RNA–Protein interactions for RNA: ENST00000539687.5

SPARC-209, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 5

Gene SPARC, Length 511 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-209ENST00000539687 MYO5BQ9ULV0 1848 aa13.64□□□□□ -0.23
SPARC-209ENST00000539687 SMG6Q86US8 1419 aaKnown RBP13.64□□□□□ -0.23
SPARC-209ENST00000539687 RIMS2Q9UQ26 1411 aa13.64□□□□□ -0.23
SPARC-209ENST00000539687 NLRP1Q9C000 1473 aa13.63□□□□□ -0.23
SPARC-209ENST00000539687 NSD2O96028 1365 aa13.63□□□□□ -0.23
SPARC-209ENST00000539687 ATAD2Q6PL18 1390 aa13.63□□□□□ -0.23
SPARC-209ENST00000539687 TNRQ92752 1358 aa13.63□□□□□ -0.23
SPARC-209ENST00000539687 ALKQ9UM73 1620 aa13.63□□□□□ -0.23
SPARC-209ENST00000539687 YTHDC2Q9H6S0 1430 aaKnown RBP13.63□□□□□ -0.23
SPARC-209ENST00000539687 CNGB1Q14028 1251 aaPredicted RBP13.62□□□□□ -0.23
SPARC-209ENST00000539687 MLECQ14165 292 aa13.62□□□□□ -0.23
SPARC-209ENST00000539687 TMEM132EQ6IEE7 984 aa13.61□□□□□ -0.23
SPARC-209ENST00000539687 BLMP54132 1417 aaPredicted RBP13.6□□□□□ -0.23
SPARC-209ENST00000539687 RNF39Q9H2S5 420 aa13.6□□□□□ -0.23
SPARC-209ENST00000539687 RIMS1Q86UR5 1692 aaKnown RBP13.59□□□□□ -0.23
SPARC-209ENST00000539687 ANKRD36BQ8N2N9 1353 aa13.59□□□□□ -0.23
SPARC-209ENST00000539687 PPP2R1AP30153 589 aa13.59□□□□□ -0.23
SPARC-209ENST00000539687 FKBP8Q14318 412 aa13.59□□□□□ -0.23
SPARC-209ENST00000539687 NUDCQ9Y266 331 aa13.59□□□□□ -0.23
SPARC-209ENST00000539687 SOCS7O14512 581 aa13.58□□□□□ -0.24
SPARC-209ENST00000539687 WDR43Q15061 677 aaKnown RBP eCLIP13.58□□□□□ -0.24
SPARC-209ENST00000539687 ILDR2Q71H61 639 aa13.58□□□□□ -0.24
SPARC-209ENST00000539687 SIRT1Q96EB6 747 aa13.58□□□□□ -0.24
SPARC-209ENST00000539687 POGKQ9P215 609 aa13.58□□□□□ -0.24
SPARC-209ENST00000539687 TULP4Q9NRJ4 1543 aa13.58□□□□□ -0.24
SPARC-209ENST00000539687 CGNL1Q0VF96 1302 aa13.58□□□□□ -0.24
SPARC-209ENST00000539687 ABCC11Q96J66 1382 aa13.58□□□□□ -0.24
SPARC-209ENST00000539687 NGEFQ8N5V2 710 aa13.57□□□□□ -0.24
SPARC-209ENST00000539687 CERKQ8TCT0 537 aa13.57□□□□□ -0.24
SPARC-209ENST00000539687 HSPA2P54652 639 aa13.56□□□□□ -0.24
SPARC-209ENST00000539687 NUTM2DQ5VT03 806 aaPredicted RBP13.56□□□□□ -0.24
SPARC-209ENST00000539687 NSD3Q9BZ95 1437 aa13.56□□□□□ -0.24
SPARC-209ENST00000539687 KNDC1Q76NI1 1749 aa13.55□□□□□ -0.24
SPARC-209ENST00000539687 TMEM2Q9UHN6 1383 aa13.55□□□□□ -0.24
SPARC-209ENST00000539687 SETD1AO15047 1707 aaKnown RBP13.54□□□□□ -0.24
SPARC-209ENST00000539687 UBR1Q8IWV7 1749 aa13.54□□□□□ -0.24
SPARC-209ENST00000539687 TERF2IPQ9NYB0 399 aa13.54□□□□□ -0.24
SPARC-209ENST00000539687 POLR3AO14802 1390 aaPredicted RBP13.54□□□□□ -0.24
SPARC-209ENST00000539687 TECPR2O15040 1411 aa13.54□□□□□ -0.24
SPARC-209ENST00000539687 FAM135BQ49AJ0 1406 aa13.54□□□□□ -0.24
SPARC-209ENST00000539687 PRAM1Q96QH2 718 aa13.53□□□□□ -0.24
SPARC-209ENST00000539687 SRPK2P78362 688 aaKnown RBP13.52□□□□□ -0.25
SPARC-209ENST00000539687 CARD14Q9BXL6 1004 aa13.52□□□□□ -0.25
SPARC-209ENST00000539687 STK26Q9P289 416 aa13.52□□□□□ -0.25
SPARC-209ENST00000539687 MED14O60244 1454 aa13.52□□□□□ -0.25
SPARC-209ENST00000539687 FER1L4A9Z1Z3 1794 aa13.51□□□□□ -0.25
SPARC-209ENST00000539687 PLEKHG1Q9ULL1 1385 aa13.51□□□□□ -0.25
SPARC-209ENST00000539687 HDGFL2Q7Z4V5 671 aaPredicted RBP13.51□□□□□ -0.25
SPARC-209ENST00000539687 MORC1Q86VD1 984 aa13.51□□□□□ -0.25
SPARC-209ENST00000539687 CFAP53Q96M91 514 aa13.51□□□□□ -0.25
SPARC-209ENST00000539687 NRXN3Q9Y4C0 1643 aa13.5□□□□□ -0.25
SPARC-209ENST00000539687 CPS1P31327 1500 aa13.5□□□□□ -0.25
SPARC-209ENST00000539687 ATP7BP35670 1465 aa13.5□□□□□ -0.25
SPARC-209ENST00000539687 SLC12A5Q9H2X9 1139 aa13.5□□□□□ -0.25
SPARC-209ENST00000539687 EID1Q9Y6B2 187 aa13.5□□□□□ -0.25
SPARC-209ENST00000539687 SLIT1O75093 1534 aa13.49□□□□□ -0.25
SPARC-209ENST00000539687 C3P01024 1663 aa13.49□□□□□ -0.25
SPARC-209ENST00000539687 CABP2Q9NPB3 220 aa13.48□□□□□ -0.25
SPARC-209ENST00000539687 DIP2AQ14689 1571 aa13.48□□□□□ -0.25
SPARC-209ENST00000539687 RNF123Q5XPI4 1314 aa13.47□□□□□ -0.25
SPARC-209ENST00000539687 ARHGAP23Q9P227 1491 aa13.47□□□□□ -0.25
SPARC-209ENST00000539687 MINK1Q8N4C8 1332 aaPredicted RBP13.46□□□□□ -0.25
SPARC-209ENST00000539687 THEMISQ8N1K5 641 aaPredicted RBP13.46□□□□□ -0.25
SPARC-209ENST00000539687 PPP4R2Q9NY27 417 aa13.46□□□□□ -0.25
SPARC-209ENST00000539687 ADAMTS8Q9UP79 889 aa13.46□□□□□ -0.25
SPARC-209ENST00000539687 A0A1W2PP64 1363 aa13.45□□□□□ -0.26
SPARC-209ENST00000539687 ANKRD26Q9UPS8 1709 aa13.45□□□□□ -0.26
SPARC-209ENST00000539687 BCANQ96GW7 911 aa13.45□□□□□ -0.26
SPARC-209ENST00000539687 CDK19Q9BWU1 502 aa13.45□□□□□ -0.26
SPARC-209ENST00000539687 SAFB2Q14151 953 aaKnown RBP eCLIP13.44□□□□□ -0.26
SPARC-209ENST00000539687 ADGRB2O60241 1585 aa13.44□□□□□ -0.26
SPARC-209ENST00000539687 ADAMTS13Q76LX8 1427 aa13.43□□□□□ -0.26
SPARC-209ENST00000539687 METP08581 1390 aa13.43□□□□□ -0.26
SPARC-209ENST00000539687 WASLO00401 505 aaPredicted RBP13.42□□□□□ -0.26
SPARC-209ENST00000539687 TXNDC2Q86VQ3 553 aa13.42□□□□□ -0.26
SPARC-209ENST00000539687 SLC4A2P04920 1241 aa13.41□□□□□ -0.26
SPARC-209ENST00000539687 TBX22Q9Y458 520 aa13.41□□□□□ -0.26
SPARC-209ENST00000539687 PIK3R4Q99570 1358 aa13.41□□□□□ -0.26
SPARC-209ENST00000539687 CD163L1Q9NR16 1453 aa13.41□□□□□ -0.26
SPARC-209ENST00000539687 EDC4Q6P2E9 1401 aaKnown RBP13.4□□□□□ -0.26
SPARC-209ENST00000539687 PNNQ9H307 717 aaKnown RBP13.4□□□□□ -0.26
SPARC-209ENST00000539687 RCAN3Q9UKA8 241 aa13.4□□□□□ -0.26
SPARC-209ENST00000539687 PTCH1Q13635 1447 aa13.39□□□□□ -0.27
SPARC-209ENST00000539687 KIF20BQ96Q89 1820 aa13.39□□□□□ -0.27
SPARC-209ENST00000539687 GOLGA2Q08379 1002 aa13.39□□□□□ -0.27
SPARC-209ENST00000539687 ZNF692Q9BU19 519 aaPredicted RBP13.39□□□□□ -0.27
SPARC-209ENST00000539687 CCDC61Q9Y6R9 512 aa13.39□□□□□ -0.27
SPARC-209ENST00000539687 STRCQ7RTU9 1775 aa13.38□□□□□ -0.27
SPARC-209ENST00000539687 CDC42BPGQ6DT37 1551 aa13.38□□□□□ -0.27
SPARC-209ENST00000539687 CEP170BQ9Y4F5 1589 aaPredicted RBP13.38□□□□□ -0.27
SPARC-209ENST00000539687 CACNB1Q02641 598 aaPredicted RBP13.38□□□□□ -0.27
SPARC-209ENST00000539687 PPIP5K1Q6PFW1 1433 aa13.38□□□□□ -0.27
SPARC-209ENST00000539687 ZNF521Q96K83 1311 aa13.38□□□□□ -0.27
SPARC-209ENST00000539687 SHPRHQ149N8 1683 aa13.37□□□□□ -0.27
SPARC-209ENST00000539687 PLEKHH1Q9ULM0 1364 aa13.37□□□□□ -0.27
SPARC-209ENST00000539687 MTHFSP49914 203 aa13.37□□□□□ -0.27
SPARC-209ENST00000539687 WAPLQ7Z5K2 1190 aa13.37□□□□□ -0.27
SPARC-209ENST00000539687 RUNDC1Q96C34 613 aa13.37□□□□□ -0.27
SPARC-209ENST00000539687 CABP1Q9NZU7 370 aa13.37□□□□□ -0.27
SPARC-209ENST00000539687 CPSF1Q10570 1443 aaKnown RBP13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms