13
TRAF3-204ENST00000539721 NUDT16Q96DE0 195 aaKnown RBP22.14■■□□□ 1.13
TRAF3-204ENST00000539721 ANKRD36BQ8N2N9 1353 aa22.13■■□□□ 1.13
TRAF3-204ENST00000539721 KNSTRNQ9Y448 316 aa22.12■■□□□ 1.13
TRAF3-204ENST00000539721 TOPAZ1Q8N9V7 1692 aa22.12■■□□□ 1.13
TRAF3-204ENST00000539721 C14orf37Q86TY3 774 aa22.12■■□□□ 1.13
TRAF3-204ENST00000539721 USP32Q8NFA0 1604 aa22.12■■□□□ 1.13
TRAF3-204ENST00000539721 PPIP5K1Q6PFW1 1433 aa22.12■■□□□ 1.13
TRAF3-204ENST00000539721 ITSN1Q15811 1721 aa22.11■■□□□ 1.13
TRAF3-204ENST00000539721 CNGB1Q14028 1251 aaPredicted RBP22.11■■□□□ 1.13
TRAF3-204ENST00000539721 CABP1Q9NZU7 370 aa22.11■■□□□ 1.13
TRAF3-204ENST00000539721 PRR36Q9H6K5 1346 aa22.1■■□□□ 1.13
TRAF3-204ENST00000539721 NUTM2FA1L443 756 aa22.1■■□□□ 1.13
TRAF3-204ENST00000539721 PRKRIP1Q9H875 184 aaPredicted RBP22.1■■□□□ 1.13
TRAF3-204ENST00000539721 CCDC61Q9Y6R9 512 aa22.1■■□□□ 1.13
TRAF3-204ENST00000539721 RGPD8O14715 1765 aaPredicted RBP22.09■■□□□ 1.13
TRAF3-204ENST00000539721 TERF2IPQ9NYB0 399 aa22.09■■□□□ 1.13
TRAF3-204ENST00000539721 A0A1W2PP64 1363 aa22.09■■□□□ 1.13
TRAF3-204ENST00000539721 NSD3Q9BZ95 1437 aa22.08■■□□□ 1.13
TRAF3-204ENST00000539721 CARD14Q9BXL6 1004 aa22.08■■□□□ 1.13
TRAF3-204ENST00000539721 CD163L1Q9NR16 1453 aa22.08■■□□□ 1.13
TRAF3-204ENST00000539721 ZNF335Q9H4Z2 1342 aaPredicted RBP22.08■■□□□ 1.12
TRAF3-204ENST00000539721 HDGFL2Q7Z4V5 671 aaPredicted RBP22.07■■□□□ 1.12
TRAF3-204ENST00000539721 TMEM94Q12767 1356 aa22.07■■□□□ 1.12
TRAF3-204ENST00000539721 KTN1Q86UP2 1357 aaKnown RBP22.07■■□□□ 1.12
TRAF3-204ENST00000539721 ANKARQ7Z5J8 1434 aa22.07■■□□□ 1.12
TRAF3-204ENST00000539721 NCOA3Q9Y6Q9 1424 aa22.06■■□□□ 1.12
TRAF3-204ENST00000539721 AKAP12Q02952 1782 aa22.05■■□□□ 1.12
TRAF3-204ENST00000539721 XIRP1Q702N8 1843 aaKnown RBP22.05■■□□□ 1.12
TRAF3-204ENST00000539721 CC2D1BQ5T0F9 858 aaKnown RBP22.04■■□□□ 1.12
TRAF3-204ENST00000539721 AEBP2Q6ZN18 517 aaPredicted RBP22.04■■□□□ 1.12
TRAF3-204ENST00000539721 AMER1Q5JTC6 1135 aaPredicted RBP22.04■■□□□ 1.12
TRAF3-204ENST00000539721 LRRC7Q96NW7 1537 aa22.02■■□□□ 1.12
TRAF3-204ENST00000539721 NPC1L1Q9UHC9 1359 aa22.02■■□□□ 1.12
TRAF3-204ENST00000539721 MON2Q7Z3U7 1717 aa22.02■■□□□ 1.12
TRAF3-204ENST00000539721 RALBP1Q15311 655 aa22.02■■□□□ 1.11
TRAF3-204ENST00000539721 C19orf44Q9H6X5 657 aa22.02■■□□□ 1.11
TRAF3-204ENST00000539721 CPSF1Q10570 1443 aaKnown RBP22.01■■□□□ 1.11
TRAF3-204ENST00000539721 CCER2I3L3R5 266 aa22.01■■□□□ 1.11
TRAF3-204ENST00000539721 PARD3Q8TEW0 1356 aa22.01■■□□□ 1.11
TRAF3-204ENST00000539721 PLEKHG3A1L390 1219 aa22■■□□□ 1.11
TRAF3-204ENST00000539721 CGNL1Q0VF96 1302 aa21.99■■□□□ 1.11
TRAF3-204ENST00000539721 DCCP43146 1447 aa21.99■■□□□ 1.11
TRAF3-204ENST00000539721 KIF20BQ96Q89 1820 aa21.98■■□□□ 1.11
TRAF3-204ENST00000539721 MSH6P52701 1360 aa21.97■■□□□ 1.11
TRAF3-204ENST00000539721 ACEP12821 1306 aa21.97■■□□□ 1.11
TRAF3-204ENST00000539721 PMFBP1Q8TBY8 1022 aa21.97■■□□□ 1.11
TRAF3-204ENST00000539721 ZNF692Q9BU19 519 aaPredicted RBP21.97■■□□□ 1.11
TRAF3-204ENST00000539721 EDC4Q6P2E9 1401 aaKnown RBP21.96■■□□□ 1.11
TRAF3-204ENST00000539721 ATF3P18847 181 aa21.96■■□□□ 1.11
TRAF3-204ENST00000539721 MYBBP1AQ9BQG0 1328 aaKnown RBP21.95■■□□□ 1.1
TRAF3-204ENST00000539721 NSD2O96028 1365 aa21.95■■□□□ 1.1
TRAF3-204ENST00000539721 NGDNQ8NEJ9 315 aaKnown RBP21.94■■□□□ 1.1
TRAF3-204ENST00000539721 ANKRD26Q9UPS8 1709 aa21.94■■□□□ 1.1
TRAF3-204ENST00000539721 POLR3AO14802 1390 aaPredicted RBP21.94■■□□□ 1.1
TRAF3-204ENST00000539721 NRKQ7Z2Y5 1582 aa21.94■■□□□ 1.1
TRAF3-204ENST00000539721 PHF8Q9UPP1 1060 aa21.92■■□□□ 1.1
TRAF3-204ENST00000539721 USP6P35125 1406 aa21.92■■□□□ 1.1
TRAF3-204ENST00000539721 C1orf167Q5SNV9 1468 aa21.92■■□□□ 1.1
TRAF3-204ENST00000539721 MST1RQ04912 1400 aa21.92■■□□□ 1.1
TRAF3-204ENST00000539721 ESCO1Q5FWF5 840 aa21.92■■□□□ 1.1
TRAF3-204ENST00000539721 CADPS2Q86UW7 1296 aa21.92■■□□□ 1.1
TRAF3-204ENST00000539721 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.92■■□□□ 1.1
TRAF3-204ENST00000539721 MORC1Q86VD1 984 aa21.9■■□□□ 1.1
TRAF3-204ENST00000539721 KIF1AQ12756 1690 aa21.9■■□□□ 1.1
TRAF3-204ENST00000539721 FYB1O15117 783 aa21.89■■□□□ 1.09
TRAF3-204ENST00000539721 GGNBP2Q9H3C7 697 aa21.89■■□□□ 1.09
TRAF3-204ENST00000539721 LTBP4Q8N2S1 1624 aa21.88■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms